RNA–Protein interactions for RNA: ENST00000426053.5

APOL1-206, Transcript of apolipoprotein L1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene APOL1, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-206ENST00000426053 NISCHQ9Y2I1 1504 aa20.95■□□□□ 0.94
APOL1-206ENST00000426053 SLC24A1O60721 1099 aa18.95■□□□□ 0.62
APOL1-206ENST00000426053 CCDC180Q9P1Z9 1646 aa18.93■□□□□ 0.62
APOL1-206ENST00000426053 MYO15BQ96JP2 1530 aa17.79■□□□□ 0.44
APOL1-206ENST00000426053 DCAF1Q9Y4B6 1507 aa17.7■□□□□ 0.42
APOL1-206ENST00000426053 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
APOL1-206ENST00000426053 ABCC9O60706 1549 aa17.56■□□□□ 0.4
APOL1-206ENST00000426053 NACADO15069 1562 aa17.56■□□□□ 0.4
APOL1-206ENST00000426053 RB1CC1Q8TDY2 1594 aa17.44■□□□□ 0.38
APOL1-206ENST00000426053 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
APOL1-206ENST00000426053 MYT1Q01538 1121 aa17.32■□□□□ 0.36
APOL1-206ENST00000426053 PRKCSHP14314 528 aaPredicted RBP17.29■□□□□ 0.36
APOL1-206ENST00000426053 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
APOL1-206ENST00000426053 UNC13AQ9UPW8 1703 aa17.19■□□□□ 0.34
APOL1-206ENST00000426053 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
APOL1-206ENST00000426053 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
APOL1-206ENST00000426053 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
APOL1-206ENST00000426053 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
APOL1-206ENST00000426053 APLP2Q06481 763 aa17.01■□□□□ 0.31
APOL1-206ENST00000426053 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
APOL1-206ENST00000426053 ERICH6Q7L0X2 663 aa16.87■□□□□ 0.29
APOL1-206ENST00000426053 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
APOL1-206ENST00000426053 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
APOL1-206ENST00000426053 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
APOL1-206ENST00000426053 DCAF8L2P0C7V8 631 aa16.6■□□□□ 0.25
APOL1-206ENST00000426053 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
APOL1-206ENST00000426053 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
APOL1-206ENST00000426053 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
APOL1-206ENST00000426053 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
APOL1-206ENST00000426053 CC2D2AQ9P2K1 1620 aa16.22■□□□□ 0.19
APOL1-206ENST00000426053 TIMELESSQ9UNS1 1208 aa16.22■□□□□ 0.19
APOL1-206ENST00000426053 HMGXB3Q12766 1538 aa16.18■□□□□ 0.18
APOL1-206ENST00000426053 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
APOL1-206ENST00000426053 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.185e-7■■■□□ 19.1
APOL1-206ENST00000426053 SMARCA2P51531 1590 aa16.16■□□□□ 0.18
APOL1-206ENST00000426053 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
APOL1-206ENST00000426053 ARXQ96QS3 562 aa16.11■□□□□ 0.17
APOL1-206ENST00000426053 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
APOL1-206ENST00000426053 AMER1Q5JTC6 1135 aaPredicted RBP16.07■□□□□ 0.16
APOL1-206ENST00000426053 CECR2Q9BXF3 1484 aa16.05■□□□□ 0.16
APOL1-206ENST00000426053 ATAD2BQ9ULI0 1458 aa16.02■□□□□ 0.15
APOL1-206ENST00000426053 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
APOL1-206ENST00000426053 KCNA4P22459 653 aa16■□□□□ 0.15
APOL1-206ENST00000426053 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
APOL1-206ENST00000426053 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
APOL1-206ENST00000426053 TULP1O00294 542 aaPredicted RBP15.94■□□□□ 0.14
APOL1-206ENST00000426053 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
APOL1-206ENST00000426053 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
APOL1-206ENST00000426053 TOP2AP11388 1531 aaKnown RBP15.87■□□□□ 0.13
APOL1-206ENST00000426053 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
APOL1-206ENST00000426053 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
APOL1-206ENST00000426053 WIZO95785 1651 aa15.85■□□□□ 0.13
APOL1-206ENST00000426053 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
APOL1-206ENST00000426053 BAZ1BQ9UIG0 1483 aaKnown RBP15.79■□□□□ 0.12
APOL1-206ENST00000426053 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
APOL1-206ENST00000426053 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
APOL1-206ENST00000426053 BCL11AQ9H165 835 aa15.67■□□□□ 0.1
APOL1-206ENST00000426053 TAOK2Q9UL54 1235 aa15.65■□□□□ 0.1
APOL1-206ENST00000426053 PODXL2Q9NZ53 605 aa15.65■□□□□ 0.1
APOL1-206ENST00000426053 HOMEZQ8IX15 550 aa15.64■□□□□ 0.09
APOL1-206ENST00000426053 CFTRP13569 1480 aa15.54■□□□□ 0.08
APOL1-206ENST00000426053 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
APOL1-206ENST00000426053 TPRNQ4KMQ1 711 aa15.48■□□□□ 0.07
APOL1-206ENST00000426053 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
APOL1-206ENST00000426053 HRCP23327 699 aa15.45■□□□□ 0.06
APOL1-206ENST00000426053 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
APOL1-206ENST00000426053 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
APOL1-206ENST00000426053 WDR62O43379 1518 aa15.39■□□□□ 0.05
APOL1-206ENST00000426053 FAM9AQ8IZU1 332 aaPredicted RBP15.37■□□□□ 0.05
APOL1-206ENST00000426053 CUX2O14529 1486 aa15.36■□□□□ 0.05
APOL1-206ENST00000426053 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
APOL1-206ENST00000426053 NESP48681 1621 aa15.31■□□□□ 0.04
APOL1-206ENST00000426053 WDR97A6NE52 1622 aa15.3■□□□□ 0.04
APOL1-206ENST00000426053 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.04
APOL1-206ENST00000426053 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
APOL1-206ENST00000426053 AEBP2Q6ZN18 517 aaPredicted RBP15.26■□□□□ 0.03
APOL1-206ENST00000426053 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
APOL1-206ENST00000426053 BCANQ96GW7 911 aa15.25■□□□□ 0.03
APOL1-206ENST00000426053 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
APOL1-206ENST00000426053 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
APOL1-206ENST00000426053 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
APOL1-206ENST00000426053 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
APOL1-206ENST00000426053 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
APOL1-206ENST00000426053 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.02
APOL1-206ENST00000426053 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
APOL1-206ENST00000426053 C14orf37Q86TY3 774 aa15.15■□□□□ 0.02
APOL1-206ENST00000426053 TARBP1Q13395 1621 aaKnown RBP15.11■□□□□ 0.01
APOL1-206ENST00000426053 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
APOL1-206ENST00000426053 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
APOL1-206ENST00000426053 TOPBP1Q92547 1522 aa15.1■□□□□ 0.01
APOL1-206ENST00000426053 PPARGC1BQ86YN6 1023 aaKnown RBP15.08■□□□□ 0
APOL1-206ENST00000426053 CUX1P39880 1505 aa15.06■□□□□ 0
APOL1-206ENST00000426053 IFT140Q96RY7 1462 aa15.02■□□□□ -0
APOL1-206ENST00000426053 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
APOL1-206ENST00000426053 LOC105371045A0A1W2PR82 267 aa14.99□□□□□ -0.01
APOL1-206ENST00000426053 ABCA5Q8WWZ7 1642 aa14.98□□□□□ -0.01
APOL1-206ENST00000426053 PDIA4P13667 645 aaKnown RBP14.97□□□□□ -0.01
APOL1-206ENST00000426053 SYNJ1O43426 1573 aa14.97□□□□□ -0.01
APOL1-206ENST00000426053 POLA1P09884 1462 aaPredicted RBP14.94□□□□□ -0.02
APOL1-206ENST00000426053 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms