Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SF3A1-206ENST00000471037 555 ntTSL 37.87□□□□□ -1.151e-8■■□□□ 13.8
PRPF8Q6P2Q9 POLR3H-209ENST00000483837 1829 ntTSL 514.47□□□□□ -0.095e-9■■□□□ 13.8
PRPF8Q6P2Q9 PKMYT1-205ENST00000570649 612 ntTSL 217.65■□□□□ 0.421e-7■■□□□ 13.8
PRPF8Q6P2Q9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.125e-7■■□□□ 13.8
PRPF8Q6P2Q9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.72■□□□□ 0.115e-7■■□□□ 13.8
PRPF8Q6P2Q9 PKMYT1-208ENST00000572619 495 ntTSL 413.63□□□□□ -0.231e-7■■□□□ 13.8
PRPF8Q6P2Q9 PGAP3-207ENST00000580898 556 ntTSL 411.59□□□□□ -0.556e-7■■□□□ 13.8
PRPF8Q6P2Q9 PKMYT1-209ENST00000572658 551 ntTSL 211.01□□□□□ -0.651e-7■■□□□ 13.8
PRPF8Q6P2Q9 PTCD3-207ENST00000467273 757 ntTSL 34.92□□□□□ -1.625e-7■■□□□ 13.8
PRPF8Q6P2Q9 PTCD3-219ENST00000494323 540 ntTSL 44.61□□□□□ -1.675e-7■■□□□ 13.8
PRPF8Q6P2Q9 PTCD3-209ENST00000472044 293 ntTSL 30.15□□□□□ -2.385e-7■■□□□ 13.8
PRPF8Q6P2Q9 MAN2C1-207ENST00000562228 734 ntTSL 310.99□□□□□ -0.654e-9■■□□□ 13.8
PRPF8Q6P2Q9 CLASRP-209ENST00000588016 967 ntTSL 27.63□□□□□ -1.196e-8■■□□□ 13.8
PRPF8Q6P2Q9 HDAC5-211ENST00000592385 2601 ntTSL 511.48□□□□□ -0.571e-6■■□□□ 13.8
PRPF8Q6P2Q9 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.775e-7■■□□□ 13.8
PRPF8Q6P2Q9 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.785e-7■■□□□ 13.8
PRPF8Q6P2Q9 RERE-203ENST00000400907 2973 ntTSL 5 BASIC6.3□□□□□ -1.45e-7■■□□□ 13.8
PRPF8Q6P2Q9 DDX3X-207ENST00000610559 542 ntTSL 46.59□□□□□ -1.362e-11■■□□□ 13.8
PRPF8Q6P2Q9 AC138932.1-201ENST00000534164 6830 ntBASIC14.62□□□□□ -0.077e-8■■□□□ 13.8
PRPF8Q6P2Q9 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.063e-6■■□□□ 13.8
PRPF8Q6P2Q9 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC7.8□□□□□ -1.163e-6■■□□□ 13.8
PRPF8Q6P2Q9 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.233e-6■■□□□ 13.8
PRPF8Q6P2Q9 TRMU-216ENST00000491612 2933 ntTSL 211.25□□□□□ -0.612e-7■■□□□ 13.8
PRPF8Q6P2Q9 TRMU-214ENST00000485559 2653 ntTSL 210.79□□□□□ -0.682e-7■■□□□ 13.8
PRPF8Q6P2Q9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.84■□□□□ 0.612e-8■■□□□ 13.8
PRPF8Q6P2Q9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.28■□□□□ 0.522e-8■■□□□ 13.8
PRPF8Q6P2Q9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.412e-8■■□□□ 13.8
PRPF8Q6P2Q9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.06■□□□□ 0.322e-8■■□□□ 13.8
PRPF8Q6P2Q9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.87□□□□□ -0.032e-8■■□□□ 13.8
PRPF8Q6P2Q9 SMOX-206ENST00000457205 1669 ntTSL 513.76□□□□□ -0.212e-8■■□□□ 13.8
PRPF8Q6P2Q9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.222e-8■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-213ENST00000574701 553 ntTSL 420.36■□□□□ 0.852e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.442e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-204ENST00000570798 593 ntTSL 415.32■□□□□ 0.042e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.96□□□□□ -0.012e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.012e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-212ENST00000573332 773 ntTSL 414.32□□□□□ -0.122e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.56□□□□□ -0.242e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.56□□□□□ -0.242e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.32e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-208ENST00000571627 579 ntTSL 412.45□□□□□ -0.422e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.52e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC9.92□□□□□ -0.822e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.942e-6■■□□□ 13.8
PRPF8Q6P2Q9 LITAF-207ENST00000571459 677 ntTSL 5 BASIC8.6□□□□□ -1.032e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZFP30-208ENST00000588979 583 ntTSL 319.25■□□□□ 0.673e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZFP30-211ENST00000589789 584 ntTSL 315.1■□□□□ 0.013e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZFP30-212ENST00000591444 521 ntTSL 511.25□□□□□ -0.613e-6■■□□□ 13.8
PRPF8Q6P2Q9 ZFP30-203ENST00000477900 549 ntTSL 38.37□□□□□ -1.073e-6■■□□□ 13.8
PRPF8Q6P2Q9 TSPAN17-205ENST00000504168 884 ntTSL 520.53■□□□□ 0.882e-6■■□□□ 13.8
PRPF8Q6P2Q9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.77■□□□□ 0.762e-6■■□□□ 13.8
PRPF8Q6P2Q9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.23■□□□□ 0.192e-6■■□□□ 13.8
PRPF8Q6P2Q9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.11■□□□□ 0.012e-6■■□□□ 13.8
PRPF8Q6P2Q9 TSPAN17-203ENST00000503030 909 ntTSL 314.08□□□□□ -0.162e-6■■□□□ 13.8
PRPF8Q6P2Q9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.43□□□□□ -0.262e-6■■□□□ 13.8
PRPF8Q6P2Q9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.412e-6■■□□□ 13.8
PRPF8Q6P2Q9 TSPAN17-206ENST00000507471 707 ntTSL 312□□□□□ -0.492e-6■■□□□ 13.8
PRPF8Q6P2Q9 TSPAN17-208ENST00000514705 4445 ntTSL 211.09□□□□□ -0.632e-6■■□□□ 13.8
PRPF8Q6P2Q9 CAMSAP3-203ENST00000593434 323 ntTSL 313.38□□□□□ -0.272e-7■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-206ENST00000417348 912 ntTSL 316.29■□□□□ 0.23e-9■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-205ENST00000413622 1030 ntTSL 316.08■□□□□ 0.173e-9■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.26■□□□□ 0.033e-9■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-207ENST00000429040 1141 ntTSL 214.2□□□□□ -0.143e-9■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.273e-9■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.353e-9■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.373e-9■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.423e-9■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.533e-9■■□□□ 13.8
PRPF8Q6P2Q9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.543e-9■■□□□ 13.8
PRPF8Q6P2Q9 RBM28-203ENST00000459726 728 ntTSL 311.63□□□□□ -0.554e-7■■□□□ 13.8
PRPF8Q6P2Q9 RBM23-206ENST00000553738 619 ntTSL 310.52□□□□□ -0.723e-9■■□□□ 13.8
PRPF8Q6P2Q9 RBM23-219ENST00000555722 602 ntTSL 39.28□□□□□ -0.923e-9■■□□□ 13.8
PRPF8Q6P2Q9 RBM23-220ENST00000556186 603 ntTSL 28.79□□□□□ -13e-9■■□□□ 13.8
PRPF8Q6P2Q9 RBM23-229ENST00000557403 826 ntTSL 37.81□□□□□ -1.163e-9■■□□□ 13.8
PRPF8Q6P2Q9 EMC3-205ENST00000497557 580 ntTSL 35.49□□□□□ -1.533e-9■■□□□ 13.8
PRPF8Q6P2Q9 TTC13-207ENST00000519379 526 ntTSL 42.05□□□□□ -2.083e-9■■□□□ 13.8
PRPF8Q6P2Q9 BMI1-206ENST00000490311 693 ntTSL 31.28□□□□□ -2.23e-9■■□□□ 13.8
PRPF8Q6P2Q9 HSF1-202ENST00000527328 2336 ntTSL 212.16□□□□□ -0.462e-6■■□□□ 13.8
PRPF8Q6P2Q9 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.044e-10■■□□□ 13.8
PRPF8Q6P2Q9 PMF1-206ENST00000606952 1275 ntTSL 1 (best)13.5□□□□□ -0.252e-7■■□□□ 13.8
PRPF8Q6P2Q9 EDC4-202ENST00000536072 2375 ntTSL 212.78□□□□□ -0.369e-7■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.69e-11■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.119e-11■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.359e-11■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-205ENST00000572105 1168 ntTSL 511.8□□□□□ -0.529e-11■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-215ENST00000576917 1958 ntTSL 510.58□□□□□ -0.729e-11■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.749e-11■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-214ENST00000576544 1720 ntTSL 510.34□□□□□ -0.759e-11■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.89e-11■■□□□ 13.8
PRPF8Q6P2Q9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.33■□□□□ 0.218e-7■■□□□ 13.8
PRPF8Q6P2Q9 GLG1-212ENST00000567911 599 ntTSL 39□□□□□ -0.978e-7■■□□□ 13.8
PRPF8Q6P2Q9 TMEM63B-207ENST00000527188 478 ntTSL 310.74□□□□□ -0.696e-8■■□□□ 13.8
PRPF8Q6P2Q9 EP400NL-203ENST00000392352 2172 ntTSL 218.37■□□□□ 0.532e-6■■□□□ 13.8
PRPF8Q6P2Q9 EP400NL-205ENST00000443539 1756 ntTSL 217.95■□□□□ 0.462e-6■■□□□ 13.8
PRPF8Q6P2Q9 EP400NL-202ENST00000389560 1726 ntTSL 1 (best)17.87■□□□□ 0.452e-6■■□□□ 13.8
PRPF8Q6P2Q9 TAMM41-202ENST00000411947 1078 ntTSL 214.47□□□□□ -0.093e-6■■□□□ 13.8
PRPF8Q6P2Q9 TAMM41-204ENST00000417723 992 ntTSL 1 (best)9.37□□□□□ -0.913e-6■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-204ENST00000571721 813 ntTSL 516.46■□□□□ 0.231e-10■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-209ENST00000575659 742 ntTSL 314.82□□□□□ -0.041e-10■■□□□ 13.8
PRPF8Q6P2Q9 ACTG1-203ENST00000571691 761 ntTSL 311.57□□□□□ -0.561e-10■■□□□ 13.8
Retrieved 100 of 73,762 protein–RNA pairs in 1610.3 ms