RNA–Protein interactions for RNA: ENST00000424381.5

UBE2E1-203, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 2 BASIC

Gene UBE2E1, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-203ENST00000424381 AEBP2Q6ZN18 517 aaPredicted RBP28.19■■■□□ 2.1
UBE2E1-203ENST00000424381 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
UBE2E1-203ENST00000424381 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
UBE2E1-203ENST00000424381 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
UBE2E1-203ENST00000424381 PLPPR3Q6T4P5 718 aa22.64■■□□□ 1.21
UBE2E1-203ENST00000424381 NISCHQ9Y2I1 1504 aa22.35■■□□□ 1.17
UBE2E1-203ENST00000424381 FOXD1Q16676 465 aa22.07■■□□□ 1.12
UBE2E1-203ENST00000424381 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
UBE2E1-203ENST00000424381 ADRA2BP18089 450 aa21.52■■□□□ 1.04
UBE2E1-203ENST00000424381 PIAS4Q8N2W9 510 aaPredicted RBP20.87■□□□□ 0.93
UBE2E1-203ENST00000424381 MSH5O43196 834 aa20.13■□□□□ 0.81
UBE2E1-203ENST00000424381 PPP4R3CPQ6ZMV5 832 aa20.03■□□□□ 0.8
UBE2E1-203ENST00000424381 KCNA4P22459 653 aa19.98■□□□□ 0.79
UBE2E1-203ENST00000424381 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
UBE2E1-203ENST00000424381 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
UBE2E1-203ENST00000424381 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
UBE2E1-203ENST00000424381 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
UBE2E1-203ENST00000424381 CNKSR2Q8WXI2 1034 aa19.36■□□□□ 0.69
UBE2E1-203ENST00000424381 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
UBE2E1-203ENST00000424381 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
UBE2E1-203ENST00000424381 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
UBE2E1-203ENST00000424381 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
UBE2E1-203ENST00000424381 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
UBE2E1-203ENST00000424381 ABCC9O60706 1549 aa18.89■□□□□ 0.61
UBE2E1-203ENST00000424381 HOXD11P31277 338 aaPredicted RBP18.77■□□□□ 0.6
UBE2E1-203ENST00000424381 ZCCHC6Q5VYS8 1495 aaKnown RBP18.73■□□□□ 0.59
UBE2E1-203ENST00000424381 DNAJC5BQ9UF47 199 aa18.65■□□□□ 0.58
UBE2E1-203ENST00000424381 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
UBE2E1-203ENST00000424381 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
UBE2E1-203ENST00000424381 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
UBE2E1-203ENST00000424381 ZBTB22O15209 634 aa18.45■□□□□ 0.54
UBE2E1-203ENST00000424381 NACADO15069 1562 aa18.44■□□□□ 0.54
UBE2E1-203ENST00000424381 RB1CC1Q8TDY2 1594 aa18.36■□□□□ 0.53
UBE2E1-203ENST00000424381 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
UBE2E1-203ENST00000424381 FOXD4L1Q9NU39 408 aa18.24■□□□□ 0.51
UBE2E1-203ENST00000424381 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
UBE2E1-203ENST00000424381 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
UBE2E1-203ENST00000424381 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
UBE2E1-203ENST00000424381 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
UBE2E1-203ENST00000424381 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
UBE2E1-203ENST00000424381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
UBE2E1-203ENST00000424381 POTEDQ86YR6 584 aa17.85■□□□□ 0.45
UBE2E1-203ENST00000424381 MYCNP04198 464 aaPredicted RBP17.8■□□□□ 0.44
UBE2E1-203ENST00000424381 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
UBE2E1-203ENST00000424381 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
UBE2E1-203ENST00000424381 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
UBE2E1-203ENST00000424381 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
UBE2E1-203ENST00000424381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
UBE2E1-203ENST00000424381 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
UBE2E1-203ENST00000424381 ATF5Q9Y2D1 282 aaPredicted RBP17.42■□□□□ 0.38
UBE2E1-203ENST00000424381 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
UBE2E1-203ENST00000424381 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
UBE2E1-203ENST00000424381 RNF39Q9H2S5 420 aa17.34■□□□□ 0.37
UBE2E1-203ENST00000424381 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
UBE2E1-203ENST00000424381 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
UBE2E1-203ENST00000424381 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
UBE2E1-203ENST00000424381 MROH2BQ7Z745 1585 aa17.25■□□□□ 0.35
UBE2E1-203ENST00000424381 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
UBE2E1-203ENST00000424381 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
UBE2E1-203ENST00000424381 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
UBE2E1-203ENST00000424381 APLP2Q06481 763 aa17.13■□□□□ 0.33
UBE2E1-203ENST00000424381 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
UBE2E1-203ENST00000424381 WIZO95785 1651 aa17.1■□□□□ 0.33
UBE2E1-203ENST00000424381 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
UBE2E1-203ENST00000424381 ATAD2BQ9ULI0 1458 aa17.07■□□□□ 0.32
UBE2E1-203ENST00000424381 SMARCA2P51531 1590 aa17.05■□□□□ 0.32
UBE2E1-203ENST00000424381 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
UBE2E1-203ENST00000424381 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
UBE2E1-203ENST00000424381 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
UBE2E1-203ENST00000424381 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
UBE2E1-203ENST00000424381 CAPN15O75808 1086 aa16.95■□□□□ 0.3
UBE2E1-203ENST00000424381 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
UBE2E1-203ENST00000424381 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
UBE2E1-203ENST00000424381 SUPT5HO00267 1087 aaKnown RBP16.81■□□□□ 0.28
UBE2E1-203ENST00000424381 POLA2Q14181 598 aa16.77■□□□□ 0.28
UBE2E1-203ENST00000424381 FKBP8Q14318 412 aa16.73■□□□□ 0.27
UBE2E1-203ENST00000424381 ABCB7O75027 752 aa16.72■□□□□ 0.27
UBE2E1-203ENST00000424381 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
UBE2E1-203ENST00000424381 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
UBE2E1-203ENST00000424381 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
UBE2E1-203ENST00000424381 DSG3P32926 999 aa16.62■□□□□ 0.25
UBE2E1-203ENST00000424381 PRDM2Q13029 1718 aa16.54■□□□□ 0.24
UBE2E1-203ENST00000424381 FBLN2P98095 1184 aa16.52■□□□□ 0.24
UBE2E1-203ENST00000424381 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
UBE2E1-203ENST00000424381 CFTRP13569 1480 aa16.5■□□□□ 0.23
UBE2E1-203ENST00000424381 NESP48681 1621 aa16.5■□□□□ 0.23
UBE2E1-203ENST00000424381 CADPSQ9ULU8 1353 aa16.48■□□□□ 0.23
UBE2E1-203ENST00000424381 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
UBE2E1-203ENST00000424381 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
UBE2E1-203ENST00000424381 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
UBE2E1-203ENST00000424381 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
UBE2E1-203ENST00000424381 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
UBE2E1-203ENST00000424381 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
UBE2E1-203ENST00000424381 THOC2Q8NI27 1593 aaKnown RBP16.25■□□□□ 0.19
UBE2E1-203ENST00000424381 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
UBE2E1-203ENST00000424381 ABCC8Q09428 1581 aa16.21■□□□□ 0.18
UBE2E1-203ENST00000424381 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
UBE2E1-203ENST00000424381 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
UBE2E1-203ENST00000424381 PROM2Q8N271 834 aa16.17■□□□□ 0.18
UBE2E1-203ENST00000424381 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms