RNA–Protein interactions for RNA: ENST00000536368.1

RPL12-205, Transcript of ribosomal protein L12, humanhuman

TSL 1 (best) BASIC

Gene RPL12, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL12-205ENST00000536368 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.18
RPL12-205ENST00000536368 ABCC9O60706 1549 aa25.78■■□□□ 1.72
RPL12-205ENST00000536368 CCDC180Q9P1Z9 1646 aa25.75■■□□□ 1.71
RPL12-205ENST00000536368 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
RPL12-205ENST00000536368 NACADO15069 1562 aa24.42■■□□□ 1.5
RPL12-205ENST00000536368 DNAJC5BQ9UF47 199 aa24.33■■□□□ 1.49
RPL12-205ENST00000536368 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
RPL12-205ENST00000536368 DCAF8L2P0C7V8 631 aa24.09■■□□□ 1.45
RPL12-205ENST00000536368 PABPN1Q86U42 306 aaKnown RBP eCLIP23.98■■□□□ 1.43
RPL12-205ENST00000536368 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
RPL12-205ENST00000536368 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
RPL12-205ENST00000536368 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
RPL12-205ENST00000536368 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
RPL12-205ENST00000536368 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
RPL12-205ENST00000536368 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
RPL12-205ENST00000536368 CC2D2AQ9P2K1 1620 aa23.32■■□□□ 1.32
RPL12-205ENST00000536368 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
RPL12-205ENST00000536368 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
RPL12-205ENST00000536368 NCAPD3P42695 1498 aa22.56■■□□□ 1.2
RPL12-205ENST00000536368 DNAJC5Q9H3Z4 198 aa22.51■■□□□ 1.19
RPL12-205ENST00000536368 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
RPL12-205ENST00000536368 CUX2O14529 1486 aa22.39■■□□□ 1.17
RPL12-205ENST00000536368 SMARCA2P51531 1590 aa22.37■■□□□ 1.17
RPL12-205ENST00000536368 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
RPL12-205ENST00000536368 SMARCA4P51532 1647 aa22.33■■□□□ 1.17
RPL12-205ENST00000536368 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
RPL12-205ENST00000536368 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
RPL12-205ENST00000536368 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
RPL12-205ENST00000536368 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
RPL12-205ENST00000536368 NESP48681 1621 aa22.11■■□□□ 1.13
RPL12-205ENST00000536368 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
RPL12-205ENST00000536368 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
RPL12-205ENST00000536368 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.11
RPL12-205ENST00000536368 PDS5BQ9NTI5 1447 aa21.92■■□□□ 1.1
RPL12-205ENST00000536368 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
RPL12-205ENST00000536368 KIF21AQ7Z4S6 1674 aa21.8■■□□□ 1.08
RPL12-205ENST00000536368 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
RPL12-205ENST00000536368 WIZO95785 1651 aa21.7■■□□□ 1.06
RPL12-205ENST00000536368 WDR62O43379 1518 aa21.67■■□□□ 1.06
RPL12-205ENST00000536368 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
RPL12-205ENST00000536368 CFTRP13569 1480 aa21.58■■□□□ 1.04
RPL12-205ENST00000536368 RSF1Q96T23 1441 aaPredicted RBP21.56■■□□□ 1.04
RPL12-205ENST00000536368 FANCD2Q9BXW9 1451 aa21.55■■□□□ 1.04
RPL12-205ENST00000536368 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
RPL12-205ENST00000536368 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
RPL12-205ENST00000536368 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
RPL12-205ENST00000536368 TRIM41Q8WV44 630 aa21.32■■□□□ 1
RPL12-205ENST00000536368 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
RPL12-205ENST00000536368 CCDC88BA6NC98 1476 aa21.24■□□□□ 0.99
RPL12-205ENST00000536368 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
RPL12-205ENST00000536368 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
RPL12-205ENST00000536368 TOPBP1Q92547 1522 aa21.13■□□□□ 0.97
RPL12-205ENST00000536368 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
RPL12-205ENST00000536368 DNMBPQ6XZF7 1577 aa21.04■□□□□ 0.96
RPL12-205ENST00000536368 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
RPL12-205ENST00000536368 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
RPL12-205ENST00000536368 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
RPL12-205ENST00000536368 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
RPL12-205ENST00000536368 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
RPL12-205ENST00000536368 ARHGEF11O15085 1522 aa20.94■□□□□ 0.94
RPL12-205ENST00000536368 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
RPL12-205ENST00000536368 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.944e-10■■■■■ 44.8
RPL12-205ENST00000536368 SOGA1O94964 1423 aa20.81■□□□□ 0.92
RPL12-205ENST00000536368 WDR97A6NE52 1622 aa20.81■□□□□ 0.92
RPL12-205ENST00000536368 CHD1O14646 1710 aa20.8■□□□□ 0.92
RPL12-205ENST00000536368 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
RPL12-205ENST00000536368 CYB5RLQ6IPT4 315 aa20.77■□□□□ 0.92
RPL12-205ENST00000536368 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
RPL12-205ENST00000536368 FBLN2P98095 1184 aa20.74■□□□□ 0.91
RPL12-205ENST00000536368 FGD5Q6ZNL6 1462 aa20.74■□□□□ 0.91
RPL12-205ENST00000536368 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
RPL12-205ENST00000536368 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
RPL12-205ENST00000536368 CUX1P39880 1505 aa20.7■□□□□ 0.9
RPL12-205ENST00000536368 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
RPL12-205ENST00000536368 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
RPL12-205ENST00000536368 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
RPL12-205ENST00000536368 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
RPL12-205ENST00000536368 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
RPL12-205ENST00000536368 SYNJ2O15056 1496 aa20.61■□□□□ 0.89
RPL12-205ENST00000536368 GAPVD1Q14C86 1478 aa20.56■□□□□ 0.88
RPL12-205ENST00000536368 ABCA10Q8WWZ4 1543 aa20.55■□□□□ 0.88
RPL12-205ENST00000536368 TRHP20396 242 aaPredicted RBP20.54■□□□□ 0.88
RPL12-205ENST00000536368 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
RPL12-205ENST00000536368 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
RPL12-205ENST00000536368 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
RPL12-205ENST00000536368 GRIN2AQ12879 1464 aa20.39■□□□□ 0.85
RPL12-205ENST00000536368 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
RPL12-205ENST00000536368 NUP160Q12769 1436 aa20.36■□□□□ 0.85
RPL12-205ENST00000536368 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
RPL12-205ENST00000536368 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
RPL12-205ENST00000536368 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
RPL12-205ENST00000536368 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
RPL12-205ENST00000536368 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
RPL12-205ENST00000536368 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
RPL12-205ENST00000536368 SHROOM2Q13796 1616 aa20.25■□□□□ 0.83
RPL12-205ENST00000536368 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
RPL12-205ENST00000536368 JPH4Q96JJ6 628 aa20.13■□□□□ 0.81
RPL12-205ENST00000536368 PRG4Q92954 1404 aaPredicted RBP20.12■□□□□ 0.81
RPL12-205ENST00000536368 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
RPL12-205ENST00000536368 RUSC2Q8N2Y8 1516 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms