RNA–Protein interactions for RNA: ENST00000570557.5

CHRNB1-203, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 5

Gene CHRNB1, Length 947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-203ENST00000570557 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
CHRNB1-203ENST00000570557 CCDC180Q9P1Z9 1646 aa28.33■■■□□ 2.13
CHRNB1-203ENST00000570557 ABCC9O60706 1549 aa27.72■■■□□ 2.03
CHRNB1-203ENST00000570557 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
CHRNB1-203ENST00000570557 NACADO15069 1562 aa26.65■■□□□ 1.86
CHRNB1-203ENST00000570557 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
CHRNB1-203ENST00000570557 ZCCHC6Q5VYS8 1495 aaKnown RBP26.5■■□□□ 1.83
CHRNB1-203ENST00000570557 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
CHRNB1-203ENST00000570557 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
CHRNB1-203ENST00000570557 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
CHRNB1-203ENST00000570557 BICRAQ9NZM4 1560 aa25.93■■□□□ 1.74
CHRNB1-203ENST00000570557 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
CHRNB1-203ENST00000570557 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
CHRNB1-203ENST00000570557 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
CHRNB1-203ENST00000570557 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
CHRNB1-203ENST00000570557 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
CHRNB1-203ENST00000570557 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
CHRNB1-203ENST00000570557 CECR2Q9BXF3 1484 aa24.93■■□□□ 1.58
CHRNB1-203ENST00000570557 SMARCA4P51532 1647 aa24.7■■□□□ 1.54
CHRNB1-203ENST00000570557 BAZ1AQ9NRL2 1556 aaPredicted RBP24.64■■□□□ 1.54
CHRNB1-203ENST00000570557 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
CHRNB1-203ENST00000570557 ATAD2BQ9ULI0 1458 aa24.59■■□□□ 1.53
CHRNB1-203ENST00000570557 SMARCA2P51531 1590 aa24.54■■□□□ 1.52
CHRNB1-203ENST00000570557 MROH2BQ7Z745 1585 aa24.52■■□□□ 1.52
CHRNB1-203ENST00000570557 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
CHRNB1-203ENST00000570557 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
CHRNB1-203ENST00000570557 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
CHRNB1-203ENST00000570557 WIZO95785 1651 aa24.24■■□□□ 1.47
CHRNB1-203ENST00000570557 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
CHRNB1-203ENST00000570557 NESP48681 1621 aa23.99■■□□□ 1.43
CHRNB1-203ENST00000570557 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
CHRNB1-203ENST00000570557 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
CHRNB1-203ENST00000570557 CADPSQ9ULU8 1353 aa23.86■■□□□ 1.41
CHRNB1-203ENST00000570557 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
CHRNB1-203ENST00000570557 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
CHRNB1-203ENST00000570557 CFTRP13569 1480 aa23.73■■□□□ 1.39
CHRNB1-203ENST00000570557 KIF21AQ7Z4S6 1674 aa23.71■■□□□ 1.39
CHRNB1-203ENST00000570557 CCDC88BA6NC98 1476 aa23.71■■□□□ 1.39
CHRNB1-203ENST00000570557 CUX2O14529 1486 aa23.71■■□□□ 1.39
CHRNB1-203ENST00000570557 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
CHRNB1-203ENST00000570557 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
CHRNB1-203ENST00000570557 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
CHRNB1-203ENST00000570557 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
CHRNB1-203ENST00000570557 CEP164Q9UPV0 1460 aa23.52■■□□□ 1.36
CHRNB1-203ENST00000570557 WDR62O43379 1518 aa23.48■■□□□ 1.35
CHRNB1-203ENST00000570557 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
CHRNB1-203ENST00000570557 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
CHRNB1-203ENST00000570557 TOPBP1Q92547 1522 aa23.19■■□□□ 1.3
CHRNB1-203ENST00000570557 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
CHRNB1-203ENST00000570557 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
CHRNB1-203ENST00000570557 DNAJC5Q9H3Z4 198 aa23.07■■□□□ 1.28
CHRNB1-203ENST00000570557 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
CHRNB1-203ENST00000570557 CUX1P39880 1505 aa23.01■■□□□ 1.27
CHRNB1-203ENST00000570557 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
CHRNB1-203ENST00000570557 TARBP1Q13395 1621 aaKnown RBP22.98■■□□□ 1.27
CHRNB1-203ENST00000570557 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
CHRNB1-203ENST00000570557 FGD5Q6ZNL6 1462 aa22.91■■□□□ 1.26
CHRNB1-203ENST00000570557 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
CHRNB1-203ENST00000570557 SOGA1O94964 1423 aa22.88■■□□□ 1.25
CHRNB1-203ENST00000570557 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
CHRNB1-203ENST00000570557 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.24
CHRNB1-203ENST00000570557 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
CHRNB1-203ENST00000570557 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
CHRNB1-203ENST00000570557 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
CHRNB1-203ENST00000570557 TOP2BQ02880 1626 aa22.79■■□□□ 1.24
CHRNB1-203ENST00000570557 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
CHRNB1-203ENST00000570557 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
CHRNB1-203ENST00000570557 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
CHRNB1-203ENST00000570557 OSCARQ8IYS5 282 aa22.68■■□□□ 1.22
CHRNB1-203ENST00000570557 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
CHRNB1-203ENST00000570557 GRIN2BQ13224 1484 aa22.62■■□□□ 1.21
CHRNB1-203ENST00000570557 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
CHRNB1-203ENST00000570557 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
CHRNB1-203ENST00000570557 CHD1O14646 1710 aa22.58■■□□□ 1.21
CHRNB1-203ENST00000570557 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.2
CHRNB1-203ENST00000570557 PBRM1Q86U86 1689 aa22.57■■□□□ 1.2
CHRNB1-203ENST00000570557 SYNJ2O15056 1496 aa22.49■■□□□ 1.19
CHRNB1-203ENST00000570557 FBLN2P98095 1184 aa22.45■■□□□ 1.18
CHRNB1-203ENST00000570557 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
CHRNB1-203ENST00000570557 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
CHRNB1-203ENST00000570557 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
CHRNB1-203ENST00000570557 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
CHRNB1-203ENST00000570557 FHAD1B1AJZ9 1412 aa22.36■■□□□ 1.17
CHRNB1-203ENST00000570557 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
CHRNB1-203ENST00000570557 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
CHRNB1-203ENST00000570557 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
CHRNB1-203ENST00000570557 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
CHRNB1-203ENST00000570557 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
CHRNB1-203ENST00000570557 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
CHRNB1-203ENST00000570557 IGF1RP08069 1367 aa22.29■■□□□ 1.16
CHRNB1-203ENST00000570557 NUP160Q12769 1436 aa22.28■■□□□ 1.16
CHRNB1-203ENST00000570557 CEP170Q5SW79 1584 aa22.24■■□□□ 1.15
CHRNB1-203ENST00000570557 CUL7Q14999 1698 aa22.2■■□□□ 1.14
CHRNB1-203ENST00000570557 ARAP1Q96P48 1450 aa22.16■■□□□ 1.14
CHRNB1-203ENST00000570557 TRIM41Q8WV44 630 aa22.16■■□□□ 1.14
CHRNB1-203ENST00000570557 RUSC2Q8N2Y8 1516 aa22.13■■□□□ 1.13
CHRNB1-203ENST00000570557 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
CHRNB1-203ENST00000570557 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
CHRNB1-203ENST00000570557 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
CHRNB1-203ENST00000570557 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms