RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, humanhuman

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-222ENST00000561152 NISCHQ9Y2I1 1504 aa62.31■■■■■ 7.57
TCF12-222ENST00000561152 CCDC180Q9P1Z9 1646 aa55.42■■■■■ 6.46
TCF12-222ENST00000561152 ABCC9O60706 1549 aa54.02■■■■■ 6.24
TCF12-222ENST00000561152 RB1CC1Q8TDY2 1594 aa52.11■■■■■ 5.93
TCF12-222ENST00000561152 NACADO15069 1562 aa52.07■■■■■ 5.93
TCF12-222ENST00000561152 DCAF8L2P0C7V8 631 aa52■■■■■ 5.91
TCF12-222ENST00000561152 ZCCHC6Q5VYS8 1495 aaKnown RBP51.92■■■■■ 5.9
TCF12-222ENST00000561152 MYO15BQ96JP2 1530 aa51.8■■■■■ 5.88
TCF12-222ENST00000561152 DCAF1Q9Y4B6 1507 aa51.61■■■■■ 5.85
TCF12-222ENST00000561152 UNC13AQ9UPW8 1703 aa50.87■■■■■ 5.73
TCF12-222ENST00000561152 SCRIBQ14160 1630 aa50.51■■■■■ 5.68
TCF12-222ENST00000561152 PABPN1Q86U42 306 aaKnown RBP eCLIP50.46■■■■■ 5.67
TCF12-222ENST00000561152 BICRAQ9NZM4 1560 aa50.43■■■■■ 5.66
TCF12-222ENST00000561152 SHROOM4Q9ULL8 1493 aa50.04■■■■■ 5.6
TCF12-222ENST00000561152 DNAJC5BQ9UF47 199 aa49.38■■■■■ 5.5
TCF12-222ENST00000561152 EIF4G1Q04637 1599 aaKnown RBP49.13■■■■■ 5.46
TCF12-222ENST00000561152 CC2D2AQ9P2K1 1620 aa48.9■■■■■ 5.42
TCF12-222ENST00000561152 CECR2Q9BXF3 1484 aa48.55■■■■■ 5.36
TCF12-222ENST00000561152 SMARCA4P51532 1647 aa48.34■■■■■ 5.33
TCF12-222ENST00000561152 BAZ1AQ9NRL2 1556 aaPredicted RBP48.34■■■■■ 5.33
TCF12-222ENST00000561152 SMARCA2P51531 1590 aa48.04■■■■■ 5.28
TCF12-222ENST00000561152 ATAD2BQ9ULI0 1458 aa48.03■■■■■ 5.28
TCF12-222ENST00000561152 NCAPD3P42695 1498 aa48■■■■■ 5.27
TCF12-222ENST00000561152 MROH2BQ7Z745 1585 aa47.98■■■■■ 5.27
TCF12-222ENST00000561152 PEG3Q9GZU2 1588 aa47.88■■■■■ 5.26
TCF12-222ENST00000561152 HMGXB3Q12766 1538 aa47.81■■■■■ 5.24
TCF12-222ENST00000561152 BAZ1BQ9UIG0 1483 aaKnown RBP47.68■■■■■ 5.22
TCF12-222ENST00000561152 WIZO95785 1651 aa47.49■■■■■ 5.19
TCF12-222ENST00000561152 RSF1Q96T23 1441 aaPredicted RBP47.48■■■■■ 5.19
TCF12-222ENST00000561152 TOP2AP11388 1531 aaKnown RBP47.04■■■■■ 5.12
TCF12-222ENST00000561152 LAMC3Q9Y6N6 1575 aa46.77■■■■■ 5.08
TCF12-222ENST00000561152 NESP48681 1621 aa46.75■■■■■ 5.07
TCF12-222ENST00000561152 ERCC6Q03468 1493 aa46.63■■■■■ 5.05
TCF12-222ENST00000561152 CADPSQ9ULU8 1353 aa46.6■■■■■ 5.05
TCF12-222ENST00000561152 PDS5BQ9NTI5 1447 aa46.45■■■■■ 5.03
TCF12-222ENST00000561152 CCDC88BA6NC98 1476 aa46.44■■■■■ 5.02
TCF12-222ENST00000561152 SUPT5HO00267 1087 aaKnown RBP46.37■■■■■ 5.01
TCF12-222ENST00000561152 CFTRP13569 1480 aa46.35■■■■■ 5.01
TCF12-222ENST00000561152 KIF21AQ7Z4S6 1674 aa46.27■■■■■ 5
TCF12-222ENST00000561152 CUX2O14529 1486 aa46.1■■■■■ 4.97
TCF12-222ENST00000561152 PRDM2Q13029 1718 aa46.08■■■■■ 4.97
TCF12-222ENST00000561152 FANCD2Q9BXW9 1451 aa46.08■■■■■ 4.97
TCF12-222ENST00000561152 THOC2Q8NI27 1593 aaKnown RBP46.07■■■■■ 4.97
TCF12-222ENST00000561152 CEP164Q9UPV0 1460 aa46.04■■■■■ 4.96
TCF12-222ENST00000561152 MRC2Q9UBG0 1479 aa45.93■■■■■ 4.94
TCF12-222ENST00000561152 WDR62O43379 1518 aa45.77■■■■■ 4.92
TCF12-222ENST00000561152 URB2Q14146 1524 aaKnown RBP45.57■■■■■ 4.89
TCF12-222ENST00000561152 ABCC8Q09428 1581 aa45.43■■■■■ 4.86
TCF12-222ENST00000561152 TOPBP1Q92547 1522 aa45.35■■■■■ 4.85
TCF12-222ENST00000561152 DNMBPQ6XZF7 1577 aa45.33■■■■■ 4.85
TCF12-222ENST00000561152 IFT140Q96RY7 1462 aa45.07■■■■■ 4.81
TCF12-222ENST00000561152 CUX1P39880 1505 aa45.01■■■■■ 4.8
TCF12-222ENST00000561152 POLA1P09884 1462 aaPredicted RBP44.96■■■■■ 4.79
TCF12-222ENST00000561152 FGD5Q6ZNL6 1462 aa44.87■■■■■ 4.77
TCF12-222ENST00000561152 TARBP1Q13395 1621 aaKnown RBP44.83■■■■■ 4.77
TCF12-222ENST00000561152 WRNQ14191 1432 aaPredicted RBP eCLIP44.82■■■■■ 4.77
TCF12-222ENST00000561152 SOGA1O94964 1423 aa44.8■■■■■ 4.76
TCF12-222ENST00000561152 ZNF608Q9ULD9 1512 aaPredicted RBP44.77■■■■■ 4.76
TCF12-222ENST00000561152 RAD54L2Q9Y4B4 1467 aa44.73■■■■■ 4.75
TCF12-222ENST00000561152 TOP2BQ02880 1626 aa44.72■■■■■ 4.75
TCF12-222ENST00000561152 BIVM-ERCC5R4GMW8 1640 aa44.72■■■■■ 4.75
TCF12-222ENST00000561152 SYNJ1O43426 1573 aa44.66■■■■■ 4.74
TCF12-222ENST00000561152 EIF4G3O43432 1585 aaKnown RBP44.66■■■■■ 4.74
TCF12-222ENST00000561152 WDR97A6NE52 1622 aa44.59■■■■■ 4.73
TCF12-222ENST00000561152 AQRO60306 1485 aaKnown RBP eCLIP44.54■■■■■ 4.728e-11■□□□□ 8.6
TCF12-222ENST00000561152 TDRD9Q8NDG6 1382 aaKnown RBP44.49■■■■■ 4.71
TCF12-222ENST00000561152 DNAJC5Q9H3Z4 198 aa44.49■■■■■ 4.71
TCF12-222ENST00000561152 ABCA10Q8WWZ4 1543 aa44.46■■■■■ 4.71
TCF12-222ENST00000561152 GRIN2BQ13224 1484 aa44.28■■■■■ 4.68
TCF12-222ENST00000561152 GAPVD1Q14C86 1478 aa44.28■■■■■ 4.68
TCF12-222ENST00000561152 ABCA5Q8WWZ7 1642 aa44.27■■■■■ 4.68
TCF12-222ENST00000561152 PBRM1Q86U86 1689 aa44.21■■■■■ 4.67
TCF12-222ENST00000561152 OSCARQ8IYS5 282 aa44.19■■■■■ 4.66
TCF12-222ENST00000561152 SNAPC4Q5SXM2 1469 aa44.17■■■■■ 4.66
TCF12-222ENST00000561152 MAGI1Q96QZ7 1491 aaPredicted RBP44.17■■■■■ 4.66
TCF12-222ENST00000561152 CHD1O14646 1710 aa44.08■■■■■ 4.65
TCF12-222ENST00000561152 FBLN2P98095 1184 aa44.04■■■■■ 4.64
TCF12-222ENST00000561152 SYNJ2O15056 1496 aa43.98■■■■■ 4.63
TCF12-222ENST00000561152 ERICH3Q5RHP9 1530 aa43.96■■■■■ 4.63
TCF12-222ENST00000561152 CHMP7Q8WUX9 453 aaPredicted RBP43.96■■■■■ 4.63
TCF12-222ENST00000561152 KIF27Q86VH2 1401 aa43.9■■■■■ 4.62
TCF12-222ENST00000561152 ADAMTS12P58397 1594 aa43.84■■■■■ 4.61
TCF12-222ENST00000561152 TRIM41Q8WV44 630 aa43.84■■■■■ 4.61
TCF12-222ENST00000561152 FHAD1B1AJZ9 1412 aa43.8■■■■■ 4.6
TCF12-222ENST00000561152 GRIN2AQ12879 1464 aa43.7■■■■■ 4.59
TCF12-222ENST00000561152 IGF1RP08069 1367 aa43.64■■■■■ 4.58
TCF12-222ENST00000561152 CUL7Q14999 1698 aa43.61■■■■■ 4.57
TCF12-222ENST00000561152 CLASP1Q7Z460 1538 aa43.59■■■■■ 4.57
TCF12-222ENST00000561152 NUP160Q12769 1436 aa43.48■■■■■ 4.55
TCF12-222ENST00000561152 ARHGEF11O15085 1522 aa43.45■■■■■ 4.55
TCF12-222ENST00000561152 CEP170Q5SW79 1584 aa43.45■■■■■ 4.55
TCF12-222ENST00000561152 RIMBP3CA6NJZ7 1639 aa43.44■■■■■ 4.55
TCF12-222ENST00000561152 RIMBP3BA6NNM3 1639 aa43.44■■■■■ 4.55
TCF12-222ENST00000561152 RIMBP3Q9UFD9 1639 aa43.44■■■■■ 4.55
TCF12-222ENST00000561152 RUSC2Q8N2Y8 1516 aa43.42■■■■■ 4.54
TCF12-222ENST00000561152 CARMIL1Q5VZK9 1371 aa43.41■■■■■ 4.54
TCF12-222ENST00000561152 CHIC1Q5VXU3 224 aa43.32■■■■■ 4.53
TCF12-222ENST00000561152 RAPGEF2Q9Y4G8 1499 aa43.19■■■■■ 4.51
TCF12-222ENST00000561152 EEA1Q15075 1411 aa43.16■■■■■ 4.5
TCF12-222ENST00000561152 SHROOM2Q13796 1616 aa43.15■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms