RNA–Protein interactions for RNA: ENST00000463046.5

USP34-207, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 6,307 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-207ENST00000463046 NISCHQ9Y2I1 1504 aa12.21□□□□□ -0.46
USP34-207ENST00000463046 DCAF8L2P0C7V8 631 aa10.77□□□□□ -0.69
USP34-207ENST00000463046 CCDC180Q9P1Z9 1646 aa10.58□□□□□ -0.72
USP34-207ENST00000463046 DCAF1Q9Y4B6 1507 aa10.29□□□□□ -0.76
USP34-207ENST00000463046 MYO15BQ96JP2 1530 aa10.28□□□□□ -0.76
USP34-207ENST00000463046 NACADO15069 1562 aa10.18□□□□□ -0.78
USP34-207ENST00000463046 ZCCHC6Q5VYS8 1495 aaKnown RBP10.18□□□□□ -0.78
USP34-207ENST00000463046 ABCC9O60706 1549 aa10.15□□□□□ -0.79
USP34-207ENST00000463046 FAM9AQ8IZU1 332 aaPredicted RBP10.12□□□□□ -0.79
USP34-207ENST00000463046 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
USP34-207ENST00000463046 SHROOM4Q9ULL8 1493 aa10□□□□□ -0.81
USP34-207ENST00000463046 SUPT5HO00267 1087 aaKnown RBP9.99□□□□□ -0.81
USP34-207ENST00000463046 SCRIBQ14160 1630 aa9.72□□□□□ -0.85
USP34-207ENST00000463046 APLP2Q06481 763 aa9.7□□□□□ -0.86
USP34-207ENST00000463046 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
USP34-207ENST00000463046 TRIM41Q8WV44 630 aa9.67□□□□□ -0.86
USP34-207ENST00000463046 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
USP34-207ENST00000463046 SMARCA2P51531 1590 aa9.57□□□□□ -0.88
USP34-207ENST00000463046 EEA1Q15075 1411 aa9.54□□□□□ -0.88
USP34-207ENST00000463046 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
USP34-207ENST00000463046 RSF1Q96T23 1441 aaPredicted RBP9.47□□□□□ -0.89
USP34-207ENST00000463046 ACIN1Q9UKV3 1341 aaKnown RBP9.44□□□□□ -0.9
USP34-207ENST00000463046 PDS5BQ9NTI5 1447 aa9.41□□□□□ -0.9
USP34-207ENST00000463046 NCAPD3P42695 1498 aa9.4□□□□□ -0.91
USP34-207ENST00000463046 ABCC8Q09428 1581 aa9.38□□□□□ -0.91
USP34-207ENST00000463046 UBTFP17480 764 aaKnown RBP9.38□□□□□ -0.91
USP34-207ENST00000463046 CHIC1Q5VXU3 224 aa9.36□□□□□ -0.91
USP34-207ENST00000463046 CSRNP3Q8WYN3 585 aa9.31□□□□□ -0.92
USP34-207ENST00000463046 ATAD2BQ9ULI0 1458 aa9.31□□□□□ -0.92
USP34-207ENST00000463046 CDK11AQ9UQ88 783 aaPredicted RBP9.3□□□□□ -0.92
USP34-207ENST00000463046 CADPSQ9ULU8 1353 aa9.29□□□□□ -0.92
USP34-207ENST00000463046 ZEB1P37275 1124 aaPredicted RBP9.28□□□□□ -0.92
USP34-207ENST00000463046 TOP2AP11388 1531 aaKnown RBP9.28□□□□□ -0.92
USP34-207ENST00000463046 HMGXB3Q12766 1538 aa9.28□□□□□ -0.92
USP34-207ENST00000463046 WRNQ14191 1432 aaPredicted RBP eCLIP9.25□□□□□ -0.93
USP34-207ENST00000463046 KIF27Q86VH2 1401 aa9.25□□□□□ -0.93
USP34-207ENST00000463046 CECR2Q9BXF3 1484 aa9.24□□□□□ -0.93
USP34-207ENST00000463046 AEBP2Q6ZN18 517 aaPredicted RBP9.22□□□□□ -0.93
USP34-207ENST00000463046 SMARCA4P51532 1647 aa9.21□□□□□ -0.93
USP34-207ENST00000463046 ERCC6Q03468 1493 aa9.18□□□□□ -0.94
USP34-207ENST00000463046 MROH2BQ7Z745 1585 aa9.17□□□□□ -0.94
USP34-207ENST00000463046 CEP164Q9UPV0 1460 aa9.16□□□□□ -0.94
USP34-207ENST00000463046 EIF4G1Q04637 1599 aaKnown RBP9.16□□□□□ -0.94
USP34-207ENST00000463046 NPM1P06748 294 aaKnown RBP eCLIP9.15□□□□□ -0.95
USP34-207ENST00000463046 PEG3Q9GZU2 1588 aa9.13□□□□□ -0.95
USP34-207ENST00000463046 CHMP7Q8WUX9 453 aaPredicted RBP9.09□□□□□ -0.95
USP34-207ENST00000463046 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
USP34-207ENST00000463046 GOLGA3Q08378 1498 aa9.08□□□□□ -0.96
USP34-207ENST00000463046 CFTRP13569 1480 aa9.07□□□□□ -0.96
USP34-207ENST00000463046 FHAD1B1AJZ9 1412 aa9.06□□□□□ -0.96
USP34-207ENST00000463046 TNIKQ9UKE5 1360 aa9.05□□□□□ -0.96
USP34-207ENST00000463046 CARMIL2Q6F5E8 1435 aa9.05□□□□□ -0.96
USP34-207ENST00000463046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.04□□□□□ -0.96
USP34-207ENST00000463046 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
USP34-207ENST00000463046 BICRAQ9NZM4 1560 aa9.03□□□□□ -0.96
USP34-207ENST00000463046 TRIM26Q12899 539 aaPredicted RBP9.02□□□□□ -0.96
USP34-207ENST00000463046 ATP1B4Q9UN42 357 aaPredicted RBP9.02□□□□□ -0.96
USP34-207ENST00000463046 FANCD2Q9BXW9 1451 aa9.01□□□□□ -0.97
USP34-207ENST00000463046 SOGA1O94964 1423 aa9□□□□□ -0.97
USP34-207ENST00000463046 LAMC3Q9Y6N6 1575 aa8.99□□□□□ -0.97
USP34-207ENST00000463046 CARMIL1Q5VZK9 1371 aa8.99□□□□□ -0.97
USP34-207ENST00000463046 TRHP20396 242 aaPredicted RBP8.99□□□□□ -0.97
USP34-207ENST00000463046 FBLN2P98095 1184 aa8.98□□□□□ -0.97
USP34-207ENST00000463046 CUX2O14529 1486 aa8.96□□□□□ -0.97
USP34-207ENST00000463046 IFT140Q96RY7 1462 aa8.96□□□□□ -0.97
USP34-207ENST00000463046 CLIP1P30622 1438 aa8.95□□□□□ -0.98
USP34-207ENST00000463046 FMN1Q68DA7 1419 aa8.95□□□□□ -0.98
USP34-207ENST00000463046 MRC2Q9UBG0 1479 aa8.95□□□□□ -0.98
USP34-207ENST00000463046 PLEKHD1A6NEE1 506 aa8.93□□□□□ -0.98
USP34-207ENST00000463046 RSPH4AQ5TD94 716 aa8.92□□□□□ -0.98
USP34-207ENST00000463046 MYT1Q01538 1121 aa8.91□□□□□ -0.98
USP34-207ENST00000463046 PELP1Q8IZL8 1130 aaKnown RBP8.91□□□□□ -0.98
USP34-207ENST00000463046 RAPGEF2Q9Y4G8 1499 aa8.91□□□□□ -0.98
USP34-207ENST00000463046 CC2D2AQ9P2K1 1620 aa8.9□□□□□ -0.99
USP34-207ENST00000463046 GRIN2BQ13224 1484 aa8.88□□□□□ -0.99
USP34-207ENST00000463046 CEP162Q5TB80 1403 aa8.88□□□□□ -0.99
USP34-207ENST00000463046 MTUS2Q5JR59 1369 aa8.88□□□□□ -0.99
USP34-207ENST00000463046 DNAJC5Q9H3Z4 198 aa8.87□□□□□ -0.99
USP34-207ENST00000463046 TSPY4P0CV99 314 aa8.87□□□□□ -0.99
USP34-207ENST00000463046 TSPY10P0CW01 314 aa8.87□□□□□ -0.99
USP34-207ENST00000463046 SLC24A1O60721 1099 aa8.86□□□□□ -0.99
USP34-207ENST00000463046 MYT1LQ9UL68 1186 aa8.86□□□□□ -0.99
USP34-207ENST00000463046 WIZO95785 1651 aa8.85□□□□□ -0.99
USP34-207ENST00000463046 RANGAP1P46060 587 aaPredicted RBP8.84□□□□□ -0.99
USP34-207ENST00000463046 CLSPNQ9HAW4 1339 aa8.84□□□□□ -1
USP34-207ENST00000463046 CCER1Q8TC90 406 aaPredicted RBP8.83□□□□□ -1
USP34-207ENST00000463046 DNMBPQ6XZF7 1577 aa8.83□□□□□ -1
USP34-207ENST00000463046 OSCARQ8IYS5 282 aa8.83□□□□□ -1
USP34-207ENST00000463046 GAPVD1Q14C86 1478 aa8.83□□□□□ -1
USP34-207ENST00000463046 ERICH3Q5RHP9 1530 aa8.82□□□□□ -1
USP34-207ENST00000463046 EHMT2Q96KQ7 1210 aa8.82□□□□□ -1
USP34-207ENST00000463046 ESF1Q9H501 851 aaKnown RBP8.82□□□□□ -1
USP34-207ENST00000463046 WDR97A6NE52 1622 aa8.81□□□□□ -1
USP34-207ENST00000463046 TIMELESSQ9UNS1 1208 aa8.8□□□□□ -1
USP34-207ENST00000463046 ABCA10Q8WWZ4 1543 aa8.8□□□□□ -1
USP34-207ENST00000463046 VPS8Q8N3P4 1428 aa8.79□□□□□ -1
USP34-207ENST00000463046 FGD5Q6ZNL6 1462 aa8.79□□□□□ -1
USP34-207ENST00000463046 MAGI1Q96QZ7 1491 aaPredicted RBP8.79□□□□□ -1
USP34-207ENST00000463046 TOPBP1Q92547 1522 aa8.78□□□□□ -1
USP34-207ENST00000463046 TDRD9Q8NDG6 1382 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms