RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 NISCHQ9Y2I1 1504 aa51.27■■■■■ 5.8
CHRNB1-204ENST00000572857 CCDC180Q9P1Z9 1646 aa45.68■■■■■ 4.9
CHRNB1-204ENST00000572857 ABCC9O60706 1549 aa45.55■■■■■ 4.88
CHRNB1-204ENST00000572857 RB1CC1Q8TDY2 1594 aa43.41■■■■■ 4.54
CHRNB1-204ENST00000572857 DCAF8L2P0C7V8 631 aa43.39■■■■■ 4.54
CHRNB1-204ENST00000572857 NACADO15069 1562 aa43.2■■■■■ 4.51
CHRNB1-204ENST00000572857 MYO15BQ96JP2 1530 aa42.68■■■■■ 4.42
CHRNB1-204ENST00000572857 PABPN1Q86U42 306 aaKnown RBP eCLIP42.58■■■■■ 4.41
CHRNB1-204ENST00000572857 ZCCHC6Q5VYS8 1495 aaKnown RBP42.54■■■■■ 4.4
CHRNB1-204ENST00000572857 DNAJC5BQ9UF47 199 aa42.44■■■■■ 4.38
CHRNB1-204ENST00000572857 DCAF1Q9Y4B6 1507 aa42.29■■■■■ 4.36
CHRNB1-204ENST00000572857 UNC13AQ9UPW8 1703 aa42.29■■■■■ 4.36
CHRNB1-204ENST00000572857 BICRAQ9NZM4 1560 aa42.1■■■■■ 4.33
CHRNB1-204ENST00000572857 SCRIBQ14160 1630 aa41.8■■■■■ 4.28
CHRNB1-204ENST00000572857 SHROOM4Q9ULL8 1493 aa41.53■■■■■ 4.24
CHRNB1-204ENST00000572857 EIF4G1Q04637 1599 aaKnown RBP41.07■■■■■ 4.16
CHRNB1-204ENST00000572857 CC2D2AQ9P2K1 1620 aa41.06■■■■■ 4.16
CHRNB1-204ENST00000572857 CECR2Q9BXF3 1484 aa40.96■■■■■ 4.15
CHRNB1-204ENST00000572857 NCAPD3P42695 1498 aa39.93■■■■□ 3.98
CHRNB1-204ENST00000572857 ATAD2BQ9ULI0 1458 aa39.88■■■■□ 3.97
CHRNB1-204ENST00000572857 SMARCA4P51532 1647 aa39.86■■■■□ 3.97
CHRNB1-204ENST00000572857 BAZ1AQ9NRL2 1556 aaPredicted RBP39.75■■■■□ 3.95
CHRNB1-204ENST00000572857 SMARCA2P51531 1590 aa39.74■■■■□ 3.95
CHRNB1-204ENST00000572857 HMGXB3Q12766 1538 aa39.59■■■■□ 3.93
CHRNB1-204ENST00000572857 MROH2BQ7Z745 1585 aa39.54■■■■□ 3.92
CHRNB1-204ENST00000572857 BAZ1BQ9UIG0 1483 aaKnown RBP39.52■■■■□ 3.92
CHRNB1-204ENST00000572857 PEG3Q9GZU2 1588 aa39.42■■■■□ 3.9
CHRNB1-204ENST00000572857 ERCC6Q03468 1493 aa39.3■■■■□ 3.88
CHRNB1-204ENST00000572857 NESP48681 1621 aa39.22■■■■□ 3.87
CHRNB1-204ENST00000572857 WIZO95785 1651 aa39.03■■■■□ 3.84
CHRNB1-204ENST00000572857 CUX2O14529 1486 aa39■■■■□ 3.83
CHRNB1-204ENST00000572857 LAMC3Q9Y6N6 1575 aa38.9■■■■□ 3.82
CHRNB1-204ENST00000572857 RSF1Q96T23 1441 aaPredicted RBP38.89■■■■□ 3.82
CHRNB1-204ENST00000572857 CADPSQ9ULU8 1353 aa38.79■■■■□ 3.8
CHRNB1-204ENST00000572857 PDS5BQ9NTI5 1447 aa38.77■■■■□ 3.8
CHRNB1-204ENST00000572857 DNAJC5Q9H3Z4 198 aa38.66■■■■□ 3.78
CHRNB1-204ENST00000572857 THOC2Q8NI27 1593 aaKnown RBP38.61■■■■□ 3.77
CHRNB1-204ENST00000572857 KIF21AQ7Z4S6 1674 aa38.58■■■■□ 3.77
CHRNB1-204ENST00000572857 TOP2AP11388 1531 aaKnown RBP38.56■■■■□ 3.76
CHRNB1-204ENST00000572857 CFTRP13569 1480 aa38.38■■■■□ 3.73
CHRNB1-204ENST00000572857 MRC2Q9UBG0 1479 aa38.38■■■■□ 3.73
CHRNB1-204ENST00000572857 FANCD2Q9BXW9 1451 aa38.33■■■■□ 3.73
CHRNB1-204ENST00000572857 CEP164Q9UPV0 1460 aa38.31■■■■□ 3.72
CHRNB1-204ENST00000572857 WDR62O43379 1518 aa38.21■■■■□ 3.71
CHRNB1-204ENST00000572857 CCDC88BA6NC98 1476 aa38.2■■■■□ 3.71
CHRNB1-204ENST00000572857 URB2Q14146 1524 aaKnown RBP37.96■■■■□ 3.67
CHRNB1-204ENST00000572857 PRDM2Q13029 1718 aa37.81■■■■□ 3.64
CHRNB1-204ENST00000572857 SUPT5HO00267 1087 aaKnown RBP37.64■■■■□ 3.62
CHRNB1-204ENST00000572857 TOPBP1Q92547 1522 aa37.62■■■■□ 3.61
CHRNB1-204ENST00000572857 ABCC8Q09428 1581 aa37.55■■■■□ 3.6
CHRNB1-204ENST00000572857 IFT140Q96RY7 1462 aa37.53■■■■□ 3.6
CHRNB1-204ENST00000572857 DNMBPQ6XZF7 1577 aa37.46■■■■□ 3.59
CHRNB1-204ENST00000572857 ZNF608Q9ULD9 1512 aaPredicted RBP37.46■■■■□ 3.59
CHRNB1-204ENST00000572857 OSCARQ8IYS5 282 aa37.44■■■■□ 3.58
CHRNB1-204ENST00000572857 POLA1P09884 1462 aaPredicted RBP37.26■■■■□ 3.56
CHRNB1-204ENST00000572857 TRIM41Q8WV44 630 aa37.23■■■■□ 3.55
CHRNB1-204ENST00000572857 AQRO60306 1485 aaKnown RBP eCLIP37.21■■■■□ 3.55
CHRNB1-204ENST00000572857 TARBP1Q13395 1621 aaKnown RBP37.18■■■■□ 3.54
CHRNB1-204ENST00000572857 RAD54L2Q9Y4B4 1467 aa37.18■■■■□ 3.54
CHRNB1-204ENST00000572857 SOGA1O94964 1423 aa37.18■■■■□ 3.54
CHRNB1-204ENST00000572857 EIF4G3O43432 1585 aaKnown RBP37.17■■■■□ 3.54
CHRNB1-204ENST00000572857 CUX1P39880 1505 aa37.1■■■■□ 3.53
CHRNB1-204ENST00000572857 FGD5Q6ZNL6 1462 aa37.1■■■■□ 3.53
CHRNB1-204ENST00000572857 TDRD9Q8NDG6 1382 aaKnown RBP37.08■■■■□ 3.53
CHRNB1-204ENST00000572857 FBLN2P98095 1184 aa37.01■■■■□ 3.52
CHRNB1-204ENST00000572857 SNAPC4Q5SXM2 1469 aa36.8■■■■□ 3.48
CHRNB1-204ENST00000572857 CHD1O14646 1710 aa36.79■■■■□ 3.48
CHRNB1-204ENST00000572857 WDR97A6NE52 1622 aa36.77■■■■□ 3.48
CHRNB1-204ENST00000572857 GRIN2BQ13224 1484 aa36.75■■■■□ 3.47
CHRNB1-204ENST00000572857 CHMP7Q8WUX9 453 aaPredicted RBP36.75■■■■□ 3.47
CHRNB1-204ENST00000572857 RIMBP3CA6NJZ7 1639 aa36.74■■■■□ 3.47
CHRNB1-204ENST00000572857 RIMBP3BA6NNM3 1639 aa36.74■■■■□ 3.47
CHRNB1-204ENST00000572857 RIMBP3Q9UFD9 1639 aa36.74■■■■□ 3.47
CHRNB1-204ENST00000572857 ARHGEF11O15085 1522 aa36.71■■■■□ 3.47
CHRNB1-204ENST00000572857 WRNQ14191 1432 aaPredicted RBP eCLIP36.69■■■■□ 3.46
CHRNB1-204ENST00000572857 GAPVD1Q14C86 1478 aa36.69■■■■□ 3.46
CHRNB1-204ENST00000572857 MAGI1Q96QZ7 1491 aaPredicted RBP36.68■■■■□ 3.46
CHRNB1-204ENST00000572857 ABCA10Q8WWZ4 1543 aa36.67■■■■□ 3.46
CHRNB1-204ENST00000572857 CYB5RLQ6IPT4 315 aa36.58■■■■□ 3.45
CHRNB1-204ENST00000572857 SYNJ2O15056 1496 aa36.57■■■■□ 3.45
CHRNB1-204ENST00000572857 TOP2BQ02880 1626 aa36.57■■■■□ 3.44
CHRNB1-204ENST00000572857 SYNJ1O43426 1573 aa36.57■■■■□ 3.44
CHRNB1-204ENST00000572857 BIVM-ERCC5R4GMW8 1640 aa36.52■■■■□ 3.44
CHRNB1-204ENST00000572857 ABCA5Q8WWZ7 1642 aa36.51■■■■□ 3.43
CHRNB1-204ENST00000572857 PBRM1Q86U86 1689 aa36.49■■■■□ 3.43
CHRNB1-204ENST00000572857 CLASP1Q7Z460 1538 aa36.42■■■■□ 3.42
CHRNB1-204ENST00000572857 ARAP1Q96P48 1450 aa36.39■■■■□ 3.42
CHRNB1-204ENST00000572857 GRIN2AQ12879 1464 aa36.26■■■■□ 3.4
CHRNB1-204ENST00000572857 FHAD1B1AJZ9 1412 aa36.24■■■■□ 3.39
CHRNB1-204ENST00000572857 ADAMTS12P58397 1594 aa36.23■■■■□ 3.39
CHRNB1-204ENST00000572857 ERICH3Q5RHP9 1530 aa36.19■■■■□ 3.38
CHRNB1-204ENST00000572857 NUP160Q12769 1436 aa36.11■■■■□ 3.37
CHRNB1-204ENST00000572857 CEP170Q5SW79 1584 aa36.08■■■■□ 3.37
CHRNB1-204ENST00000572857 TRHP20396 242 aaPredicted RBP36.08■■■■□ 3.37
CHRNB1-204ENST00000572857 KIF27Q86VH2 1401 aa35.98■■■■□ 3.35
CHRNB1-204ENST00000572857 ERCC6L2Q5T890 1561 aa35.94■■■■□ 3.34
CHRNB1-204ENST00000572857 IGF1RP08069 1367 aa35.94■■■■□ 3.34
CHRNB1-204ENST00000572857 JPH4Q96JJ6 628 aa35.88■■■■□ 3.33
CHRNB1-204ENST00000572857 SHROOM2Q13796 1616 aa35.82■■■■□ 3.32
CHRNB1-204ENST00000572857 PRG4Q92954 1404 aaPredicted RBP35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms