RNA–Protein interactions for RNA: ENST00000472706.5

USP34-211, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-211ENST00000472706 CHIC1Q5VXU3 224 aa12.83□□□□□ -0.36
USP34-211ENST00000472706 AEBP2Q6ZN18 517 aaPredicted RBP12.73□□□□□ -0.37
USP34-211ENST00000472706 PHF23Q9BUL5 403 aaPredicted RBP11.28□□□□□ -0.6
USP34-211ENST00000472706 SENP3Q9H4L4 574 aaPredicted RBP10.85□□□□□ -0.67
USP34-211ENST00000472706 PLPPR3Q6T4P5 718 aa10.63□□□□□ -0.71
USP34-211ENST00000472706 FOXD1Q16676 465 aa9.96□□□□□ -0.82
USP34-211ENST00000472706 ADRA2BP18089 450 aa9.87□□□□□ -0.83
USP34-211ENST00000472706 PPP6R1Q9UPN7 881 aa9.84□□□□□ -0.83
USP34-211ENST00000472706 KCNA4P22459 653 aa9.52□□□□□ -0.89
USP34-211ENST00000472706 PIAS4Q8N2W9 510 aaPredicted RBP9.52□□□□□ -0.89
USP34-211ENST00000472706 PPP4R3CPQ6ZMV5 832 aa9.38□□□□□ -0.91
USP34-211ENST00000472706 NCBP3Q53F19 620 aaKnown RBP9.31□□□□□ -0.92
USP34-211ENST00000472706 EHMT2Q96KQ7 1210 aa9.3□□□□□ -0.92
USP34-211ENST00000472706 SLC4A1APQ9BWU0 796 aaKnown RBP9.18□□□□□ -0.94
USP34-211ENST00000472706 SCAF1Q9H7N4 1312 aaKnown RBP9.14□□□□□ -0.95
USP34-211ENST00000472706 MSH5O43196 834 aa9.12□□□□□ -0.95
USP34-211ENST00000472706 NPM3O75607 178 aaKnown RBP9.08□□□□□ -0.96
USP34-211ENST00000472706 CNKSR2Q8WXI2 1034 aa9.06□□□□□ -0.96
USP34-211ENST00000472706 CSRNP3Q8WYN3 585 aa9.01□□□□□ -0.97
USP34-211ENST00000472706 MAPK8IP2Q13387 824 aaPredicted RBP8.84□□□□□ -0.99
USP34-211ENST00000472706 PELP1Q8IZL8 1130 aaKnown RBP8.82□□□□□ -1
USP34-211ENST00000472706 RNF216Q9NWF9 866 aaPredicted RBP8.79□□□□□ -1
USP34-211ENST00000472706 DNAJC5BQ9UF47 199 aa8.79□□□□□ -1
USP34-211ENST00000472706 NISCHQ9Y2I1 1504 aa8.74□□□□□ -1.01
USP34-211ENST00000472706 ZBTB22O15209 634 aa8.73□□□□□ -1.01
USP34-211ENST00000472706 FOXD4L1Q9NU39 408 aa8.71□□□□□ -1.02
USP34-211ENST00000472706 DMRT2Q9Y5R5 561 aa8.68□□□□□ -1.02
USP34-211ENST00000472706 MYT1Q01538 1121 aa8.67□□□□□ -1.02
USP34-211ENST00000472706 HOXD11P31277 338 aaPredicted RBP8.64□□□□□ -1.03
USP34-211ENST00000472706 SLC4A2P04920 1241 aa8.46□□□□□ -1.06
USP34-211ENST00000472706 HRCP23327 699 aa8.46□□□□□ -1.06
USP34-211ENST00000472706 MYCNP04198 464 aaPredicted RBP8.42□□□□□ -1.06
USP34-211ENST00000472706 ATXN8OSP0DMR3 200 aa8.41□□□□□ -1.06
USP34-211ENST00000472706 DCAF8L1A6NGE4 600 aa8.32□□□□□ -1.08
USP34-211ENST00000472706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.29□□□□□ -1.081e-6■■□□□ 13.2
USP34-211ENST00000472706 TTBK1Q5TCY1 1321 aaPredicted RBP8.27□□□□□ -1.09
USP34-211ENST00000472706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.25□□□□□ -1.09
USP34-211ENST00000472706 HNRNPUL2Q1KMD3 747 aaKnown RBP8.25□□□□□ -1.09
USP34-211ENST00000472706 DNAJC5Q9H3Z4 198 aa8.23□□□□□ -1.09
USP34-211ENST00000472706 SAMD1Q6SPF0 538 aaPredicted RBP8.21□□□□□ -1.1
USP34-211ENST00000472706 FKBP8Q14318 412 aa8.15□□□□□ -1.1
USP34-211ENST00000472706 U3KPZ7 1027 aaPredicted RBP8.11□□□□□ -1.11
USP34-211ENST00000472706 APLP2Q06481 763 aa8.09□□□□□ -1.11
USP34-211ENST00000472706 AMER1Q5JTC6 1135 aaPredicted RBP8.09□□□□□ -1.11
USP34-211ENST00000472706 ZEB1P37275 1124 aaPredicted RBP8.08□□□□□ -1.12
USP34-211ENST00000472706 ATF5Q9Y2D1 282 aaPredicted RBP8.08□□□□□ -1.12
USP34-211ENST00000472706 DCAF1Q9Y4B6 1507 aa8.04□□□□□ -1.12
USP34-211ENST00000472706 RTN4Q9NQC3 1192 aaKnown RBP8.01□□□□□ -1.13
USP34-211ENST00000472706 PCGF6Q9BYE7 350 aa8□□□□□ -1.13
USP34-211ENST00000472706 ZNF219Q9P2Y4 722 aaPredicted RBP8□□□□□ -1.13
USP34-211ENST00000472706 PPARGC1BQ86YN6 1023 aaKnown RBP7.97□□□□□ -1.13
USP34-211ENST00000472706 CCDC180Q9P1Z9 1646 aa7.96□□□□□ -1.14
USP34-211ENST00000472706 TRIM26Q12899 539 aaPredicted RBP7.88□□□□□ -1.15
USP34-211ENST00000472706 ACIN1Q9UKV3 1341 aaKnown RBP7.87□□□□□ -1.15
USP34-211ENST00000472706 CENPBP07199 599 aaPredicted RBP7.86□□□□□ -1.15
USP34-211ENST00000472706 MYO15BQ96JP2 1530 aa7.86□□□□□ -1.15
USP34-211ENST00000472706 SLC24A1O60721 1099 aa7.85□□□□□ -1.15
USP34-211ENST00000472706 FBXO3Q9UK99 471 aa7.85□□□□□ -1.15
USP34-211ENST00000472706 FBLN2P98095 1184 aa7.84□□□□□ -1.15
USP34-211ENST00000472706 SPDYE4A6NLX3 237 aa7.83□□□□□ -1.16
USP34-211ENST00000472706 TRHP20396 242 aaPredicted RBP7.83□□□□□ -1.16
USP34-211ENST00000472706 RNF39Q9H2S5 420 aa7.81□□□□□ -1.16
USP34-211ENST00000472706 CAPN15O75808 1086 aa7.79□□□□□ -1.16
USP34-211ENST00000472706 C1QBPQ07021 282 aaKnown RBP7.79□□□□□ -1.16
USP34-211ENST00000472706 POLA2Q14181 598 aa7.79□□□□□ -1.16
USP34-211ENST00000472706 SPINK5Q9NQ38 1064 aaPredicted RBP7.78□□□□□ -1.16
USP34-211ENST00000472706 MKRN4PQ13434 485 aaPredicted RBP7.76□□□□□ -1.17
USP34-211ENST00000472706 ZBTB12Q9Y330 459 aaPredicted RBP7.74□□□□□ -1.17
USP34-211ENST00000472706 SUPT5HO00267 1087 aaKnown RBP7.71□□□□□ -1.18
USP34-211ENST00000472706 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
USP34-211ENST00000472706 NEUROD1Q13562 356 aa7.7□□□□□ -1.18
USP34-211ENST00000472706 PROM2Q8N271 834 aa7.7□□□□□ -1.18
USP34-211ENST00000472706 CLSPNQ9HAW4 1339 aa7.7□□□□□ -1.18
USP34-211ENST00000472706 ERICH6Q7L0X2 663 aa7.69□□□□□ -1.18
USP34-211ENST00000472706 VASPP50552 380 aaPredicted RBP7.66□□□□□ -1.18
USP34-211ENST00000472706 BCL11AQ9H165 835 aa7.66□□□□□ -1.18
USP34-211ENST00000472706 ABCB7O75027 752 aa7.63□□□□□ -1.19
USP34-211ENST00000472706 POTEDQ86YR6 584 aa7.62□□□□□ -1.19
USP34-211ENST00000472706 SHROOM4Q9ULL8 1493 aa7.6□□□□□ -1.19
USP34-211ENST00000472706 ANP32EQ9BTT0 268 aa7.59□□□□□ -1.19
USP34-211ENST00000472706 DIEXFQ68CQ4 756 aaKnown RBP7.56□□□□□ -1.2
USP34-211ENST00000472706 IFNLR1Q8IU57 520 aaPredicted RBP7.56□□□□□ -1.2
USP34-211ENST00000472706 ZNF692Q9BU19 519 aaPredicted RBP7.55□□□□□ -1.2
USP34-211ENST00000472706 DSG3P32926 999 aa7.54□□□□□ -1.2
USP34-211ENST00000472706 SPDYE2BA6NHP3 402 aa7.53□□□□□ -1.2
USP34-211ENST00000472706 SPDYE6P0CI01 402 aa7.53□□□□□ -1.2
USP34-211ENST00000472706 PRKCSHP14314 528 aaPredicted RBP7.53□□□□□ -1.2
USP34-211ENST00000472706 SPDYE2Q495Y8 402 aa7.53□□□□□ -1.2
USP34-211ENST00000472706 STAG3Q9UJ98 1225 aa7.53□□□□□ -1.2
USP34-211ENST00000472706 ZCCHC6Q5VYS8 1495 aaKnown RBP7.52□□□□□ -1.21
USP34-211ENST00000472706 FAM9AQ8IZU1 332 aaPredicted RBP7.51□□□□□ -1.21
USP34-211ENST00000472706 KLHL34Q8N239 644 aa7.5□□□□□ -1.21
USP34-211ENST00000472706 DCAF8L2P0C7V8 631 aa7.48□□□□□ -1.21
USP34-211ENST00000472706 OSCARQ8IYS5 282 aa7.47□□□□□ -1.21
USP34-211ENST00000472706 TRIM41Q8WV44 630 aa7.46□□□□□ -1.22
USP34-211ENST00000472706 SPOCK2Q92563 424 aa7.46□□□□□ -1.22
USP34-211ENST00000472706 MYT1LQ9UL68 1186 aa7.46□□□□□ -1.22
USP34-211ENST00000472706 SSUH2Q9Y2M2 353 aa7.46□□□□□ -1.22
USP34-211ENST00000472706 LOC105371045A0A1W2PR82 267 aa7.45□□□□□ -1.22
USP34-211ENST00000472706 PLCB2Q00722 1185 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms