RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 NISCHQ9Y2I1 1504 aa20.29■□□□□ 0.84
CHRNB1-205ENST00000573209 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
CHRNB1-205ENST00000573209 MYT1Q01538 1121 aa18.77■□□□□ 0.6
CHRNB1-205ENST00000573209 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.48
CHRNB1-205ENST00000573209 HRCP23327 699 aa17.51■□□□□ 0.39
CHRNB1-205ENST00000573209 CCDC180Q9P1Z9 1646 aa17.4■□□□□ 0.38
CHRNB1-205ENST00000573209 PRKCSHP14314 528 aaPredicted RBP17.35■□□□□ 0.37
CHRNB1-205ENST00000573209 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
CHRNB1-205ENST00000573209 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
CHRNB1-205ENST00000573209 ERICH6Q7L0X2 663 aa17.18■□□□□ 0.34
CHRNB1-205ENST00000573209 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
CHRNB1-205ENST00000573209 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
CHRNB1-205ENST00000573209 APLP2Q06481 763 aa17.05■□□□□ 0.32
CHRNB1-205ENST00000573209 BCL11AQ9H165 835 aa17■□□□□ 0.31
CHRNB1-205ENST00000573209 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
CHRNB1-205ENST00000573209 ABCC9O60706 1549 aa16.81■□□□□ 0.28
CHRNB1-205ENST00000573209 DCAF1Q9Y4B6 1507 aa16.79■□□□□ 0.28
CHRNB1-205ENST00000573209 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
CHRNB1-205ENST00000573209 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
CHRNB1-205ENST00000573209 CENPBP07199 599 aaPredicted RBP16.64■□□□□ 0.25
CHRNB1-205ENST00000573209 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
CHRNB1-205ENST00000573209 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
CHRNB1-205ENST00000573209 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
CHRNB1-205ENST00000573209 ACIN1Q9UKV3 1341 aaKnown RBP16.44■□□□□ 0.22
CHRNB1-205ENST00000573209 PCGF6Q9BYE7 350 aa16.34■□□□□ 0.21
CHRNB1-205ENST00000573209 DAXXQ9UER7 740 aaPredicted RBP16.28■□□□□ 0.2
CHRNB1-205ENST00000573209 GTF3C3Q9Y5Q9 886 aa16.26■□□□□ 0.19
CHRNB1-205ENST00000573209 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
CHRNB1-205ENST00000573209 ANP32EQ9BTT0 268 aa16.24■□□□□ 0.19
CHRNB1-205ENST00000573209 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
CHRNB1-205ENST00000573209 SCRIBQ14160 1630 aa16.09■□□□□ 0.17
CHRNB1-205ENST00000573209 EIF5BO60841 1220 aaKnown RBP16.04■□□□□ 0.16
CHRNB1-205ENST00000573209 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
CHRNB1-205ENST00000573209 NACADO15069 1562 aa16.02■□□□□ 0.16
CHRNB1-205ENST00000573209 RB1CC1Q8TDY2 1594 aa16.01■□□□□ 0.15
CHRNB1-205ENST00000573209 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
CHRNB1-205ENST00000573209 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
CHRNB1-205ENST00000573209 TRIM26Q12899 539 aaPredicted RBP15.88■□□□□ 0.13
CHRNB1-205ENST00000573209 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHRNB1-205ENST00000573209 UBE2Q2Q8WVN8 375 aa15.85■□□□□ 0.13
CHRNB1-205ENST00000573209 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
CHRNB1-205ENST00000573209 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
CHRNB1-205ENST00000573209 MROH2BQ7Z745 1585 aa15.71■□□□□ 0.11
CHRNB1-205ENST00000573209 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
CHRNB1-205ENST00000573209 WIZO95785 1651 aa15.69■□□□□ 0.1
CHRNB1-205ENST00000573209 CECR2Q9BXF3 1484 aa15.68■□□□□ 0.1
CHRNB1-205ENST00000573209 ANO8Q9HCE9 1232 aaPredicted RBP15.68■□□□□ 0.1
CHRNB1-205ENST00000573209 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
CHRNB1-205ENST00000573209 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
CHRNB1-205ENST00000573209 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
CHRNB1-205ENST00000573209 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
CHRNB1-205ENST00000573209 TOP2AP11388 1531 aaKnown RBP15.51■□□□□ 0.07
CHRNB1-205ENST00000573209 TSHZ2Q9NRE2 1034 aa15.5■□□□□ 0.07
CHRNB1-205ENST00000573209 ERICH6BQ5W0A0 696 aa15.48■□□□□ 0.07
CHRNB1-205ENST00000573209 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
CHRNB1-205ENST00000573209 MYT1LQ9UL68 1186 aa15.47■□□□□ 0.07
CHRNB1-205ENST00000573209 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
CHRNB1-205ENST00000573209 PKNOX2Q96KN3 472 aa15.46■□□□□ 0.06
CHRNB1-205ENST00000573209 PODXL2Q9NZ53 605 aa15.45■□□□□ 0.06
CHRNB1-205ENST00000573209 DIEXFQ68CQ4 756 aaKnown RBP15.44■□□□□ 0.06
CHRNB1-205ENST00000573209 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
CHRNB1-205ENST00000573209 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
CHRNB1-205ENST00000573209 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
CHRNB1-205ENST00000573209 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
CHRNB1-205ENST00000573209 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
CHRNB1-205ENST00000573209 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
CHRNB1-205ENST00000573209 EEA1Q15075 1411 aa15.29■□□□□ 0.04
CHRNB1-205ENST00000573209 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
CHRNB1-205ENST00000573209 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
CHRNB1-205ENST00000573209 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
CHRNB1-205ENST00000573209 CCDC136Q96JN2 1154 aa15.22■□□□□ 0.03
CHRNB1-205ENST00000573209 CEP162Q5TB80 1403 aa15.21■□□□□ 0.03
CHRNB1-205ENST00000573209 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.03
CHRNB1-205ENST00000573209 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
CHRNB1-205ENST00000573209 DEKP35659 375 aaKnown RBP15.14■□□□□ 0.01
CHRNB1-205ENST00000573209 GOLGA3Q08378 1498 aa15.14■□□□□ 0.01
CHRNB1-205ENST00000573209 SOGA1O94964 1423 aa15.14■□□□□ 0.01
CHRNB1-205ENST00000573209 KIF21BO75037 1637 aa15.12■□□□□ 0.01
CHRNB1-205ENST00000573209 CCER1Q8TC90 406 aaPredicted RBP15.12■□□□□ 0.01
CHRNB1-205ENST00000573209 CC2D2AQ9P2K1 1620 aa15.12■□□□□ 0.01
CHRNB1-205ENST00000573209 NEFLP07196 543 aa15.11■□□□□ 0.01
CHRNB1-205ENST00000573209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.08■□□□□ 0
CHRNB1-205ENST00000573209 PLPPR3Q6T4P5 718 aa15.05■□□□□ -0
CHRNB1-205ENST00000573209 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
CHRNB1-205ENST00000573209 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
CHRNB1-205ENST00000573209 SYNJ1O43426 1573 aa15.04■□□□□ -0
CHRNB1-205ENST00000573209 RTN4Q9NQC3 1192 aaKnown RBP15.03■□□□□ -0
CHRNB1-205ENST00000573209 RBM19Q9Y4C8 960 aaKnown RBP15.02□□□□□ -0.01
CHRNB1-205ENST00000573209 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
CHRNB1-205ENST00000573209 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.98□□□□□ -0.01
CHRNB1-205ENST00000573209 MSH5O43196 834 aa14.96□□□□□ -0.02
CHRNB1-205ENST00000573209 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.02
CHRNB1-205ENST00000573209 ARXQ96QS3 562 aa14.95□□□□□ -0.02
CHRNB1-205ENST00000573209 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
CHRNB1-205ENST00000573209 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
CHRNB1-205ENST00000573209 GLIPR1L2Q4G1C9 344 aa14.92□□□□□ -0.02
CHRNB1-205ENST00000573209 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
CHRNB1-205ENST00000573209 TOP2BQ02880 1626 aa14.92□□□□□ -0.02
CHRNB1-205ENST00000573209 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
CHRNB1-205ENST00000573209 CLIP1P30622 1438 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms