RNA–Protein interactions for RNA: ENST00000597705.5

C19orf48-209, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 3

Gene C19orf48, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-209ENST00000597705 NISCHQ9Y2I1 1504 aa30.73■■■□□ 2.51
C19orf48-209ENST00000597705 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
C19orf48-209ENST00000597705 ABCC9O60706 1549 aa26.88■■□□□ 1.89
C19orf48-209ENST00000597705 RB1CC1Q8TDY2 1594 aa25.87■■□□□ 1.73
C19orf48-209ENST00000597705 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
C19orf48-209ENST00000597705 NACADO15069 1562 aa25.82■■□□□ 1.72
C19orf48-209ENST00000597705 MYO15BQ96JP2 1530 aa25.66■■□□□ 1.7
C19orf48-209ENST00000597705 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
C19orf48-209ENST00000597705 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
C19orf48-209ENST00000597705 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.62
C19orf48-209ENST00000597705 UNC13AQ9UPW8 1703 aa25.14■■□□□ 1.61
C19orf48-209ENST00000597705 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
C19orf48-209ENST00000597705 SCRIBQ14160 1630 aa24.89■■□□□ 1.57
C19orf48-209ENST00000597705 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
C19orf48-209ENST00000597705 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
C19orf48-209ENST00000597705 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
C19orf48-209ENST00000597705 CC2D2AQ9P2K1 1620 aa24.31■■□□□ 1.48
C19orf48-209ENST00000597705 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
C19orf48-209ENST00000597705 BAZ1AQ9NRL2 1556 aaPredicted RBP23.85■■□□□ 1.41
C19orf48-209ENST00000597705 NCAPD3P42695 1498 aa23.84■■□□□ 1.41
C19orf48-209ENST00000597705 SMARCA4P51532 1647 aa23.83■■□□□ 1.41
C19orf48-209ENST00000597705 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
C19orf48-209ENST00000597705 ATAD2BQ9ULI0 1458 aa23.78■■□□□ 1.4
C19orf48-209ENST00000597705 HMGXB3Q12766 1538 aa23.65■■□□□ 1.38
C19orf48-209ENST00000597705 PEG3Q9GZU2 1588 aa23.65■■□□□ 1.38
C19orf48-209ENST00000597705 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
C19orf48-209ENST00000597705 BAZ1BQ9UIG0 1483 aaKnown RBP23.59■■□□□ 1.37
C19orf48-209ENST00000597705 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
C19orf48-209ENST00000597705 WIZO95785 1651 aa23.35■■□□□ 1.33
C19orf48-209ENST00000597705 ERCC6Q03468 1493 aa23.25■■□□□ 1.31
C19orf48-209ENST00000597705 LAMC3Q9Y6N6 1575 aa23.21■■□□□ 1.31
C19orf48-209ENST00000597705 NESP48681 1621 aa23.19■■□□□ 1.3
C19orf48-209ENST00000597705 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
C19orf48-209ENST00000597705 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
C19orf48-209ENST00000597705 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
C19orf48-209ENST00000597705 CUX2O14529 1486 aa23.07■■□□□ 1.28
C19orf48-209ENST00000597705 CFTRP13569 1480 aa22.95■■□□□ 1.26
C19orf48-209ENST00000597705 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
C19orf48-209ENST00000597705 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.25
C19orf48-209ENST00000597705 THOC2Q8NI27 1593 aaKnown RBP22.85■■□□□ 1.25
C19orf48-209ENST00000597705 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
C19orf48-209ENST00000597705 CEP164Q9UPV0 1460 aa22.82■■□□□ 1.24
C19orf48-209ENST00000597705 MRC2Q9UBG0 1479 aa22.8■■□□□ 1.24
C19orf48-209ENST00000597705 SUPT5HO00267 1087 aaKnown RBP22.71■■□□□ 1.23
C19orf48-209ENST00000597705 WDR62O43379 1518 aa22.71■■□□□ 1.23
C19orf48-209ENST00000597705 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
C19orf48-209ENST00000597705 DNAJC5Q9H3Z4 198 aa22.58■■□□□ 1.21
C19orf48-209ENST00000597705 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
C19orf48-209ENST00000597705 URB2Q14146 1524 aaKnown RBP22.56■■□□□ 1.2
C19orf48-209ENST00000597705 TOPBP1Q92547 1522 aa22.43■■□□□ 1.18
C19orf48-209ENST00000597705 DNMBPQ6XZF7 1577 aa22.39■■□□□ 1.18
C19orf48-209ENST00000597705 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
C19orf48-209ENST00000597705 POLA1P09884 1462 aaPredicted RBP22.22■■□□□ 1.15
C19orf48-209ENST00000597705 SOGA1O94964 1423 aa22.21■■□□□ 1.15
C19orf48-209ENST00000597705 OSCARQ8IYS5 282 aa22.19■■□□□ 1.14
C19orf48-209ENST00000597705 ZNF608Q9ULD9 1512 aaPredicted RBP22.19■■□□□ 1.14
C19orf48-209ENST00000597705 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
C19orf48-209ENST00000597705 CUX1P39880 1505 aa22.17■■□□□ 1.14
C19orf48-209ENST00000597705 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
C19orf48-209ENST00000597705 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
C19orf48-209ENST00000597705 AQRO60306 1485 aaKnown RBP eCLIP22.09■■□□□ 1.13not detected■■■■□ 23.4
C19orf48-209ENST00000597705 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.13
C19orf48-209ENST00000597705 WDR97A6NE52 1622 aa22.08■■□□□ 1.13
C19orf48-209ENST00000597705 TDRD9Q8NDG6 1382 aaKnown RBP22.06■■□□□ 1.12
C19orf48-209ENST00000597705 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
C19orf48-209ENST00000597705 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
C19orf48-209ENST00000597705 BIVM-ERCC5R4GMW8 1640 aa21.96■■□□□ 1.11
C19orf48-209ENST00000597705 ABCA10Q8WWZ4 1543 aa21.96■■□□□ 1.11
C19orf48-209ENST00000597705 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
C19orf48-209ENST00000597705 FBLN2P98095 1184 aa21.94■■□□□ 1.1
C19orf48-209ENST00000597705 GAPVD1Q14C86 1478 aa21.92■■□□□ 1.1
C19orf48-209ENST00000597705 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
C19orf48-209ENST00000597705 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
C19orf48-209ENST00000597705 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
C19orf48-209ENST00000597705 SNAPC4Q5SXM2 1469 aa21.86■■□□□ 1.09
C19orf48-209ENST00000597705 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
C19orf48-209ENST00000597705 CHD1O14646 1710 aa21.82■■□□□ 1.08
C19orf48-209ENST00000597705 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
C19orf48-209ENST00000597705 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
C19orf48-209ENST00000597705 ERICH3Q5RHP9 1530 aa21.71■■□□□ 1.07
C19orf48-209ENST00000597705 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
C19orf48-209ENST00000597705 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
C19orf48-209ENST00000597705 ARHGEF11O15085 1522 aa21.66■■□□□ 1.06
C19orf48-209ENST00000597705 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
C19orf48-209ENST00000597705 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
C19orf48-209ENST00000597705 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
C19orf48-209ENST00000597705 KIF27Q86VH2 1401 aa21.65■■□□□ 1.06
C19orf48-209ENST00000597705 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
C19orf48-209ENST00000597705 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
C19orf48-209ENST00000597705 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
C19orf48-209ENST00000597705 CYB5RLQ6IPT4 315 aa21.58■■□□□ 1.05
C19orf48-209ENST00000597705 IGF1RP08069 1367 aa21.56■■□□□ 1.04
C19orf48-209ENST00000597705 NUP160Q12769 1436 aa21.54■■□□□ 1.04
C19orf48-209ENST00000597705 CUL7Q14999 1698 aa21.47■■□□□ 1.03
C19orf48-209ENST00000597705 CEP170Q5SW79 1584 aa21.46■■□□□ 1.03
C19orf48-209ENST00000597705 ARAP1Q96P48 1450 aa21.45■■□□□ 1.03
C19orf48-209ENST00000597705 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
C19orf48-209ENST00000597705 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
C19orf48-209ENST00000597705 SHROOM2Q13796 1616 aa21.36■■□□□ 1.01
C19orf48-209ENST00000597705 KIAA0586Q9BVV6 1533 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms