RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.91
CHRNB1-202ENST00000536404 ABCC9O60706 1549 aa24.08■■□□□ 1.45
CHRNB1-202ENST00000536404 CCDC180Q9P1Z9 1646 aa24.08■■□□□ 1.44
CHRNB1-202ENST00000536404 RB1CC1Q8TDY2 1594 aa22.9■■□□□ 1.26
CHRNB1-202ENST00000536404 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
CHRNB1-202ENST00000536404 NACADO15069 1562 aa22.77■■□□□ 1.24
CHRNB1-202ENST00000536404 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
CHRNB1-202ENST00000536404 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
CHRNB1-202ENST00000536404 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
CHRNB1-202ENST00000536404 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
CHRNB1-202ENST00000536404 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
CHRNB1-202ENST00000536404 BICRAQ9NZM4 1560 aa22.27■■□□□ 1.16
CHRNB1-202ENST00000536404 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
CHRNB1-202ENST00000536404 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
CHRNB1-202ENST00000536404 SHROOM4Q9ULL8 1493 aa21.89■■□□□ 1.1
CHRNB1-202ENST00000536404 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
CHRNB1-202ENST00000536404 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
CHRNB1-202ENST00000536404 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
CHRNB1-202ENST00000536404 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
CHRNB1-202ENST00000536404 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
CHRNB1-202ENST00000536404 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
CHRNB1-202ENST00000536404 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
CHRNB1-202ENST00000536404 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.93
CHRNB1-202ENST00000536404 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
CHRNB1-202ENST00000536404 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
CHRNB1-202ENST00000536404 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
CHRNB1-202ENST00000536404 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
CHRNB1-202ENST00000536404 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
CHRNB1-202ENST00000536404 NESP48681 1621 aa20.73■□□□□ 0.91
CHRNB1-202ENST00000536404 CUX2O14529 1486 aa20.65■□□□□ 0.9
CHRNB1-202ENST00000536404 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
CHRNB1-202ENST00000536404 WIZO95785 1651 aa20.55■□□□□ 0.88
CHRNB1-202ENST00000536404 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
CHRNB1-202ENST00000536404 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
CHRNB1-202ENST00000536404 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
CHRNB1-202ENST00000536404 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
CHRNB1-202ENST00000536404 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
CHRNB1-202ENST00000536404 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
CHRNB1-202ENST00000536404 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
CHRNB1-202ENST00000536404 MRC2Q9UBG0 1479 aa20.25■□□□□ 0.83
CHRNB1-202ENST00000536404 CFTRP13569 1480 aa20.2■□□□□ 0.82
CHRNB1-202ENST00000536404 FANCD2Q9BXW9 1451 aa20.19■□□□□ 0.82
CHRNB1-202ENST00000536404 WDR62O43379 1518 aa20.18■□□□□ 0.82
CHRNB1-202ENST00000536404 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
CHRNB1-202ENST00000536404 CCDC88BA6NC98 1476 aa20.08■□□□□ 0.81
CHRNB1-202ENST00000536404 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
CHRNB1-202ENST00000536404 PRDM2Q13029 1718 aa19.95■□□□□ 0.78
CHRNB1-202ENST00000536404 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
CHRNB1-202ENST00000536404 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
CHRNB1-202ENST00000536404 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
CHRNB1-202ENST00000536404 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
CHRNB1-202ENST00000536404 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
CHRNB1-202ENST00000536404 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
CHRNB1-202ENST00000536404 DNMBPQ6XZF7 1577 aa19.73■□□□□ 0.75
CHRNB1-202ENST00000536404 SUPT5HO00267 1087 aaKnown RBP19.65■□□□□ 0.74
CHRNB1-202ENST00000536404 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
CHRNB1-202ENST00000536404 TARBP1Q13395 1621 aaKnown RBP19.63■□□□□ 0.73
CHRNB1-202ENST00000536404 POLA1P09884 1462 aaPredicted RBP19.62■□□□□ 0.73
CHRNB1-202ENST00000536404 EIF4G3O43432 1585 aaKnown RBP19.62■□□□□ 0.73
CHRNB1-202ENST00000536404 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
CHRNB1-202ENST00000536404 SOGA1O94964 1423 aa19.56■□□□□ 0.72
CHRNB1-202ENST00000536404 CUX1P39880 1505 aa19.53■□□□□ 0.72
CHRNB1-202ENST00000536404 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
CHRNB1-202ENST00000536404 FGD5Q6ZNL6 1462 aa19.52■□□□□ 0.72
CHRNB1-202ENST00000536404 FBLN2P98095 1184 aa19.5■□□□□ 0.71
CHRNB1-202ENST00000536404 RIMBP3CA6NJZ7 1639 aa19.49■□□□□ 0.71
CHRNB1-202ENST00000536404 RIMBP3BA6NNM3 1639 aa19.49■□□□□ 0.71
CHRNB1-202ENST00000536404 RIMBP3Q9UFD9 1639 aa19.49■□□□□ 0.71
CHRNB1-202ENST00000536404 CHD1O14646 1710 aa19.47■□□□□ 0.71
CHRNB1-202ENST00000536404 ARHGEF11O15085 1522 aa19.43■□□□□ 0.7
CHRNB1-202ENST00000536404 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
CHRNB1-202ENST00000536404 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
CHRNB1-202ENST00000536404 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
CHRNB1-202ENST00000536404 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
CHRNB1-202ENST00000536404 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
CHRNB1-202ENST00000536404 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
CHRNB1-202ENST00000536404 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
CHRNB1-202ENST00000536404 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
CHRNB1-202ENST00000536404 ABCA10Q8WWZ4 1543 aa19.29■□□□□ 0.68
CHRNB1-202ENST00000536404 ARAP1Q96P48 1450 aa19.27■□□□□ 0.68
CHRNB1-202ENST00000536404 SYNJ2O15056 1496 aa19.26■□□□□ 0.67
CHRNB1-202ENST00000536404 PBRM1Q86U86 1689 aa19.26■□□□□ 0.67
CHRNB1-202ENST00000536404 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
CHRNB1-202ENST00000536404 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
CHRNB1-202ENST00000536404 ABCA5Q8WWZ7 1642 aa19.24■□□□□ 0.67
CHRNB1-202ENST00000536404 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
CHRNB1-202ENST00000536404 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
CHRNB1-202ENST00000536404 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
CHRNB1-202ENST00000536404 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
CHRNB1-202ENST00000536404 TRHP20396 242 aaPredicted RBP19.09■□□□□ 0.65
CHRNB1-202ENST00000536404 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
CHRNB1-202ENST00000536404 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
CHRNB1-202ENST00000536404 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
CHRNB1-202ENST00000536404 NUP160Q12769 1436 aa19.03■□□□□ 0.64
CHRNB1-202ENST00000536404 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
CHRNB1-202ENST00000536404 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
CHRNB1-202ENST00000536404 MYT1Q01538 1121 aa18.96■□□□□ 0.63
CHRNB1-202ENST00000536404 SHROOM2Q13796 1616 aa18.91■□□□□ 0.62
CHRNB1-202ENST00000536404 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
CHRNB1-202ENST00000536404 IGF1RP08069 1367 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms