RNA–Protein interactions for RNA: ENST00000570649.1

PKMYT1-205, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 2

Gene PKMYT1, Length 612 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-205ENST00000570649 NISCHQ9Y2I1 1504 aa51.04■■■■■ 5.76
PKMYT1-205ENST00000570649 CCDC180Q9P1Z9 1646 aa45.52■■■■■ 4.88
PKMYT1-205ENST00000570649 ABCC9O60706 1549 aa45.26■■■■■ 4.84
PKMYT1-205ENST00000570649 RB1CC1Q8TDY2 1594 aa43.23■■■■■ 4.51
PKMYT1-205ENST00000570649 DCAF8L2P0C7V8 631 aa43.14■■■■■ 4.5
PKMYT1-205ENST00000570649 NACADO15069 1562 aa43.04■■■■■ 4.48
PKMYT1-205ENST00000570649 MYO15BQ96JP2 1530 aa42.57■■■■■ 4.41
PKMYT1-205ENST00000570649 ZCCHC6Q5VYS8 1495 aaKnown RBP42.35■■■■■ 4.37
PKMYT1-205ENST00000570649 PABPN1Q86U42 306 aaKnown RBP eCLIP42.3■■■■■ 4.36
PKMYT1-205ENST00000570649 DCAF1Q9Y4B6 1507 aa42.17■■■■■ 4.34
PKMYT1-205ENST00000570649 DNAJC5BQ9UF47 199 aa42.14■■■■■ 4.34
PKMYT1-205ENST00000570649 UNC13AQ9UPW8 1703 aa42.08■■■■■ 4.33
PKMYT1-205ENST00000570649 BICRAQ9NZM4 1560 aa41.88■■■■■ 4.29
PKMYT1-205ENST00000570649 SCRIBQ14160 1630 aa41.56■■■■■ 4.24
PKMYT1-205ENST00000570649 SHROOM4Q9ULL8 1493 aa41.42■■■■■ 4.22
PKMYT1-205ENST00000570649 EIF4G1Q04637 1599 aaKnown RBP40.87■■■■■ 4.13
PKMYT1-205ENST00000570649 CC2D2AQ9P2K1 1620 aa40.85■■■■■ 4.13
PKMYT1-205ENST00000570649 CECR2Q9BXF3 1484 aa40.75■■■■■ 4.11
PKMYT1-205ENST00000570649 NCAPD3P42695 1498 aa39.77■■■■□ 3.96
PKMYT1-205ENST00000570649 ATAD2BQ9ULI0 1458 aa39.68■■■■□ 3.94
PKMYT1-205ENST00000570649 SMARCA4P51532 1647 aa39.68■■■■□ 3.94
PKMYT1-205ENST00000570649 BAZ1AQ9NRL2 1556 aaPredicted RBP39.59■■■■□ 3.93
PKMYT1-205ENST00000570649 SMARCA2P51531 1590 aa39.59■■■■□ 3.93
PKMYT1-205ENST00000570649 HMGXB3Q12766 1538 aa39.44■■■■□ 3.9
PKMYT1-205ENST00000570649 BAZ1BQ9UIG0 1483 aaKnown RBP39.34■■■■□ 3.89
PKMYT1-205ENST00000570649 MROH2BQ7Z745 1585 aa39.32■■■■□ 3.88
PKMYT1-205ENST00000570649 PEG3Q9GZU2 1588 aa39.29■■■■□ 3.88
PKMYT1-205ENST00000570649 ERCC6Q03468 1493 aa39.1■■■■□ 3.85
PKMYT1-205ENST00000570649 NESP48681 1621 aa38.96■■■■□ 3.83
PKMYT1-205ENST00000570649 CUX2O14529 1486 aa38.84■■■■□ 3.81
PKMYT1-205ENST00000570649 WIZO95785 1651 aa38.83■■■■□ 3.81
PKMYT1-205ENST00000570649 LAMC3Q9Y6N6 1575 aa38.75■■■■□ 3.79
PKMYT1-205ENST00000570649 RSF1Q96T23 1441 aaPredicted RBP38.71■■■■□ 3.79
PKMYT1-205ENST00000570649 PDS5BQ9NTI5 1447 aa38.63■■■■□ 3.77
PKMYT1-205ENST00000570649 CADPSQ9ULU8 1353 aa38.62■■■■□ 3.77
PKMYT1-205ENST00000570649 DNAJC5Q9H3Z4 198 aa38.45■■■■□ 3.75
PKMYT1-205ENST00000570649 THOC2Q8NI27 1593 aaKnown RBP38.4■■■■□ 3.74
PKMYT1-205ENST00000570649 TOP2AP11388 1531 aaKnown RBP38.39■■■■□ 3.74
PKMYT1-205ENST00000570649 KIF21AQ7Z4S6 1674 aa38.38■■■■□ 3.73
PKMYT1-205ENST00000570649 CFTRP13569 1480 aa38.22■■■■□ 3.71
PKMYT1-205ENST00000570649 MRC2Q9UBG0 1479 aa38.19■■■■□ 3.7
PKMYT1-205ENST00000570649 FANCD2Q9BXW9 1451 aa38.14■■■■□ 3.7
PKMYT1-205ENST00000570649 CEP164Q9UPV0 1460 aa38.13■■■■□ 3.69
PKMYT1-205ENST00000570649 WDR62O43379 1518 aa38.03■■■■□ 3.68
PKMYT1-205ENST00000570649 CCDC88BA6NC98 1476 aa38.02■■■■□ 3.68
PKMYT1-205ENST00000570649 URB2Q14146 1524 aaKnown RBP37.75■■■■□ 3.63
PKMYT1-205ENST00000570649 PRDM2Q13029 1718 aa37.68■■■■□ 3.62
PKMYT1-205ENST00000570649 ABCC8Q09428 1581 aa37.45■■■■□ 3.59
PKMYT1-205ENST00000570649 TOPBP1Q92547 1522 aa37.43■■■■□ 3.58
PKMYT1-205ENST00000570649 SUPT5HO00267 1087 aaKnown RBP37.43■■■■□ 3.58
PKMYT1-205ENST00000570649 IFT140Q96RY7 1462 aa37.37■■■■□ 3.57
PKMYT1-205ENST00000570649 DNMBPQ6XZF7 1577 aa37.3■■■■□ 3.56
PKMYT1-205ENST00000570649 OSCARQ8IYS5 282 aa37.28■■■■□ 3.56
PKMYT1-205ENST00000570649 ZNF608Q9ULD9 1512 aaPredicted RBP37.23■■■■□ 3.55
PKMYT1-205ENST00000570649 POLA1P09884 1462 aaPredicted RBP37.07■■■■□ 3.53
PKMYT1-205ENST00000570649 AQRO60306 1485 aaKnown RBP eCLIP37.01■■■■□ 3.512e-6■□□□□ 8.5
PKMYT1-205ENST00000570649 TARBP1Q13395 1621 aaKnown RBP37■■■■□ 3.51
PKMYT1-205ENST00000570649 SOGA1O94964 1423 aa37■■■■□ 3.51
PKMYT1-205ENST00000570649 EIF4G3O43432 1585 aaKnown RBP36.98■■■■□ 3.51
PKMYT1-205ENST00000570649 TRIM41Q8WV44 630 aa36.97■■■■□ 3.51
PKMYT1-205ENST00000570649 RAD54L2Q9Y4B4 1467 aa36.95■■■■□ 3.51
PKMYT1-205ENST00000570649 CUX1P39880 1505 aa36.91■■■■□ 3.5
PKMYT1-205ENST00000570649 FGD5Q6ZNL6 1462 aa36.9■■■■□ 3.5
PKMYT1-205ENST00000570649 TDRD9Q8NDG6 1382 aaKnown RBP36.87■■■■□ 3.49
PKMYT1-205ENST00000570649 FBLN2P98095 1184 aa36.8■■■■□ 3.48
PKMYT1-205ENST00000570649 WDR97A6NE52 1622 aa36.68■■■■□ 3.46
PKMYT1-205ENST00000570649 SNAPC4Q5SXM2 1469 aa36.6■■■■□ 3.45
PKMYT1-205ENST00000570649 GRIN2BQ13224 1484 aa36.59■■■■□ 3.45
PKMYT1-205ENST00000570649 CHMP7Q8WUX9 453 aaPredicted RBP36.59■■■■□ 3.45
PKMYT1-205ENST00000570649 CHD1O14646 1710 aa36.59■■■■□ 3.45
PKMYT1-205ENST00000570649 RIMBP3CA6NJZ7 1639 aa36.54■■■■□ 3.44
PKMYT1-205ENST00000570649 RIMBP3BA6NNM3 1639 aa36.54■■■■□ 3.44
PKMYT1-205ENST00000570649 RIMBP3Q9UFD9 1639 aa36.54■■■■□ 3.44
PKMYT1-205ENST00000570649 WRNQ14191 1432 aaPredicted RBP eCLIP36.53■■■■□ 3.44
PKMYT1-205ENST00000570649 MAGI1Q96QZ7 1491 aaPredicted RBP36.53■■■■□ 3.44
PKMYT1-205ENST00000570649 GAPVD1Q14C86 1478 aa36.52■■■■□ 3.44
PKMYT1-205ENST00000570649 ARHGEF11O15085 1522 aa36.51■■■■□ 3.44
PKMYT1-205ENST00000570649 ABCA10Q8WWZ4 1543 aa36.51■■■■□ 3.44
PKMYT1-205ENST00000570649 TOP2BQ02880 1626 aa36.42■■■■□ 3.42
PKMYT1-205ENST00000570649 SYNJ2O15056 1496 aa36.41■■■■□ 3.42
PKMYT1-205ENST00000570649 SYNJ1O43426 1573 aa36.37■■■■□ 3.41
PKMYT1-205ENST00000570649 CYB5RLQ6IPT4 315 aa36.37■■■■□ 3.41
PKMYT1-205ENST00000570649 BIVM-ERCC5R4GMW8 1640 aa36.37■■■■□ 3.41
PKMYT1-205ENST00000570649 ABCA5Q8WWZ7 1642 aa36.34■■■■□ 3.41
PKMYT1-205ENST00000570649 PBRM1Q86U86 1689 aa36.32■■■■□ 3.41
PKMYT1-205ENST00000570649 CLASP1Q7Z460 1538 aa36.24■■■■□ 3.39
PKMYT1-205ENST00000570649 ARAP1Q96P48 1450 aa36.17■■■■□ 3.38
PKMYT1-205ENST00000570649 GRIN2AQ12879 1464 aa36.09■■■■□ 3.37
PKMYT1-205ENST00000570649 FHAD1B1AJZ9 1412 aa36.08■■■■□ 3.37
PKMYT1-205ENST00000570649 ERICH3Q5RHP9 1530 aa36.06■■■■□ 3.36
PKMYT1-205ENST00000570649 ADAMTS12P58397 1594 aa36.05■■■■□ 3.36
PKMYT1-205ENST00000570649 NUP160Q12769 1436 aa35.95■■■■□ 3.35
PKMYT1-205ENST00000570649 CEP170Q5SW79 1584 aa35.89■■■■□ 3.34
PKMYT1-205ENST00000570649 TRHP20396 242 aaPredicted RBP35.87■■■■□ 3.33
PKMYT1-205ENST00000570649 KIF27Q86VH2 1401 aa35.83■■■■□ 3.33
PKMYT1-205ENST00000570649 IGF1RP08069 1367 aa35.78■■■■□ 3.32
PKMYT1-205ENST00000570649 JPH4Q96JJ6 628 aa35.72■■■■□ 3.31
PKMYT1-205ENST00000570649 ERCC6L2Q5T890 1561 aa35.7■■■■□ 3.31
PKMYT1-205ENST00000570649 SHROOM2Q13796 1616 aa35.67■■■■□ 3.3
PKMYT1-205ENST00000570649 PRG4Q92954 1404 aaPredicted RBP35.64■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms