RNA–Protein interactions for RNA: ENST00000269080.6

ABCA8-201, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best) BASIC

Gene ABCA8, Length 5,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-201ENST00000269080 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
ABCA8-201ENST00000269080 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
ABCA8-201ENST00000269080 ERICH6Q7L0X2 663 aa16.94■□□□□ 0.3
ABCA8-201ENST00000269080 MYT1Q01538 1121 aa16.74■□□□□ 0.27
ABCA8-201ENST00000269080 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
ABCA8-201ENST00000269080 NISCHQ9Y2I1 1504 aa16.58■□□□□ 0.25
ABCA8-201ENST00000269080 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
ABCA8-201ENST00000269080 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
ABCA8-201ENST00000269080 CENPBP07199 599 aaPredicted RBP16.26■□□□□ 0.19
ABCA8-201ENST00000269080 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
ABCA8-201ENST00000269080 TTBK1Q5TCY1 1321 aaPredicted RBP16.06■□□□□ 0.16
ABCA8-201ENST00000269080 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
ABCA8-201ENST00000269080 NEFLP07196 543 aa15.98■□□□□ 0.15
ABCA8-201ENST00000269080 APLP2Q06481 763 aa15.95■□□□□ 0.14
ABCA8-201ENST00000269080 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
ABCA8-201ENST00000269080 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
ABCA8-201ENST00000269080 DAXXQ9UER7 740 aaPredicted RBP15.84■□□□□ 0.13
ABCA8-201ENST00000269080 ZEB1P37275 1124 aaPredicted RBP15.7■□□□□ 0.1
ABCA8-201ENST00000269080 RTL5Q5HYW3 569 aaPredicted RBP15.6■□□□□ 0.09
ABCA8-201ENST00000269080 HRCP23327 699 aa15.55■□□□□ 0.08
ABCA8-201ENST00000269080 ZNF316A6NFI3 1004 aaPredicted RBP15.43■□□□□ 0.06
ABCA8-201ENST00000269080 ATP1B4Q9UN42 357 aaPredicted RBP15.42■□□□□ 0.06
ABCA8-201ENST00000269080 RANGAP1P46060 587 aaPredicted RBP15.32■□□□□ 0.04
ABCA8-201ENST00000269080 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
ABCA8-201ENST00000269080 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
ABCA8-201ENST00000269080 MYT1LQ9UL68 1186 aa15.2■□□□□ 0.02
ABCA8-201ENST00000269080 PPARGC1BQ86YN6 1023 aaKnown RBP15.19■□□□□ 0.02
ABCA8-201ENST00000269080 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
ABCA8-201ENST00000269080 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
ABCA8-201ENST00000269080 TRIM26Q12899 539 aaPredicted RBP15.14■□□□□ 0.01
ABCA8-201ENST00000269080 GLIPR1L2Q4G1C9 344 aa15.13■□□□□ 0.01
ABCA8-201ENST00000269080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
ABCA8-201ENST00000269080 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
ABCA8-201ENST00000269080 POLR3GLQ9BT43 218 aa15.06■□□□□ 0
ABCA8-201ENST00000269080 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
ABCA8-201ENST00000269080 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
ABCA8-201ENST00000269080 BCANQ96GW7 911 aa14.9□□□□□ -0.02
ABCA8-201ENST00000269080 ABCC9O60706 1549 aa14.83□□□□□ -0.04
ABCA8-201ENST00000269080 DIEXFQ68CQ4 756 aaKnown RBP14.83□□□□□ -0.04
ABCA8-201ENST00000269080 CDK11AQ9UQ88 783 aaPredicted RBP14.79□□□□□ -0.04
ABCA8-201ENST00000269080 ANP32BQ92688 251 aaKnown RBP14.73□□□□□ -0.05
ABCA8-201ENST00000269080 ACIN1Q9UKV3 1341 aaKnown RBP14.73□□□□□ -0.05
ABCA8-201ENST00000269080 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
ABCA8-201ENST00000269080 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
ABCA8-201ENST00000269080 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
ABCA8-201ENST00000269080 LOC105371045A0A1W2PR82 267 aa14.68□□□□□ -0.06
ABCA8-201ENST00000269080 BCL11AQ9H165 835 aa14.67□□□□□ -0.06
ABCA8-201ENST00000269080 ZBTB47Q9UFB7 747 aaPredicted RBP14.67□□□□□ -0.06
ABCA8-201ENST00000269080 ANP32AP39687 249 aaKnown RBP14.65□□□□□ -0.06
ABCA8-201ENST00000269080 NPM2Q86SE8 214 aaKnown RBP14.62□□□□□ -0.07
ABCA8-201ENST00000269080 ITGAEP38570 1179 aa14.6□□□□□ -0.07
ABCA8-201ENST00000269080 FBLN2P98095 1184 aa14.59□□□□□ -0.07
ABCA8-201ENST00000269080 ARXQ96QS3 562 aa14.52□□□□□ -0.08
ABCA8-201ENST00000269080 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.08
ABCA8-201ENST00000269080 TNNT2P45379 298 aaPredicted RBP14.5□□□□□ -0.09
ABCA8-201ENST00000269080 NBR1Q14596 966 aa14.46□□□□□ -0.09
ABCA8-201ENST00000269080 CANXP27824 592 aaKnown RBP14.46□□□□□ -0.1
ABCA8-201ENST00000269080 HSP90AA1P07900 732 aaKnown RBP14.44□□□□□ -0.1
ABCA8-201ENST00000269080 CDK11BP21127 795 aaKnown RBP14.43□□□□□ -0.1
ABCA8-201ENST00000269080 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
ABCA8-201ENST00000269080 ESF1Q9H501 851 aaKnown RBP14.4□□□□□ -0.1
ABCA8-201ENST00000269080 NPM1P06748 294 aaKnown RBP eCLIP14.37□□□□□ -0.11
ABCA8-201ENST00000269080 NEUROD1Q13562 356 aa14.36□□□□□ -0.11
ABCA8-201ENST00000269080 SLC24A1O60721 1099 aa14.36□□□□□ -0.11
ABCA8-201ENST00000269080 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
ABCA8-201ENST00000269080 FAM50AQ14320 339 aaKnown RBP14.31□□□□□ -0.12
ABCA8-201ENST00000269080 ANP32CO43423 234 aa14.28□□□□□ -0.12
ABCA8-201ENST00000269080 UPF2Q9HAU5 1272 aaKnown RBP14.24□□□□□ -0.13
ABCA8-201ENST00000269080 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.13
ABCA8-201ENST00000269080 NAP1L5Q96NT1 182 aaPredicted RBP14.18□□□□□ -0.14
ABCA8-201ENST00000269080 RTN4Q9NQC3 1192 aaKnown RBP14.18□□□□□ -0.14
ABCA8-201ENST00000269080 ANP32EQ9BTT0 268 aa14.18□□□□□ -0.14
ABCA8-201ENST00000269080 FKBP8Q14318 412 aa14.17□□□□□ -0.14
ABCA8-201ENST00000269080 STAG3Q9UJ98 1225 aa14.13□□□□□ -0.15
ABCA8-201ENST00000269080 NEFMP07197 916 aa14.13□□□□□ -0.15
ABCA8-201ENST00000269080 DNTTIP2Q5QJE6 756 aaKnown RBP14.12□□□□□ -0.15
ABCA8-201ENST00000269080 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
ABCA8-201ENST00000269080 PTMAP06454 111 aaKnown RBP14.06□□□□□ -0.16
ABCA8-201ENST00000269080 ZNF777Q9ULD5 760 aaPredicted RBP14.06□□□□□ -0.16
ABCA8-201ENST00000269080 PLPPR3Q6T4P5 718 aa14.06□□□□□ -0.16
ABCA8-201ENST00000269080 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
ABCA8-201ENST00000269080 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
ABCA8-201ENST00000269080 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
ABCA8-201ENST00000269080 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
ABCA8-201ENST00000269080 P3H3Q8IVL6 736 aa14□□□□□ -0.17
ABCA8-201ENST00000269080 NCLP19338 710 aaKnown RBP13.99□□□□□ -0.17
ABCA8-201ENST00000269080 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
ABCA8-201ENST00000269080 CCDC136Q96JN2 1154 aa13.95□□□□□ -0.18
ABCA8-201ENST00000269080 CHGAP10645 457 aaKnown RBP13.95□□□□□ -0.18
ABCA8-201ENST00000269080 ARID4BQ4LE39 1312 aaPredicted RBP13.93□□□□□ -0.18
ABCA8-201ENST00000269080 TNNT3P45378 269 aaPredicted RBP13.91□□□□□ -0.18
ABCA8-201ENST00000269080 MIER1Q8N108 512 aa13.91□□□□□ -0.18
ABCA8-201ENST00000269080 GOLGA6L22H0YM25 854 aa13.9□□□□□ -0.18
ABCA8-201ENST00000269080 RB1CC1Q8TDY2 1594 aa13.9□□□□□ -0.18
ABCA8-201ENST00000269080 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
ABCA8-201ENST00000269080 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
ABCA8-201ENST00000269080 ZRSR1Q15695 479 aaKnown RBP13.87□□□□□ -0.19
ABCA8-201ENST00000269080 CALRP27797 417 aaKnown RBP13.87□□□□□ -0.19
ABCA8-201ENST00000269080 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.86□□□□□ -0.19
ABCA8-201ENST00000269080 HNRNPUQ00839 825 aaKnown RBP eCLIP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms