RNA–Protein interactions for RNA: ENST00000453734.1

USP34-205, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 1 (best)

Gene USP34, Length 2,708 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-205ENST00000453734 AEBP2Q6ZN18 517 aaPredicted RBP13.01□□□□□ -0.33
USP34-205ENST00000453734 CHIC1Q5VXU3 224 aa12.83□□□□□ -0.35
USP34-205ENST00000453734 PHF23Q9BUL5 403 aaPredicted RBP11.39□□□□□ -0.59
USP34-205ENST00000453734 SENP3Q9H4L4 574 aaPredicted RBP10.9□□□□□ -0.66
USP34-205ENST00000453734 PLPPR3Q6T4P5 718 aa10.52□□□□□ -0.72
USP34-205ENST00000453734 FOXD1Q16676 465 aa10.17□□□□□ -0.78
USP34-205ENST00000453734 PPP6R1Q9UPN7 881 aa10.03□□□□□ -0.8
USP34-205ENST00000453734 ADRA2BP18089 450 aa10.02□□□□□ -0.81
USP34-205ENST00000453734 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
USP34-205ENST00000453734 KCNA4P22459 653 aa9.45□□□□□ -0.9
USP34-205ENST00000453734 PPP4R3CPQ6ZMV5 832 aa9.33□□□□□ -0.92
USP34-205ENST00000453734 MSH5O43196 834 aa9.18□□□□□ -0.94
USP34-205ENST00000453734 EHMT2Q96KQ7 1210 aa9.12□□□□□ -0.95
USP34-205ENST00000453734 NCBP3Q53F19 620 aaKnown RBP9.08□□□□□ -0.96
USP34-205ENST00000453734 NPM3O75607 178 aaKnown RBP9.04□□□□□ -0.96
USP34-205ENST00000453734 MAPK8IP2Q13387 824 aaPredicted RBP9.04□□□□□ -0.96
USP34-205ENST00000453734 SCAF1Q9H7N4 1312 aaKnown RBP9.02□□□□□ -0.97
USP34-205ENST00000453734 SLC4A1APQ9BWU0 796 aaKnown RBP8.98□□□□□ -0.97
USP34-205ENST00000453734 CNKSR2Q8WXI2 1034 aa8.97□□□□□ -0.97
USP34-205ENST00000453734 CSRNP3Q8WYN3 585 aa8.82□□□□□ -1
USP34-205ENST00000453734 RNF216Q9NWF9 866 aaPredicted RBP8.74□□□□□ -1.01
USP34-205ENST00000453734 DMRT2Q9Y5R5 561 aa8.74□□□□□ -1.01
USP34-205ENST00000453734 ZBTB22O15209 634 aa8.72□□□□□ -1.01
USP34-205ENST00000453734 HOXD11P31277 338 aaPredicted RBP8.63□□□□□ -1.03
USP34-205ENST00000453734 DNAJC5BQ9UF47 199 aa8.56□□□□□ -1.04
USP34-205ENST00000453734 FOXD4L1Q9NU39 408 aa8.54□□□□□ -1.04
USP34-205ENST00000453734 SLC4A2P04920 1241 aa8.5□□□□□ -1.05
USP34-205ENST00000453734 DCAF8L1A6NGE4 600 aa8.49□□□□□ -1.05
USP34-205ENST00000453734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.3□□□□□ -1.081e-6■■□□□ 13.2
USP34-205ENST00000453734 MYCNP04198 464 aaPredicted RBP8.29□□□□□ -1.08
USP34-205ENST00000453734 U3KPZ7 1027 aaPredicted RBP8.19□□□□□ -1.1
USP34-205ENST00000453734 ATF5Q9Y2D1 282 aaPredicted RBP8.17□□□□□ -1.1
USP34-205ENST00000453734 ATXN8OSP0DMR3 200 aa8.14□□□□□ -1.11
USP34-205ENST00000453734 SAMD1Q6SPF0 538 aaPredicted RBP8.07□□□□□ -1.12
USP34-205ENST00000453734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.06□□□□□ -1.12
USP34-205ENST00000453734 HNRNPUL2Q1KMD3 747 aaKnown RBP8.06□□□□□ -1.12
USP34-205ENST00000453734 POTEDQ86YR6 584 aa8.05□□□□□ -1.12
USP34-205ENST00000453734 FKBP8Q14318 412 aa7.98□□□□□ -1.13
USP34-205ENST00000453734 SPINK5Q9NQ38 1064 aaPredicted RBP7.96□□□□□ -1.14
USP34-205ENST00000453734 RNF39Q9H2S5 420 aa7.94□□□□□ -1.14
USP34-205ENST00000453734 ZNF219Q9P2Y4 722 aaPredicted RBP7.94□□□□□ -1.14
USP34-205ENST00000453734 TRHP20396 242 aaPredicted RBP7.93□□□□□ -1.14
USP34-205ENST00000453734 CAPN15O75808 1086 aa7.88□□□□□ -1.15
USP34-205ENST00000453734 APLP2Q06481 763 aa7.87□□□□□ -1.15
USP34-205ENST00000453734 POLA2Q14181 598 aa7.83□□□□□ -1.16
USP34-205ENST00000453734 C1QBPQ07021 282 aaKnown RBP7.81□□□□□ -1.16
USP34-205ENST00000453734 ABCB7O75027 752 aa7.8□□□□□ -1.16
USP34-205ENST00000453734 MKRN4PQ13434 485 aaPredicted RBP7.79□□□□□ -1.16
USP34-205ENST00000453734 RTN4Q9NQC3 1192 aaKnown RBP7.71□□□□□ -1.18
USP34-205ENST00000453734 SPDYE4A6NLX3 237 aa7.7□□□□□ -1.18
USP34-205ENST00000453734 FBLN2P98095 1184 aa7.69□□□□□ -1.18
USP34-205ENST00000453734 DSG3P32926 999 aa7.66□□□□□ -1.18
USP34-205ENST00000453734 CACNB1Q02641 598 aaPredicted RBP7.6□□□□□ -1.19
USP34-205ENST00000453734 AMER1Q5JTC6 1135 aaPredicted RBP7.58□□□□□ -1.2
USP34-205ENST00000453734 OSCARQ8IYS5 282 aa7.57□□□□□ -1.2
USP34-205ENST00000453734 ZBTB12Q9Y330 459 aaPredicted RBP7.57□□□□□ -1.2
USP34-205ENST00000453734 PROM2Q8N271 834 aa7.53□□□□□ -1.2
USP34-205ENST00000453734 FBXO3Q9UK99 471 aa7.51□□□□□ -1.21
USP34-205ENST00000453734 ZNF692Q9BU19 519 aaPredicted RBP7.51□□□□□ -1.21
USP34-205ENST00000453734 VASPP50552 380 aaPredicted RBP7.48□□□□□ -1.21
USP34-205ENST00000453734 SPDYE2BA6NHP3 402 aa7.43□□□□□ -1.22
USP34-205ENST00000453734 SPDYE6P0CI01 402 aa7.43□□□□□ -1.22
USP34-205ENST00000453734 SPDYE2Q495Y8 402 aa7.43□□□□□ -1.22
USP34-205ENST00000453734 PABPN1Q86U42 306 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP34-205ENST00000453734 IFNLR1Q8IU57 520 aaPredicted RBP7.43□□□□□ -1.22
USP34-205ENST00000453734 SSUH2Q9Y2M2 353 aa7.41□□□□□ -1.22
USP34-205ENST00000453734 KLHL34Q8N239 644 aa7.32□□□□□ -1.24
USP34-205ENST00000453734 PLCD3Q8N3E9 789 aa7.32□□□□□ -1.24
USP34-205ENST00000453734 MIER1Q8N108 512 aa7.3□□□□□ -1.24
USP34-205ENST00000453734 SLC24A1O60721 1099 aa7.28□□□□□ -1.24
USP34-205ENST00000453734 STAG3Q9UJ98 1225 aa7.27□□□□□ -1.25
USP34-205ENST00000453734 DCAF8L2P0C7V8 631 aa7.26□□□□□ -1.25
USP34-205ENST00000453734 PKD2Q13563 968 aa7.26□□□□□ -1.25
USP34-205ENST00000453734 CLEC11AQ9Y240 323 aa7.24□□□□□ -1.25
USP34-205ENST00000453734 SPOCK2Q92563 424 aa7.22□□□□□ -1.25
USP34-205ENST00000453734 RBM42Q9BTD8 480 aaKnown RBP7.21□□□□□ -1.25
USP34-205ENST00000453734 AKT1S1Q96B36 256 aa7.19□□□□□ -1.26
USP34-205ENST00000453734 REM2Q8IYK8 340 aaPredicted RBP7.18□□□□□ -1.26
USP34-205ENST00000453734 PLEKHG5O94827 1062 aa7.17□□□□□ -1.26
USP34-205ENST00000453734 SPDYE1Q8NFV5 336 aaPredicted RBP7.16□□□□□ -1.26
USP34-205ENST00000453734 ECM2O94769 699 aaPredicted RBP7.16□□□□□ -1.26
USP34-205ENST00000453734 CIZ1Q9ULV3 898 aaPredicted RBP7.16□□□□□ -1.26
USP34-205ENST00000453734 PRR29P0C7W0 189 aa7.14□□□□□ -1.27
USP34-205ENST00000453734 PITPNM1O00562 1244 aa7.12□□□□□ -1.27
USP34-205ENST00000453734 RGL2O15211 777 aa7.12□□□□□ -1.27
USP34-205ENST00000453734 ZBTB47Q9UFB7 747 aaPredicted RBP7.11□□□□□ -1.27
USP34-205ENST00000453734 CREBZFQ9NS37 354 aa7.09□□□□□ -1.27
USP34-205ENST00000453734 MNX1P50219 401 aaPredicted RBP7.06□□□□□ -1.28
USP34-205ENST00000453734 PLCB2Q00722 1185 aa7.06□□□□□ -1.28
USP34-205ENST00000453734 NPM1P06748 294 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP34-205ENST00000453734 CHADLQ6NUI6 762 aa7.06□□□□□ -1.28
USP34-205ENST00000453734 NUBP1P53384 320 aa7.05□□□□□ -1.28
USP34-205ENST00000453734 DCAF8Q5TAQ9 597 aa7.03□□□□□ -1.28
USP34-205ENST00000453734 RASEFQ8IZ41 740 aa7.02□□□□□ -1.29
USP34-205ENST00000453734 RNF25Q96BH1 459 aaPredicted RBP7.02□□□□□ -1.29
USP34-205ENST00000453734 CHGAP10645 457 aaKnown RBP7□□□□□ -1.29
USP34-205ENST00000453734 HAP1P54257 671 aaPredicted RBP7□□□□□ -1.29
USP34-205ENST00000453734 FAM212AQ96EL1 285 aa6.99□□□□□ -1.29
USP34-205ENST00000453734 GSE1Q14687 1217 aa6.98□□□□□ -1.29
USP34-205ENST00000453734 CFAP44Q96MT7 982 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms