RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 NISCHQ9Y2I1 1504 aa20.81■□□□□ 0.92
TSC2-223ENST00000568566 ABCC9O60706 1549 aa19.06■□□□□ 0.64
TSC2-223ENST00000568566 CCDC180Q9P1Z9 1646 aa18.79■□□□□ 0.6
TSC2-223ENST00000568566 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
TSC2-223ENST00000568566 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
TSC2-223ENST00000568566 NACADO15069 1562 aa17.8■□□□□ 0.44
TSC2-223ENST00000568566 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
TSC2-223ENST00000568566 DCAF8L2P0C7V8 631 aa17.68■□□□□ 0.42
TSC2-223ENST00000568566 UNC13AQ9UPW8 1703 aa17.62■□□□□ 0.41
TSC2-223ENST00000568566 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
TSC2-223ENST00000568566 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
TSC2-223ENST00000568566 ZCCHC6Q5VYS8 1495 aaKnown RBP17.21■□□□□ 0.35
TSC2-223ENST00000568566 SHROOM4Q9ULL8 1493 aa17.2■□□□□ 0.34
TSC2-223ENST00000568566 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
TSC2-223ENST00000568566 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
TSC2-223ENST00000568566 SCRIBQ14160 1630 aa17.16■□□□□ 0.34
TSC2-223ENST00000568566 DCAF1Q9Y4B6 1507 aa17.14■□□□□ 0.33
TSC2-223ENST00000568566 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
TSC2-223ENST00000568566 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
TSC2-223ENST00000568566 CUX2O14529 1486 aa16.49■□□□□ 0.23
TSC2-223ENST00000568566 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
TSC2-223ENST00000568566 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
TSC2-223ENST00000568566 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
TSC2-223ENST00000568566 SMARCA4P51532 1647 aa16.31■□□□□ 0.2
TSC2-223ENST00000568566 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
TSC2-223ENST00000568566 NESP48681 1621 aa16.3■□□□□ 0.2
TSC2-223ENST00000568566 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
TSC2-223ENST00000568566 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
TSC2-223ENST00000568566 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
TSC2-223ENST00000568566 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
TSC2-223ENST00000568566 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
TSC2-223ENST00000568566 LAMC3Q9Y6N6 1575 aa16.11■□□□□ 0.17
TSC2-223ENST00000568566 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
TSC2-223ENST00000568566 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
TSC2-223ENST00000568566 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
TSC2-223ENST00000568566 TRIM41Q8WV44 630 aa15.96■□□□□ 0.15
TSC2-223ENST00000568566 MRC2Q9UBG0 1479 aa15.93■□□□□ 0.14
TSC2-223ENST00000568566 CADPSQ9ULU8 1353 aa15.92■□□□□ 0.14
TSC2-223ENST00000568566 WDR62O43379 1518 aa15.89■□□□□ 0.13
TSC2-223ENST00000568566 WIZO95785 1651 aa15.86■□□□□ 0.13
TSC2-223ENST00000568566 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
TSC2-223ENST00000568566 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
TSC2-223ENST00000568566 CFTRP13569 1480 aa15.7■□□□□ 0.1
TSC2-223ENST00000568566 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
TSC2-223ENST00000568566 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
TSC2-223ENST00000568566 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
TSC2-223ENST00000568566 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
TSC2-223ENST00000568566 RIMBP3CA6NJZ7 1639 aa15.56■□□□□ 0.08
TSC2-223ENST00000568566 RIMBP3BA6NNM3 1639 aa15.56■□□□□ 0.08
TSC2-223ENST00000568566 RIMBP3Q9UFD9 1639 aa15.56■□□□□ 0.08
TSC2-223ENST00000568566 PRDM2Q13029 1718 aa15.55■□□□□ 0.08
TSC2-223ENST00000568566 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
TSC2-223ENST00000568566 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
TSC2-223ENST00000568566 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
TSC2-223ENST00000568566 TOPBP1Q92547 1522 aa15.45■□□□□ 0.06
TSC2-223ENST00000568566 CCDC88BA6NC98 1476 aa15.45■□□□□ 0.06
TSC2-223ENST00000568566 EIF4G3O43432 1585 aaKnown RBP15.44■□□□□ 0.06
TSC2-223ENST00000568566 CHD1O14646 1710 aa15.37■□□□□ 0.05
TSC2-223ENST00000568566 DNMBPQ6XZF7 1577 aa15.37■□□□□ 0.05
TSC2-223ENST00000568566 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
TSC2-223ENST00000568566 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
TSC2-223ENST00000568566 AQRO60306 1485 aaKnown RBP eCLIP15.34■□□□□ 0.053e-7■■■■□ 23
TSC2-223ENST00000568566 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
TSC2-223ENST00000568566 ARAP1Q96P48 1450 aa15.31■□□□□ 0.04
TSC2-223ENST00000568566 FBLN2P98095 1184 aa15.28■□□□□ 0.04
TSC2-223ENST00000568566 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.04
TSC2-223ENST00000568566 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
TSC2-223ENST00000568566 RAD54L2Q9Y4B4 1467 aa15.24■□□□□ 0.03
TSC2-223ENST00000568566 TDRD9Q8NDG6 1382 aaKnown RBP15.2■□□□□ 0.02
TSC2-223ENST00000568566 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
TSC2-223ENST00000568566 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
TSC2-223ENST00000568566 SOGA1O94964 1423 aa15.17■□□□□ 0.02
TSC2-223ENST00000568566 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
TSC2-223ENST00000568566 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
TSC2-223ENST00000568566 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
TSC2-223ENST00000568566 WDR97A6NE52 1622 aa15.13■□□□□ 0.01
TSC2-223ENST00000568566 CHMP7Q8WUX9 453 aaPredicted RBP15.11■□□□□ 0.01
TSC2-223ENST00000568566 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
TSC2-223ENST00000568566 CUX1P39880 1505 aa15.1■□□□□ 0.01
TSC2-223ENST00000568566 GRIN2BQ13224 1484 aa15.08■□□□□ 0.01
TSC2-223ENST00000568566 SYNJ2O15056 1496 aa15.07■□□□□ 0
TSC2-223ENST00000568566 PBRM1Q86U86 1689 aa15.05■□□□□ -0
TSC2-223ENST00000568566 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
TSC2-223ENST00000568566 AEBP2Q6ZN18 517 aaPredicted RBP15□□□□□ -0.01
TSC2-223ENST00000568566 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
TSC2-223ENST00000568566 ABCA10Q8WWZ4 1543 aa14.95□□□□□ -0.02
TSC2-223ENST00000568566 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
TSC2-223ENST00000568566 GRIN2AQ12879 1464 aa14.9□□□□□ -0.02
TSC2-223ENST00000568566 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
TSC2-223ENST00000568566 CEP170Q5SW79 1584 aa14.88□□□□□ -0.03
TSC2-223ENST00000568566 NUP160Q12769 1436 aa14.85□□□□□ -0.03
TSC2-223ENST00000568566 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.03
TSC2-223ENST00000568566 SHROOM2Q13796 1616 aa14.82□□□□□ -0.04
TSC2-223ENST00000568566 FHAD1B1AJZ9 1412 aa14.8□□□□□ -0.04
TSC2-223ENST00000568566 TOP2BQ02880 1626 aa14.78□□□□□ -0.04
TSC2-223ENST00000568566 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
TSC2-223ENST00000568566 KIF13AQ9H1H9 1805 aa14.78□□□□□ -0.04
TSC2-223ENST00000568566 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
TSC2-223ENST00000568566 PRG4Q92954 1404 aaPredicted RBP14.74□□□□□ -0.05
TSC2-223ENST00000568566 RUSC2Q8N2Y8 1516 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms