RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.62
SLC39A1-201ENST00000310483 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
SLC39A1-201ENST00000310483 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
SLC39A1-201ENST00000310483 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
SLC39A1-201ENST00000310483 MYO15BQ96JP2 1530 aa26.52■■□□□ 1.84
SLC39A1-201ENST00000310483 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
SLC39A1-201ENST00000310483 HRCP23327 699 aa26.35■■□□□ 1.81
SLC39A1-201ENST00000310483 CCDC180Q9P1Z9 1646 aa26.34■■□□□ 1.81
SLC39A1-201ENST00000310483 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
SLC39A1-201ENST00000310483 PCGF6Q9BYE7 350 aa26.15■■□□□ 1.78
SLC39A1-201ENST00000310483 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.75
SLC39A1-201ENST00000310483 LOC105371045A0A1W2PR82 267 aa25.79■■□□□ 1.72
SLC39A1-201ENST00000310483 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
SLC39A1-201ENST00000310483 TRIM26Q12899 539 aaPredicted RBP25.38■■□□□ 1.65
SLC39A1-201ENST00000310483 ABCC9O60706 1549 aa25.22■■□□□ 1.63
SLC39A1-201ENST00000310483 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
SLC39A1-201ENST00000310483 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
SLC39A1-201ENST00000310483 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
SLC39A1-201ENST00000310483 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
SLC39A1-201ENST00000310483 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
SLC39A1-201ENST00000310483 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.59
SLC39A1-201ENST00000310483 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
SLC39A1-201ENST00000310483 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
SLC39A1-201ENST00000310483 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
SLC39A1-201ENST00000310483 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
SLC39A1-201ENST00000310483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.51
SLC39A1-201ENST00000310483 WIZO95785 1651 aa24.45■■□□□ 1.5
SLC39A1-201ENST00000310483 PELP1Q8IZL8 1130 aaKnown RBP24.38■■□□□ 1.49
SLC39A1-201ENST00000310483 CCER1Q8TC90 406 aaPredicted RBP24.33■■□□□ 1.48
SLC39A1-201ENST00000310483 NACADO15069 1562 aa24.27■■□□□ 1.48
SLC39A1-201ENST00000310483 TTBK1Q5TCY1 1321 aaPredicted RBP24.25■■□□□ 1.47
SLC39A1-201ENST00000310483 EIF4G1Q04637 1599 aaKnown RBP24.21■■□□□ 1.47
SLC39A1-201ENST00000310483 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.46
SLC39A1-201ENST00000310483 NEUROD1Q13562 356 aa24.2■■□□□ 1.46
SLC39A1-201ENST00000310483 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
SLC39A1-201ENST00000310483 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
SLC39A1-201ENST00000310483 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
SLC39A1-201ENST00000310483 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.45
SLC39A1-201ENST00000310483 CEP162Q5TB80 1403 aa24■■□□□ 1.43
SLC39A1-201ENST00000310483 GTF3C3Q9Y5Q9 886 aa23.99■■□□□ 1.43
SLC39A1-201ENST00000310483 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
SLC39A1-201ENST00000310483 SOGA1O94964 1423 aa23.97■■□□□ 1.43
SLC39A1-201ENST00000310483 TOP2AP11388 1531 aaKnown RBP23.93■■□□□ 1.42
SLC39A1-201ENST00000310483 CENPBP07199 599 aaPredicted RBP23.88■■□□□ 1.41
SLC39A1-201ENST00000310483 RUSC2Q8N2Y8 1516 aa23.87■■□□□ 1.41
SLC39A1-201ENST00000310483 SMARCA2P51531 1590 aa23.87■■□□□ 1.41
SLC39A1-201ENST00000310483 TNIKQ9UKE5 1360 aa23.85■■□□□ 1.41
SLC39A1-201ENST00000310483 UBTFP17480 764 aaKnown RBP23.83■■□□□ 1.41
SLC39A1-201ENST00000310483 SMARCA4P51532 1647 aa23.83■■□□□ 1.4
SLC39A1-201ENST00000310483 CSRNP3Q8WYN3 585 aa23.79■■□□□ 1.4
SLC39A1-201ENST00000310483 ZNF316A6NFI3 1004 aaPredicted RBP23.75■■□□□ 1.39
SLC39A1-201ENST00000310483 YTHDC1Q96MU7 727 aaKnown RBP23.7■■□□□ 1.38
SLC39A1-201ENST00000310483 EEA1Q15075 1411 aa23.65■■□□□ 1.38
SLC39A1-201ENST00000310483 GOLGA3Q08378 1498 aa23.64■■□□□ 1.38
SLC39A1-201ENST00000310483 HNRNPUL2Q1KMD3 747 aaKnown RBP23.64■■□□□ 1.37
SLC39A1-201ENST00000310483 UNC13AQ9UPW8 1703 aa23.63■■□□□ 1.37
SLC39A1-201ENST00000310483 MIER1Q8N108 512 aa23.57■■□□□ 1.36
SLC39A1-201ENST00000310483 PABPN1Q86U42 306 aaKnown RBP eCLIP23.46■■□□□ 1.35
SLC39A1-201ENST00000310483 SYNJ1O43426 1573 aa23.45■■□□□ 1.34
SLC39A1-201ENST00000310483 CLIP1P30622 1438 aa23.44■■□□□ 1.34
SLC39A1-201ENST00000310483 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
SLC39A1-201ENST00000310483 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
SLC39A1-201ENST00000310483 KIF21BO75037 1637 aa23.39■■□□□ 1.33
SLC39A1-201ENST00000310483 VPS8Q8N3P4 1428 aa23.36■■□□□ 1.33
SLC39A1-201ENST00000310483 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.33
SLC39A1-201ENST00000310483 APLP2Q06481 763 aa23.3■■□□□ 1.32
SLC39A1-201ENST00000310483 BICRAQ9NZM4 1560 aa23.28■■□□□ 1.32
SLC39A1-201ENST00000310483 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
SLC39A1-201ENST00000310483 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
SLC39A1-201ENST00000310483 MYT1Q01538 1121 aa23.18■■□□□ 1.3
SLC39A1-201ENST00000310483 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
SLC39A1-201ENST00000310483 DHX57Q6P158 1386 aaKnown RBP23.12■■□□□ 1.29
SLC39A1-201ENST00000310483 KANK4Q5T7N3 995 aaPredicted RBP23.08■■□□□ 1.28
SLC39A1-201ENST00000310483 ARAP1Q96P48 1450 aa23.03■■□□□ 1.28
SLC39A1-201ENST00000310483 TOP2BQ02880 1626 aa23.02■■□□□ 1.28
SLC39A1-201ENST00000310483 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
SLC39A1-201ENST00000310483 SUPT16HQ9Y5B9 1047 aaKnown RBP22.97■■□□□ 1.27
SLC39A1-201ENST00000310483 PRXQ9BXM0 1461 aa22.94■■□□□ 1.26
SLC39A1-201ENST00000310483 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
SLC39A1-201ENST00000310483 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
SLC39A1-201ENST00000310483 ITGAEP38570 1179 aa22.89■■□□□ 1.25
SLC39A1-201ENST00000310483 RRBP1Q9P2E9 1410 aaKnown RBP22.86■■□□□ 1.25
SLC39A1-201ENST00000310483 KCNH8Q96L42 1107 aa22.82■■□□□ 1.24
SLC39A1-201ENST00000310483 CCNB3Q8WWL7 1395 aa22.79■■□□□ 1.24
SLC39A1-201ENST00000310483 CUX1P39880 1505 aa22.78■■□□□ 1.24
SLC39A1-201ENST00000310483 CUX2O14529 1486 aa22.76■■□□□ 1.23
SLC39A1-201ENST00000310483 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
SLC39A1-201ENST00000310483 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
SLC39A1-201ENST00000310483 TSHZ2Q9NRE2 1034 aa22.71■■□□□ 1.23
SLC39A1-201ENST00000310483 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
SLC39A1-201ENST00000310483 MAPKBP1O60336 1514 aa22.67■■□□□ 1.22
SLC39A1-201ENST00000310483 BCANQ96GW7 911 aa22.61■■□□□ 1.21
SLC39A1-201ENST00000310483 SIN3AQ96ST3 1273 aa22.59■■□□□ 1.21
SLC39A1-201ENST00000310483 DDX10Q13206 875 aaKnown RBP22.58■■□□□ 1.2
SLC39A1-201ENST00000310483 WDR97A6NE52 1622 aa22.55■■□□□ 1.2
SLC39A1-201ENST00000310483 TIAM1Q13009 1591 aa22.54■■□□□ 1.2
SLC39A1-201ENST00000310483 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
SLC39A1-201ENST00000310483 HIRIP3Q9BW71 556 aaPredicted RBP22.52■■□□□ 1.2
SLC39A1-201ENST00000310483 NCAPD3P42695 1498 aa22.52■■□□□ 1.19
SLC39A1-201ENST00000310483 PHLDB1Q86UU1 1377 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms