RNA–Protein interactions for RNA: ENST00000641834.1

C19orf48-216, Transcript of chromosome 19 open reading frame 48, humanhuman

Gene C19orf48, Length 1,718 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-216ENST00000641834 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
C19orf48-216ENST00000641834 CCDC180Q9P1Z9 1646 aa32.02■■■□□ 2.72
C19orf48-216ENST00000641834 ZCCHC6Q5VYS8 1495 aaKnown RBP31.59■■■□□ 2.65
C19orf48-216ENST00000641834 SHROOM4Q9ULL8 1493 aa31.13■■■□□ 2.57
C19orf48-216ENST00000641834 DCAF1Q9Y4B6 1507 aa30.85■■■□□ 2.53
C19orf48-216ENST00000641834 SUPT5HO00267 1087 aaKnown RBP30.44■■■□□ 2.46
C19orf48-216ENST00000641834 DCAF8L2P0C7V8 631 aa30.19■■■□□ 2.42
C19orf48-216ENST00000641834 MYO15BQ96JP2 1530 aa30.05■■■□□ 2.4
C19orf48-216ENST00000641834 CHIC1Q5VXU3 224 aa29.84■■■□□ 2.37
C19orf48-216ENST00000641834 ABCC9O60706 1549 aa29.81■■■□□ 2.36
C19orf48-216ENST00000641834 SCRIBQ14160 1630 aa29.58■■■□□ 2.33
C19orf48-216ENST00000641834 NACADO15069 1562 aa29.49■■■□□ 2.31
C19orf48-216ENST00000641834 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
C19orf48-216ENST00000641834 RB1CC1Q8TDY2 1594 aa29.15■■■□□ 2.26
C19orf48-216ENST00000641834 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
C19orf48-216ENST00000641834 MROH2BQ7Z745 1585 aa28.89■■■□□ 2.22
C19orf48-216ENST00000641834 WIZO95785 1651 aa28.73■■■□□ 2.19
C19orf48-216ENST00000641834 HRCP23327 699 aa28.73■■■□□ 2.19
C19orf48-216ENST00000641834 LOC105371045A0A1W2PR82 267 aa28.72■■■□□ 2.19
C19orf48-216ENST00000641834 BAZ1AQ9NRL2 1556 aaPredicted RBP28.72■■■□□ 2.19
C19orf48-216ENST00000641834 UNC13AQ9UPW8 1703 aa28.61■■■□□ 2.17
C19orf48-216ENST00000641834 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
C19orf48-216ENST00000641834 PCGF6Q9BYE7 350 aa28.55■■■□□ 2.16
C19orf48-216ENST00000641834 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
C19orf48-216ENST00000641834 SMARCA4P51532 1647 aa28.46■■■□□ 2.15
C19orf48-216ENST00000641834 TOP2AP11388 1531 aaKnown RBP28.42■■■□□ 2.14
C19orf48-216ENST00000641834 TRIM26Q12899 539 aaPredicted RBP28.27■■■□□ 2.12
C19orf48-216ENST00000641834 SMARCA2P51531 1590 aa28.23■■■□□ 2.11
C19orf48-216ENST00000641834 BICRAQ9NZM4 1560 aa28.21■■■□□ 2.11
C19orf48-216ENST00000641834 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
C19orf48-216ENST00000641834 PEG3Q9GZU2 1588 aa28.09■■■□□ 2.09
C19orf48-216ENST00000641834 FAM9AQ8IZU1 332 aaPredicted RBP28.04■■■□□ 2.08
C19orf48-216ENST00000641834 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
C19orf48-216ENST00000641834 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
C19orf48-216ENST00000641834 EEA1Q15075 1411 aa27.74■■■□□ 2.03
C19orf48-216ENST00000641834 PABPN1Q86U42 306 aaKnown RBP eCLIP27.7■■■□□ 2.03not detected■□□□□ 8.1
C19orf48-216ENST00000641834 ZEB1P37275 1124 aaPredicted RBP27.69■■■□□ 2.02
C19orf48-216ENST00000641834 ATAD2BQ9ULI0 1458 aa27.66■■■□□ 2.02
C19orf48-216ENST00000641834 WRNQ14191 1432 aaPredicted RBP eCLIP27.65■■■□□ 2.02
C19orf48-216ENST00000641834 SOGA1O94964 1423 aa27.62■■■□□ 2.01
C19orf48-216ENST00000641834 EHMT2Q96KQ7 1210 aa27.58■■■□□ 2.01
C19orf48-216ENST00000641834 TNIKQ9UKE5 1360 aa27.56■■■□□ 2
C19orf48-216ENST00000641834 BAZ1BQ9UIG0 1483 aaKnown RBP27.52■■■□□ 2
C19orf48-216ENST00000641834 CEP162Q5TB80 1403 aa27.5■■□□□ 1.99
C19orf48-216ENST00000641834 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
C19orf48-216ENST00000641834 RUSC2Q8N2Y8 1516 aa27.49■■□□□ 1.99
C19orf48-216ENST00000641834 CSRNP3Q8WYN3 585 aa27.43■■□□□ 1.98
C19orf48-216ENST00000641834 GOLGA3Q08378 1498 aa27.42■■□□□ 1.98
C19orf48-216ENST00000641834 KIF21BO75037 1637 aa27.42■■□□□ 1.98
C19orf48-216ENST00000641834 HMGXB3Q12766 1538 aa27.31■■□□□ 1.96
C19orf48-216ENST00000641834 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
C19orf48-216ENST00000641834 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
C19orf48-216ENST00000641834 BIVM-ERCC5R4GMW8 1640 aa27.26■■□□□ 1.95
C19orf48-216ENST00000641834 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
C19orf48-216ENST00000641834 UBTFP17480 764 aaKnown RBP27.1■■□□□ 1.93
C19orf48-216ENST00000641834 RAPGEF2Q9Y4G8 1499 aa27.01■■□□□ 1.91
C19orf48-216ENST00000641834 CLIP1P30622 1438 aa27■■□□□ 1.91
C19orf48-216ENST00000641834 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
C19orf48-216ENST00000641834 PRDM2Q13029 1718 aa26.98■■□□□ 1.91
C19orf48-216ENST00000641834 VPS8Q8N3P4 1428 aa26.97■■□□□ 1.91
C19orf48-216ENST00000641834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.95■■□□□ 1.9
C19orf48-216ENST00000641834 CFTRP13569 1480 aa26.94■■□□□ 1.9
C19orf48-216ENST00000641834 CUX1P39880 1505 aa26.94■■□□□ 1.9
C19orf48-216ENST00000641834 PRXQ9BXM0 1461 aa26.92■■□□□ 1.9
C19orf48-216ENST00000641834 CCER1Q8TC90 406 aaPredicted RBP26.9■■□□□ 1.9
C19orf48-216ENST00000641834 TTBK1Q5TCY1 1321 aaPredicted RBP26.73■■□□□ 1.87
C19orf48-216ENST00000641834 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
C19orf48-216ENST00000641834 ARAP1Q96P48 1450 aa26.69■■□□□ 1.86
C19orf48-216ENST00000641834 CADPSQ9ULU8 1353 aa26.56■■□□□ 1.84
C19orf48-216ENST00000641834 APLP2Q06481 763 aa26.5■■□□□ 1.83
C19orf48-216ENST00000641834 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
C19orf48-216ENST00000641834 ARHGAP35Q9NRY4 1499 aa26.46■■□□□ 1.83
C19orf48-216ENST00000641834 CUX2O14529 1486 aa26.42■■□□□ 1.82
C19orf48-216ENST00000641834 IGF1RP08069 1367 aa26.41■■□□□ 1.82
C19orf48-216ENST00000641834 FGD5Q6ZNL6 1462 aa26.41■■□□□ 1.82
C19orf48-216ENST00000641834 HNRNPUL2Q1KMD3 747 aaKnown RBP26.39■■□□□ 1.81
C19orf48-216ENST00000641834 RRBP1Q9P2E9 1410 aaKnown RBP26.39■■□□□ 1.81
C19orf48-216ENST00000641834 DIEXFQ68CQ4 756 aaKnown RBP26.38■■□□□ 1.81
C19orf48-216ENST00000641834 MAP3K1Q13233 1512 aa26.35■■□□□ 1.81
C19orf48-216ENST00000641834 DNMBPQ6XZF7 1577 aa26.31■■□□□ 1.8
C19orf48-216ENST00000641834 ZNF316A6NFI3 1004 aaPredicted RBP26.31■■□□□ 1.8
C19orf48-216ENST00000641834 RANGAP1P46060 587 aaPredicted RBP26.31■■□□□ 1.8
C19orf48-216ENST00000641834 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
C19orf48-216ENST00000641834 SCAF1Q9H7N4 1312 aaKnown RBP26.28■■□□□ 1.8
C19orf48-216ENST00000641834 CLSPNQ9HAW4 1339 aa26.28■■□□□ 1.8
C19orf48-216ENST00000641834 KANK4Q5T7N3 995 aaPredicted RBP26.28■■□□□ 1.8
C19orf48-216ENST00000641834 CARMIL1Q5VZK9 1371 aa26.26■■□□□ 1.79
C19orf48-216ENST00000641834 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
C19orf48-216ENST00000641834 TIAM1Q13009 1591 aa26.23■■□□□ 1.79
C19orf48-216ENST00000641834 DHX57Q6P158 1386 aaKnown RBP26.19■■□□□ 1.78
C19orf48-216ENST00000641834 TOPBP1Q92547 1522 aa26.18■■□□□ 1.78
C19orf48-216ENST00000641834 CFAP43Q8NDM7 1665 aa26.17■■□□□ 1.78
C19orf48-216ENST00000641834 ACIN1Q9UKV3 1341 aaKnown RBP26.15■■□□□ 1.78
C19orf48-216ENST00000641834 CUL7Q14999 1698 aa26.15■■□□□ 1.78
C19orf48-216ENST00000641834 WDR97A6NE52 1622 aa26.14■■□□□ 1.78
C19orf48-216ENST00000641834 CCNB3Q8WWL7 1395 aa26.13■■□□□ 1.77
C19orf48-216ENST00000641834 POLA1P09884 1462 aaPredicted RBP26.13■■□□□ 1.77
C19orf48-216ENST00000641834 LAMC3Q9Y6N6 1575 aa26.11■■□□□ 1.77
C19orf48-216ENST00000641834 EFCAB5A4FU69 1503 aa26.07■■□□□ 1.76
C19orf48-216ENST00000641834 CTTNBP2Q8WZ74 1663 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms