RNA–Protein interactions for RNA: ENST00000573283.5

ACTG1-206, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ACTG1, Length 2,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-206ENST00000573283 NISCHQ9Y2I1 1504 aa28.34■■■□□ 2.13
ACTG1-206ENST00000573283 CCDC180Q9P1Z9 1646 aa24.27■■□□□ 1.48
ACTG1-206ENST00000573283 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
ACTG1-206ENST00000573283 ZCCHC6Q5VYS8 1495 aaKnown RBP24.05■■□□□ 1.44
ACTG1-206ENST00000573283 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
ACTG1-206ENST00000573283 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
ACTG1-206ENST00000573283 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
ACTG1-206ENST00000573283 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
ACTG1-206ENST00000573283 ABCC9O60706 1549 aa23.3■■□□□ 1.32
ACTG1-206ENST00000573283 DCAF8L2P0C7V8 631 aa23.21■■□□□ 1.31
ACTG1-206ENST00000573283 HRCP23327 699 aa23.03■■□□□ 1.28
ACTG1-206ENST00000573283 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
ACTG1-206ENST00000573283 NACADO15069 1562 aa22.69■■□□□ 1.22
ACTG1-206ENST00000573283 LOC105371045A0A1W2PR82 267 aa22.59■■□□□ 1.21
ACTG1-206ENST00000573283 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
ACTG1-206ENST00000573283 RSF1Q96T23 1441 aaPredicted RBP22.49■■□□□ 1.19
ACTG1-206ENST00000573283 SCRIBQ14160 1630 aa22.48■■□□□ 1.19
ACTG1-206ENST00000573283 PPARGC1BQ86YN6 1023 aaKnown RBP22.42■■□□□ 1.18
ACTG1-206ENST00000573283 TRIM26Q12899 539 aaPredicted RBP22.38■■□□□ 1.17
ACTG1-206ENST00000573283 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
ACTG1-206ENST00000573283 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
ACTG1-206ENST00000573283 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
ACTG1-206ENST00000573283 ZEB1P37275 1124 aaPredicted RBP22.02■■□□□ 1.12
ACTG1-206ENST00000573283 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
ACTG1-206ENST00000573283 FAM9AQ8IZU1 332 aaPredicted RBP21.96■■□□□ 1.11
ACTG1-206ENST00000573283 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
ACTG1-206ENST00000573283 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
ACTG1-206ENST00000573283 WIZO95785 1651 aa21.92■■□□□ 1.1
ACTG1-206ENST00000573283 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
ACTG1-206ENST00000573283 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
ACTG1-206ENST00000573283 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
ACTG1-206ENST00000573283 TOP2AP11388 1531 aaKnown RBP21.61■■□□□ 1.05
ACTG1-206ENST00000573283 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
ACTG1-206ENST00000573283 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
ACTG1-206ENST00000573283 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
ACTG1-206ENST00000573283 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
ACTG1-206ENST00000573283 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.031e-8■□□□□ 10.4
ACTG1-206ENST00000573283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
ACTG1-206ENST00000573283 CEP162Q5TB80 1403 aa21.35■■□□□ 1.01
ACTG1-206ENST00000573283 CCER1Q8TC90 406 aaPredicted RBP21.34■■□□□ 1.01
ACTG1-206ENST00000573283 EEA1Q15075 1411 aa21.33■■□□□ 1
ACTG1-206ENST00000573283 TNIKQ9UKE5 1360 aa21.33■■□□□ 1
ACTG1-206ENST00000573283 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1
ACTG1-206ENST00000573283 SOGA1O94964 1423 aa21.31■■□□□ 1
ACTG1-206ENST00000573283 PEG3Q9GZU2 1588 aa21.25■□□□□ 0.99
ACTG1-206ENST00000573283 PELP1Q8IZL8 1130 aaKnown RBP21.23■□□□□ 0.99
ACTG1-206ENST00000573283 CSRNP3Q8WYN3 585 aa21.21■□□□□ 0.99
ACTG1-206ENST00000573283 RUSC2Q8N2Y8 1516 aa21.2■□□□□ 0.98
ACTG1-206ENST00000573283 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
ACTG1-206ENST00000573283 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
ACTG1-206ENST00000573283 UBTFP17480 764 aaKnown RBP21.09■□□□□ 0.97
ACTG1-206ENST00000573283 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
ACTG1-206ENST00000573283 ACIN1Q9UKV3 1341 aaKnown RBP21.08■□□□□ 0.97
ACTG1-206ENST00000573283 DIEXFQ68CQ4 756 aaKnown RBP21.07■□□□□ 0.96
ACTG1-206ENST00000573283 KIF21BO75037 1637 aa21.05■□□□□ 0.96
ACTG1-206ENST00000573283 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
ACTG1-206ENST00000573283 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
ACTG1-206ENST00000573283 SYNJ1O43426 1573 aa21.02■□□□□ 0.96
ACTG1-206ENST00000573283 NEUROD1Q13562 356 aa21■□□□□ 0.95
ACTG1-206ENST00000573283 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
ACTG1-206ENST00000573283 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
ACTG1-206ENST00000573283 BAZ1BQ9UIG0 1483 aaKnown RBP20.96■□□□□ 0.95
ACTG1-206ENST00000573283 CENPBP07199 599 aaPredicted RBP20.92■□□□□ 0.94
ACTG1-206ENST00000573283 CLIP1P30622 1438 aa20.9■□□□□ 0.94
ACTG1-206ENST00000573283 ZNF316A6NFI3 1004 aaPredicted RBP20.89■□□□□ 0.93
ACTG1-206ENST00000573283 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
ACTG1-206ENST00000573283 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
ACTG1-206ENST00000573283 RAPGEF2Q9Y4G8 1499 aa20.8■□□□□ 0.92
ACTG1-206ENST00000573283 GTF3C3Q9Y5Q9 886 aa20.8■□□□□ 0.92
ACTG1-206ENST00000573283 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
ACTG1-206ENST00000573283 HNRNPUL2Q1KMD3 747 aaKnown RBP20.75■□□□□ 0.91
ACTG1-206ENST00000573283 BIVM-ERCC5R4GMW8 1640 aa20.72■□□□□ 0.91
ACTG1-206ENST00000573283 APLP2Q06481 763 aa20.69■□□□□ 0.9
ACTG1-206ENST00000573283 ERICH3Q5RHP9 1530 aa20.67■□□□□ 0.9
ACTG1-206ENST00000573283 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
ACTG1-206ENST00000573283 MIER1Q8N108 512 aa20.58■□□□□ 0.88
ACTG1-206ENST00000573283 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
ACTG1-206ENST00000573283 CLSPNQ9HAW4 1339 aa20.55■□□□□ 0.88
ACTG1-206ENST00000573283 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
ACTG1-206ENST00000573283 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
ACTG1-206ENST00000573283 CUX1P39880 1505 aa20.49■□□□□ 0.87
ACTG1-206ENST00000573283 DHX57Q6P158 1386 aaKnown RBP20.49■□□□□ 0.87
ACTG1-206ENST00000573283 CFTRP13569 1480 aa20.47■□□□□ 0.87
ACTG1-206ENST00000573283 RRBP1Q9P2E9 1410 aaKnown RBP20.44■□□□□ 0.86
ACTG1-206ENST00000573283 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
ACTG1-206ENST00000573283 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
ACTG1-206ENST00000573283 KANK4Q5T7N3 995 aaPredicted RBP20.41■□□□□ 0.86
ACTG1-206ENST00000573283 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
ACTG1-206ENST00000573283 CUX2O14529 1486 aa20.39■□□□□ 0.86
ACTG1-206ENST00000573283 NESP48681 1621 aa20.35■□□□□ 0.85
ACTG1-206ENST00000573283 ARHGAP35Q9NRY4 1499 aa20.35■□□□□ 0.85
ACTG1-206ENST00000573283 CCNB3Q8WWL7 1395 aa20.29■□□□□ 0.84
ACTG1-206ENST00000573283 LAMC3Q9Y6N6 1575 aa20.27■□□□□ 0.84
ACTG1-206ENST00000573283 MAP3K1Q13233 1512 aa20.23■□□□□ 0.83
ACTG1-206ENST00000573283 MYT1Q01538 1121 aa20.22■□□□□ 0.83
ACTG1-206ENST00000573283 TIAM1Q13009 1591 aa20.19■□□□□ 0.82
ACTG1-206ENST00000573283 IGF1RP08069 1367 aa20.18■□□□□ 0.82
ACTG1-206ENST00000573283 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
ACTG1-206ENST00000573283 PDS5BQ9NTI5 1447 aa20.16■□□□□ 0.82
ACTG1-206ENST00000573283 MAPKBP1O60336 1514 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms