RNA–Protein interactions for RNA: ENST00000264160.8

R3HDM1-201, Transcript of R3H domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene R3HDM1, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-201ENST00000264160 NISCHQ9Y2I1 1504 aa10.74□□□□□ -0.69
R3HDM1-201ENST00000264160 CCDC180Q9P1Z9 1646 aa9.32□□□□□ -0.92
R3HDM1-201ENST00000264160 ZCCHC6Q5VYS8 1495 aaKnown RBP9.03□□□□□ -0.96
R3HDM1-201ENST00000264160 DCAF8L2P0C7V8 631 aa8.94□□□□□ -0.98
R3HDM1-201ENST00000264160 SHROOM4Q9ULL8 1493 aa8.92□□□□□ -0.98
R3HDM1-201ENST00000264160 ABCC9O60706 1549 aa8.86□□□□□ -0.99
R3HDM1-201ENST00000264160 DCAF1Q9Y4B6 1507 aa8.81□□□□□ -1
R3HDM1-201ENST00000264160 SCRIBQ14160 1630 aa8.68□□□□□ -1.02
R3HDM1-201ENST00000264160 MYO15BQ96JP2 1530 aa8.66□□□□□ -1.02
R3HDM1-201ENST00000264160 NACADO15069 1562 aa8.65□□□□□ -1.02
R3HDM1-201ENST00000264160 RB1CC1Q8TDY2 1594 aa8.59□□□□□ -1.03
R3HDM1-201ENST00000264160 SUPT5HO00267 1087 aaKnown RBP8.57□□□□□ -1.04
R3HDM1-201ENST00000264160 UNC13AQ9UPW8 1703 aa8.51□□□□□ -1.05
R3HDM1-201ENST00000264160 CECR2Q9BXF3 1484 aa8.39□□□□□ -1.07
R3HDM1-201ENST00000264160 PABPN1Q86U42 306 aaKnown RBP eCLIP8.38□□□□□ -1.07
R3HDM1-201ENST00000264160 BICRAQ9NZM4 1560 aa8.37□□□□□ -1.07
R3HDM1-201ENST00000264160 RSF1Q96T23 1441 aaPredicted RBP8.36□□□□□ -1.07
R3HDM1-201ENST00000264160 MROH2BQ7Z745 1585 aa8.34□□□□□ -1.07
R3HDM1-201ENST00000264160 WIZO95785 1651 aa8.3□□□□□ -1.08
R3HDM1-201ENST00000264160 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-201ENST00000264160 SMARCA4P51532 1647 aa8.27□□□□□ -1.09
R3HDM1-201ENST00000264160 CHIC1Q5VXU3 224 aa8.17□□□□□ -1.1
R3HDM1-201ENST00000264160 TOP2AP11388 1531 aaKnown RBP8.15□□□□□ -1.1
R3HDM1-201ENST00000264160 PEG3Q9GZU2 1588 aa8.11□□□□□ -1.11
R3HDM1-201ENST00000264160 EIF4G1Q04637 1599 aaKnown RBP8.11□□□□□ -1.11
R3HDM1-201ENST00000264160 SMARCA2P51531 1590 aa8.1□□□□□ -1.11
R3HDM1-201ENST00000264160 ATAD2BQ9ULI0 1458 aa8.09□□□□□ -1.11
R3HDM1-201ENST00000264160 CCDC88BA6NC98 1476 aa8.09□□□□□ -1.11
R3HDM1-201ENST00000264160 FAM9AQ8IZU1 332 aaPredicted RBP8.07□□□□□ -1.12
R3HDM1-201ENST00000264160 BAZ1BQ9UIG0 1483 aaKnown RBP8.07□□□□□ -1.12
R3HDM1-201ENST00000264160 CC2D2AQ9P2K1 1620 aa8□□□□□ -1.13
R3HDM1-201ENST00000264160 TRIM41Q8WV44 630 aa8□□□□□ -1.13
R3HDM1-201ENST00000264160 ABCC8Q09428 1581 aa8□□□□□ -1.13
R3HDM1-201ENST00000264160 HMGXB3Q12766 1538 aa7.99□□□□□ -1.13
R3HDM1-201ENST00000264160 NCAPD3P42695 1498 aa7.98□□□□□ -1.13
R3HDM1-201ENST00000264160 LOC105371045A0A1W2PR82 267 aa7.93□□□□□ -1.14
R3HDM1-201ENST00000264160 EHMT2Q96KQ7 1210 aa7.89□□□□□ -1.15
R3HDM1-201ENST00000264160 SYNJ1O43426 1573 aa7.88□□□□□ -1.15
R3HDM1-201ENST00000264160 WRNQ14191 1432 aaPredicted RBP eCLIP7.86□□□□□ -1.15
R3HDM1-201ENST00000264160 PRDM2Q13029 1718 aa7.84□□□□□ -1.15
R3HDM1-201ENST00000264160 DNAJC5BQ9UF47 199 aa7.84□□□□□ -1.15
R3HDM1-201ENST00000264160 CFTRP13569 1480 aa7.84□□□□□ -1.15
R3HDM1-201ENST00000264160 SOGA1O94964 1423 aa7.83□□□□□ -1.16
R3HDM1-201ENST00000264160 RUSC2Q8N2Y8 1516 aa7.82□□□□□ -1.16
R3HDM1-201ENST00000264160 NESP48681 1621 aa7.8□□□□□ -1.16
R3HDM1-201ENST00000264160 CADPSQ9ULU8 1353 aa7.8□□□□□ -1.16
R3HDM1-201ENST00000264160 TOP2BQ02880 1626 aa7.8□□□□□ -1.16
R3HDM1-201ENST00000264160 BIVM-ERCC5R4GMW8 1640 aa7.79□□□□□ -1.16
R3HDM1-201ENST00000264160 CUX1P39880 1505 aa7.79□□□□□ -1.16
R3HDM1-201ENST00000264160 APLP2Q06481 763 aa7.79□□□□□ -1.16
R3HDM1-201ENST00000264160 FANCD2Q9BXW9 1451 aa7.75□□□□□ -1.17
R3HDM1-201ENST00000264160 LAMC3Q9Y6N6 1575 aa7.72□□□□□ -1.17
R3HDM1-201ENST00000264160 KIF21AQ7Z4S6 1674 aa7.72□□□□□ -1.17
R3HDM1-201ENST00000264160 CSRNP3Q8WYN3 585 aa7.71□□□□□ -1.17
R3HDM1-201ENST00000264160 EEA1Q15075 1411 aa7.71□□□□□ -1.18
R3HDM1-201ENST00000264160 FGD5Q6ZNL6 1462 aa7.69□□□□□ -1.18
R3HDM1-201ENST00000264160 CEP164Q9UPV0 1460 aa7.69□□□□□ -1.18
R3HDM1-201ENST00000264160 DNMBPQ6XZF7 1577 aa7.67□□□□□ -1.18
R3HDM1-201ENST00000264160 TOPBP1Q92547 1522 aa7.67□□□□□ -1.18
R3HDM1-201ENST00000264160 KIF21BO75037 1637 aa7.67□□□□□ -1.18
R3HDM1-201ENST00000264160 GOLGA3Q08378 1498 aa7.67□□□□□ -1.18
R3HDM1-201ENST00000264160 UBTFP17480 764 aaKnown RBP7.66□□□□□ -1.18
R3HDM1-201ENST00000264160 URB2Q14146 1524 aaKnown RBP7.66□□□□□ -1.18
R3HDM1-201ENST00000264160 RAPGEF2Q9Y4G8 1499 aa7.66□□□□□ -1.18
R3HDM1-201ENST00000264160 RAD54L2Q9Y4B4 1467 aa7.65□□□□□ -1.18
R3HDM1-201ENST00000264160 CUX2O14529 1486 aa7.65□□□□□ -1.18
R3HDM1-201ENST00000264160 PDS5BQ9NTI5 1447 aa7.65□□□□□ -1.18
R3HDM1-201ENST00000264160 POLA1P09884 1462 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-201ENST00000264160 CEP162Q5TB80 1403 aa7.64□□□□□ -1.19
R3HDM1-201ENST00000264160 KIF27Q86VH2 1401 aa7.64□□□□□ -1.19
R3HDM1-201ENST00000264160 TNIKQ9UKE5 1360 aa7.63□□□□□ -1.19
R3HDM1-201ENST00000264160 RANGAP1P46060 587 aaPredicted RBP7.62□□□□□ -1.19
R3HDM1-201ENST00000264160 PPARGC1BQ86YN6 1023 aaKnown RBP7.61□□□□□ -1.19
R3HDM1-201ENST00000264160 WDR97A6NE52 1622 aa7.61□□□□□ -1.19
R3HDM1-201ENST00000264160 PCGF6Q9BYE7 350 aa7.6□□□□□ -1.19
R3HDM1-201ENST00000264160 PRXQ9BXM0 1461 aa7.6□□□□□ -1.19
R3HDM1-201ENST00000264160 ERICH3Q5RHP9 1530 aa7.59□□□□□ -1.19
R3HDM1-201ENST00000264160 ABCA10Q8WWZ4 1543 aa7.59□□□□□ -1.2
R3HDM1-201ENST00000264160 MRC2Q9UBG0 1479 aa7.58□□□□□ -1.2
R3HDM1-201ENST00000264160 IGF1RP08069 1367 aa7.58□□□□□ -1.2
R3HDM1-201ENST00000264160 ERCC6Q03468 1493 aa7.57□□□□□ -1.2
R3HDM1-201ENST00000264160 CLIP1P30622 1438 aa7.56□□□□□ -1.2
R3HDM1-201ENST00000264160 TDRD9Q8NDG6 1382 aaKnown RBP7.56□□□□□ -1.2
R3HDM1-201ENST00000264160 TARBP1Q13395 1621 aaKnown RBP7.56□□□□□ -1.2
R3HDM1-201ENST00000264160 TTBK1Q5TCY1 1321 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-201ENST00000264160 ABCA5Q8WWZ7 1642 aa7.55□□□□□ -1.2
R3HDM1-201ENST00000264160 CARMIL1Q5VZK9 1371 aa7.54□□□□□ -1.2
R3HDM1-201ENST00000264160 WDR62O43379 1518 aa7.54□□□□□ -1.2
R3HDM1-201ENST00000264160 THOC2Q8NI27 1593 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-201ENST00000264160 PBRM1Q86U86 1689 aa7.52□□□□□ -1.21
R3HDM1-201ENST00000264160 GAPVD1Q14C86 1478 aa7.52□□□□□ -1.21
R3HDM1-201ENST00000264160 TRIM26Q12899 539 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-201ENST00000264160 CUL7Q14999 1698 aa7.52□□□□□ -1.21
R3HDM1-201ENST00000264160 AQRO60306 1485 aaKnown RBP eCLIP7.51□□□□□ -1.21
R3HDM1-201ENST00000264160 ARAP1Q96P48 1450 aa7.5□□□□□ -1.21
R3HDM1-201ENST00000264160 ZNF608Q9ULD9 1512 aaPredicted RBP7.5□□□□□ -1.21
R3HDM1-201ENST00000264160 CTTNBP2Q8WZ74 1663 aa7.49□□□□□ -1.21
R3HDM1-201ENST00000264160 ATP1B4Q9UN42 357 aaPredicted RBP7.48□□□□□ -1.21
R3HDM1-201ENST00000264160 VPS8Q8N3P4 1428 aa7.48□□□□□ -1.21
R3HDM1-201ENST00000264160 ARHGAP35Q9NRY4 1499 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms