RNA–Protein interactions for RNA: ENST00000397278.7

APOL1-202, Transcript of apolipoprotein L1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOL1, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-202ENST00000397278 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
APOL1-202ENST00000397278 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
APOL1-202ENST00000397278 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
APOL1-202ENST00000397278 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
APOL1-202ENST00000397278 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
APOL1-202ENST00000397278 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
APOL1-202ENST00000397278 DCAF1Q9Y4B6 1507 aa17.75■□□□□ 0.43
APOL1-202ENST00000397278 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
APOL1-202ENST00000397278 ABCC9O60706 1549 aa17.47■□□□□ 0.39
APOL1-202ENST00000397278 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
APOL1-202ENST00000397278 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
APOL1-202ENST00000397278 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
APOL1-202ENST00000397278 NACADO15069 1562 aa17.16■□□□□ 0.34
APOL1-202ENST00000397278 CECR2Q9BXF3 1484 aa17.07■□□□□ 0.32
APOL1-202ENST00000397278 LOC105371045A0A1W2PR82 267 aa17.07■□□□□ 0.32
APOL1-202ENST00000397278 HRCP23327 699 aa17.05■□□□□ 0.32
APOL1-202ENST00000397278 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
APOL1-202ENST00000397278 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
APOL1-202ENST00000397278 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
APOL1-202ENST00000397278 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
APOL1-202ENST00000397278 WIZO95785 1651 aa16.88■□□□□ 0.29
APOL1-202ENST00000397278 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
APOL1-202ENST00000397278 FAM9AQ8IZU1 332 aaPredicted RBP16.85■□□□□ 0.29
APOL1-202ENST00000397278 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
APOL1-202ENST00000397278 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
APOL1-202ENST00000397278 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.275e-7■■■□□ 19.1
APOL1-202ENST00000397278 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
APOL1-202ENST00000397278 SMARCA4P51532 1647 aa16.61■□□□□ 0.25
APOL1-202ENST00000397278 TOP2AP11388 1531 aaKnown RBP16.53■□□□□ 0.24
APOL1-202ENST00000397278 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
APOL1-202ENST00000397278 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
APOL1-202ENST00000397278 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
APOL1-202ENST00000397278 ABCC8Q09428 1581 aa16.48■□□□□ 0.23
APOL1-202ENST00000397278 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
APOL1-202ENST00000397278 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
APOL1-202ENST00000397278 SOGA1O94964 1423 aa16.28■□□□□ 0.2
APOL1-202ENST00000397278 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
APOL1-202ENST00000397278 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
APOL1-202ENST00000397278 PEG3Q9GZU2 1588 aa16.23■□□□□ 0.19
APOL1-202ENST00000397278 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.18
APOL1-202ENST00000397278 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
APOL1-202ENST00000397278 WRNQ14191 1432 aaPredicted RBP eCLIP16.16■□□□□ 0.18
APOL1-202ENST00000397278 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
APOL1-202ENST00000397278 UBTFP17480 764 aaKnown RBP16.13■□□□□ 0.17
APOL1-202ENST00000397278 SYNJ1O43426 1573 aa16.1■□□□□ 0.17
APOL1-202ENST00000397278 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
APOL1-202ENST00000397278 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
APOL1-202ENST00000397278 TNIKQ9UKE5 1360 aa16.02■□□□□ 0.16
APOL1-202ENST00000397278 EEA1Q15075 1411 aa16.02■□□□□ 0.16
APOL1-202ENST00000397278 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
APOL1-202ENST00000397278 RANGAP1P46060 587 aaPredicted RBP15.98■□□□□ 0.15
APOL1-202ENST00000397278 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
APOL1-202ENST00000397278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
APOL1-202ENST00000397278 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
APOL1-202ENST00000397278 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
APOL1-202ENST00000397278 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
APOL1-202ENST00000397278 HMGXB3Q12766 1538 aa15.88■□□□□ 0.13
APOL1-202ENST00000397278 CCER1Q8TC90 406 aaPredicted RBP15.87■□□□□ 0.13
APOL1-202ENST00000397278 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
APOL1-202ENST00000397278 KIF21BO75037 1637 aa15.84■□□□□ 0.13
APOL1-202ENST00000397278 CLIP1P30622 1438 aa15.83■□□□□ 0.12
APOL1-202ENST00000397278 CUX1P39880 1505 aa15.79■□□□□ 0.12
APOL1-202ENST00000397278 BIVM-ERCC5R4GMW8 1640 aa15.78■□□□□ 0.12
APOL1-202ENST00000397278 CFTRP13569 1480 aa15.76■□□□□ 0.11
APOL1-202ENST00000397278 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
APOL1-202ENST00000397278 VPS8Q8N3P4 1428 aa15.71■□□□□ 0.1
APOL1-202ENST00000397278 NEUROD1Q13562 356 aa15.7■□□□□ 0.1
APOL1-202ENST00000397278 PELP1Q8IZL8 1130 aaKnown RBP15.69■□□□□ 0.1
APOL1-202ENST00000397278 APLP2Q06481 763 aa15.68■□□□□ 0.1
APOL1-202ENST00000397278 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
APOL1-202ENST00000397278 PRXQ9BXM0 1461 aa15.67■□□□□ 0.1
APOL1-202ENST00000397278 KIF27Q86VH2 1401 aa15.66■□□□□ 0.1
APOL1-202ENST00000397278 ACIN1Q9UKV3 1341 aaKnown RBP15.65■□□□□ 0.1
APOL1-202ENST00000397278 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
APOL1-202ENST00000397278 DIEXFQ68CQ4 756 aaKnown RBP15.61■□□□□ 0.09
APOL1-202ENST00000397278 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
APOL1-202ENST00000397278 CUX2O14529 1486 aa15.6■□□□□ 0.09
APOL1-202ENST00000397278 ARAP1Q96P48 1450 aa15.58■□□□□ 0.09
APOL1-202ENST00000397278 PRDM2Q13029 1718 aa15.56■□□□□ 0.08
APOL1-202ENST00000397278 GTF3C3Q9Y5Q9 886 aa15.56■□□□□ 0.08
APOL1-202ENST00000397278 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
APOL1-202ENST00000397278 KANK4Q5T7N3 995 aaPredicted RBP15.55■□□□□ 0.08
APOL1-202ENST00000397278 NESP48681 1621 aa15.52■□□□□ 0.08
APOL1-202ENST00000397278 IGF1RP08069 1367 aa15.52■□□□□ 0.07
APOL1-202ENST00000397278 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
APOL1-202ENST00000397278 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
APOL1-202ENST00000397278 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
APOL1-202ENST00000397278 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
APOL1-202ENST00000397278 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.06
APOL1-202ENST00000397278 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
APOL1-202ENST00000397278 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
APOL1-202ENST00000397278 YTHDC1Q96MU7 727 aaKnown RBP15.43■□□□□ 0.06
APOL1-202ENST00000397278 ITGAEP38570 1179 aa15.4■□□□□ 0.06
APOL1-202ENST00000397278 POLA1P09884 1462 aaPredicted RBP15.38■□□□□ 0.05
APOL1-202ENST00000397278 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
APOL1-202ENST00000397278 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
APOL1-202ENST00000397278 ATP1B4Q9UN42 357 aaPredicted RBP15.37■□□□□ 0.05
APOL1-202ENST00000397278 DNMBPQ6XZF7 1577 aa15.36■□□□□ 0.05
APOL1-202ENST00000397278 MIER1Q8N108 512 aa15.31■□□□□ 0.04
APOL1-202ENST00000397278 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms