RNA–Protein interactions for RNA: ENST00000576360.1

CHRNB1-208, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNB1, Length 1,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-208ENST00000576360 NISCHQ9Y2I1 1504 aa22.84■■□□□ 1.25
CHRNB1-208ENST00000576360 ABCC9O60706 1549 aa21.32■■□□□ 1
CHRNB1-208ENST00000576360 CCDC180Q9P1Z9 1646 aa20.87■□□□□ 0.93
CHRNB1-208ENST00000576360 DNAJC5BQ9UF47 199 aa20.58■□□□□ 0.89
CHRNB1-208ENST00000576360 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
CHRNB1-208ENST00000576360 NACADO15069 1562 aa19.91■□□□□ 0.78
CHRNB1-208ENST00000576360 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
CHRNB1-208ENST00000576360 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
CHRNB1-208ENST00000576360 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
CHRNB1-208ENST00000576360 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
CHRNB1-208ENST00000576360 BICRAQ9NZM4 1560 aa19.51■□□□□ 0.71
CHRNB1-208ENST00000576360 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
CHRNB1-208ENST00000576360 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
CHRNB1-208ENST00000576360 DCAF8L2P0C7V8 631 aa19.37■□□□□ 0.69
CHRNB1-208ENST00000576360 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
CHRNB1-208ENST00000576360 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
CHRNB1-208ENST00000576360 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
CHRNB1-208ENST00000576360 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
CHRNB1-208ENST00000576360 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
CHRNB1-208ENST00000576360 CUX2O14529 1486 aa18.87■□□□□ 0.61
CHRNB1-208ENST00000576360 MYT1Q01538 1121 aa18.87■□□□□ 0.61
CHRNB1-208ENST00000576360 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
CHRNB1-208ENST00000576360 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
CHRNB1-208ENST00000576360 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
CHRNB1-208ENST00000576360 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
CHRNB1-208ENST00000576360 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
CHRNB1-208ENST00000576360 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
CHRNB1-208ENST00000576360 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
CHRNB1-208ENST00000576360 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
CHRNB1-208ENST00000576360 TTBK1Q5TCY1 1321 aaPredicted RBP18.11■□□□□ 0.49
CHRNB1-208ENST00000576360 NESP48681 1621 aa18.09■□□□□ 0.49
CHRNB1-208ENST00000576360 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
CHRNB1-208ENST00000576360 HRCP23327 699 aa18.05■□□□□ 0.48
CHRNB1-208ENST00000576360 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
CHRNB1-208ENST00000576360 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
CHRNB1-208ENST00000576360 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
CHRNB1-208ENST00000576360 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
CHRNB1-208ENST00000576360 KIF21AQ7Z4S6 1674 aa17.86■□□□□ 0.45
CHRNB1-208ENST00000576360 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
CHRNB1-208ENST00000576360 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.44
CHRNB1-208ENST00000576360 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
CHRNB1-208ENST00000576360 WDR62O43379 1518 aa17.81■□□□□ 0.44
CHRNB1-208ENST00000576360 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
CHRNB1-208ENST00000576360 MROH2BQ7Z745 1585 aa17.61■□□□□ 0.41
CHRNB1-208ENST00000576360 CEP164Q9UPV0 1460 aa17.6■□□□□ 0.41
CHRNB1-208ENST00000576360 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.4
CHRNB1-208ENST00000576360 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.4
CHRNB1-208ENST00000576360 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.4
CHRNB1-208ENST00000576360 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
CHRNB1-208ENST00000576360 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
CHRNB1-208ENST00000576360 ARHGEF11O15085 1522 aa17.48■□□□□ 0.39
CHRNB1-208ENST00000576360 WIZO95785 1651 aa17.46■□□□□ 0.39
CHRNB1-208ENST00000576360 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
CHRNB1-208ENST00000576360 CFTRP13569 1480 aa17.41■□□□□ 0.38
CHRNB1-208ENST00000576360 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
CHRNB1-208ENST00000576360 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
CHRNB1-208ENST00000576360 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
CHRNB1-208ENST00000576360 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
CHRNB1-208ENST00000576360 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
CHRNB1-208ENST00000576360 IFT140Q96RY7 1462 aa17.33■□□□□ 0.36
CHRNB1-208ENST00000576360 ARAP1Q96P48 1450 aa17.25■□□□□ 0.35
CHRNB1-208ENST00000576360 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
CHRNB1-208ENST00000576360 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
CHRNB1-208ENST00000576360 ABCC8Q09428 1581 aa17.17■□□□□ 0.34
CHRNB1-208ENST00000576360 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
CHRNB1-208ENST00000576360 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
CHRNB1-208ENST00000576360 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
CHRNB1-208ENST00000576360 TOPBP1Q92547 1522 aa17.08■□□□□ 0.33
CHRNB1-208ENST00000576360 CHD1O14646 1710 aa17.08■□□□□ 0.32
CHRNB1-208ENST00000576360 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
CHRNB1-208ENST00000576360 ERICH6Q7L0X2 663 aa17.01■□□□□ 0.31
CHRNB1-208ENST00000576360 PRKCSHP14314 528 aaPredicted RBP17■□□□□ 0.31
CHRNB1-208ENST00000576360 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
CHRNB1-208ENST00000576360 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
CHRNB1-208ENST00000576360 AQRO60306 1485 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHRNB1-208ENST00000576360 CLASP1Q7Z460 1538 aa16.97■□□□□ 0.31
CHRNB1-208ENST00000576360 FBLN2P98095 1184 aa16.96■□□□□ 0.31
CHRNB1-208ENST00000576360 WDR97A6NE52 1622 aa16.95■□□□□ 0.3
CHRNB1-208ENST00000576360 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
CHRNB1-208ENST00000576360 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
CHRNB1-208ENST00000576360 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
CHRNB1-208ENST00000576360 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
CHRNB1-208ENST00000576360 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
CHRNB1-208ENST00000576360 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
CHRNB1-208ENST00000576360 ACIN1Q9UKV3 1341 aaKnown RBP16.85■□□□□ 0.29
CHRNB1-208ENST00000576360 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
CHRNB1-208ENST00000576360 APLP2Q06481 763 aa16.84■□□□□ 0.29
CHRNB1-208ENST00000576360 CHMP7Q8WUX9 453 aaPredicted RBP16.84■□□□□ 0.29
CHRNB1-208ENST00000576360 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
CHRNB1-208ENST00000576360 SNAPC4Q5SXM2 1469 aa16.81■□□□□ 0.28
CHRNB1-208ENST00000576360 SOGA1O94964 1423 aa16.79■□□□□ 0.28
CHRNB1-208ENST00000576360 SYNJ2O15056 1496 aa16.79■□□□□ 0.28
CHRNB1-208ENST00000576360 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.27
CHRNB1-208ENST00000576360 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
CHRNB1-208ENST00000576360 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
CHRNB1-208ENST00000576360 ILDR1Q86SU0 546 aaPredicted RBP16.72■□□□□ 0.27
CHRNB1-208ENST00000576360 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
CHRNB1-208ENST00000576360 FGD5Q6ZNL6 1462 aa16.63■□□□□ 0.25
CHRNB1-208ENST00000576360 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
CHRNB1-208ENST00000576360 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms