RNA–Protein interactions for RNA: ENST00000413622.5

SLC39A1-205, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 1,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-205ENST00000413622 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
SLC39A1-205ENST00000413622 CCDC180Q9P1Z9 1646 aa41.78■■■■■ 4.28
SLC39A1-205ENST00000413622 ABCC9O60706 1549 aa41.08■■■■■ 4.17
SLC39A1-205ENST00000413622 RB1CC1Q8TDY2 1594 aa39.32■■■■□ 3.88
SLC39A1-205ENST00000413622 NACADO15069 1562 aa39.22■■■■□ 3.87
SLC39A1-205ENST00000413622 ZCCHC6Q5VYS8 1495 aaKnown RBP39.03■■■■□ 3.84
SLC39A1-205ENST00000413622 MYO15BQ96JP2 1530 aa38.93■■■■□ 3.82
SLC39A1-205ENST00000413622 DCAF8L2P0C7V8 631 aa38.88■■■■□ 3.81
SLC39A1-205ENST00000413622 UNC13AQ9UPW8 1703 aa38.79■■■■□ 3.8
SLC39A1-205ENST00000413622 DCAF1Q9Y4B6 1507 aa38.7■■■■□ 3.79
SLC39A1-205ENST00000413622 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
SLC39A1-205ENST00000413622 PABPN1Q86U42 306 aaKnown RBP eCLIP38.28■■■■□ 3.72
SLC39A1-205ENST00000413622 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
SLC39A1-205ENST00000413622 DNAJC5BQ9UF47 199 aa38.06■■■■□ 3.68
SLC39A1-205ENST00000413622 SHROOM4Q9ULL8 1493 aa37.67■■■■□ 3.62
SLC39A1-205ENST00000413622 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
SLC39A1-205ENST00000413622 CC2D2AQ9P2K1 1620 aa37.21■■■■□ 3.55
SLC39A1-205ENST00000413622 CECR2Q9BXF3 1484 aa36.88■■■■□ 3.49
SLC39A1-205ENST00000413622 SMARCA4P51532 1647 aa36.45■■■■□ 3.43
SLC39A1-205ENST00000413622 ATAD2BQ9ULI0 1458 aa36.25■■■■□ 3.39
SLC39A1-205ENST00000413622 BAZ1AQ9NRL2 1556 aaPredicted RBP36.23■■■■□ 3.39
SLC39A1-205ENST00000413622 NCAPD3P42695 1498 aa36.22■■■■□ 3.39
SLC39A1-205ENST00000413622 MROH2BQ7Z745 1585 aa36.19■■■■□ 3.38
SLC39A1-205ENST00000413622 SMARCA2P51531 1590 aa36.1■■■■□ 3.37
SLC39A1-205ENST00000413622 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
SLC39A1-205ENST00000413622 HMGXB3Q12766 1538 aa36.07■■■■□ 3.36
SLC39A1-205ENST00000413622 BAZ1BQ9UIG0 1483 aaKnown RBP35.85■■■■□ 3.33
SLC39A1-205ENST00000413622 WIZO95785 1651 aa35.81■■■■□ 3.32
SLC39A1-205ENST00000413622 NESP48681 1621 aa35.6■■■■□ 3.29
SLC39A1-205ENST00000413622 RSF1Q96T23 1441 aaPredicted RBP35.59■■■■□ 3.29
SLC39A1-205ENST00000413622 TOP2AP11388 1531 aaKnown RBP35.31■■■■□ 3.24
SLC39A1-205ENST00000413622 LAMC3Q9Y6N6 1575 aa35.3■■■■□ 3.24
SLC39A1-205ENST00000413622 ERCC6Q03468 1493 aa35.24■■■■□ 3.23
SLC39A1-205ENST00000413622 KIF21AQ7Z4S6 1674 aa35.21■■■■□ 3.23
SLC39A1-205ENST00000413622 THOC2Q8NI27 1593 aaKnown RBP35.16■■■■□ 3.22
SLC39A1-205ENST00000413622 CADPSQ9ULU8 1353 aa35.08■■■■□ 3.21
SLC39A1-205ENST00000413622 CUX2O14529 1486 aa35.03■■■■□ 3.2
SLC39A1-205ENST00000413622 CFTRP13569 1480 aa34.91■■■■□ 3.18
SLC39A1-205ENST00000413622 PDS5BQ9NTI5 1447 aa34.9■■■■□ 3.18
SLC39A1-205ENST00000413622 CCDC88BA6NC98 1476 aa34.89■■■■□ 3.18
SLC39A1-205ENST00000413622 PRDM2Q13029 1718 aa34.77■■■■□ 3.16
SLC39A1-205ENST00000413622 FANCD2Q9BXW9 1451 aa34.74■■■■□ 3.15
SLC39A1-205ENST00000413622 MRC2Q9UBG0 1479 aa34.72■■■■□ 3.15
SLC39A1-205ENST00000413622 WDR62O43379 1518 aa34.71■■■■□ 3.15
SLC39A1-205ENST00000413622 CEP164Q9UPV0 1460 aa34.69■■■■□ 3.14
SLC39A1-205ENST00000413622 URB2Q14146 1524 aaKnown RBP34.55■■■■□ 3.12
SLC39A1-205ENST00000413622 SUPT5HO00267 1087 aaKnown RBP34.27■■■■□ 3.08
SLC39A1-205ENST00000413622 DNAJC5Q9H3Z4 198 aa34.23■■■■□ 3.07
SLC39A1-205ENST00000413622 TOPBP1Q92547 1522 aa34.22■■■■□ 3.07
SLC39A1-205ENST00000413622 DNMBPQ6XZF7 1577 aa34.15■■■■□ 3.06
SLC39A1-205ENST00000413622 ZNF608Q9ULD9 1512 aaPredicted RBP34.02■■■■□ 3.04
SLC39A1-205ENST00000413622 TARBP1Q13395 1621 aaKnown RBP33.98■■■■□ 3.03
SLC39A1-205ENST00000413622 CUX1P39880 1505 aa33.96■■■■□ 3.03
SLC39A1-205ENST00000413622 ABCC8Q09428 1581 aa33.96■■■■□ 3.03
SLC39A1-205ENST00000413622 IFT140Q96RY7 1462 aa33.95■■■■□ 3.02
SLC39A1-205ENST00000413622 POLA1P09884 1462 aaPredicted RBP33.93■■■■□ 3.02
SLC39A1-205ENST00000413622 EIF4G3O43432 1585 aaKnown RBP33.87■■■■□ 3.01
SLC39A1-205ENST00000413622 RAD54L2Q9Y4B4 1467 aa33.8■■■■□ 3
SLC39A1-205ENST00000413622 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
SLC39A1-205ENST00000413622 WDR97A6NE52 1622 aa33.72■■■□□ 2.99
SLC39A1-205ENST00000413622 AQRO60306 1485 aaKnown RBP eCLIP33.69■■■□□ 2.982e-6■■■■■ 26.9
SLC39A1-205ENST00000413622 SOGA1O94964 1423 aa33.62■■■□□ 2.97
SLC39A1-205ENST00000413622 SYNJ1O43426 1573 aa33.62■■■□□ 2.97
SLC39A1-205ENST00000413622 BIVM-ERCC5R4GMW8 1640 aa33.6■■■□□ 2.97
SLC39A1-205ENST00000413622 TDRD9Q8NDG6 1382 aaKnown RBP33.54■■■□□ 2.96
SLC39A1-205ENST00000413622 CHD1O14646 1710 aa33.53■■■□□ 2.96
SLC39A1-205ENST00000413622 TOP2BQ02880 1626 aa33.53■■■□□ 2.96
SLC39A1-205ENST00000413622 WRNQ14191 1432 aaPredicted RBP eCLIP33.45■■■□□ 2.95
SLC39A1-205ENST00000413622 ABCA5Q8WWZ7 1642 aa33.45■■■□□ 2.95
SLC39A1-205ENST00000413622 ABCA10Q8WWZ4 1543 aa33.42■■■□□ 2.94
SLC39A1-205ENST00000413622 PBRM1Q86U86 1689 aa33.42■■■□□ 2.94
SLC39A1-205ENST00000413622 SNAPC4Q5SXM2 1469 aa33.38■■■□□ 2.93
SLC39A1-205ENST00000413622 OSCARQ8IYS5 282 aa33.36■■■□□ 2.93
SLC39A1-205ENST00000413622 GRIN2BQ13224 1484 aa33.29■■■□□ 2.92
SLC39A1-205ENST00000413622 GAPVD1Q14C86 1478 aa33.28■■■□□ 2.92
SLC39A1-205ENST00000413622 MAGI1Q96QZ7 1491 aaPredicted RBP33.24■■■□□ 2.91
SLC39A1-205ENST00000413622 RIMBP3CA6NJZ7 1639 aa33.21■■■□□ 2.91
SLC39A1-205ENST00000413622 RIMBP3BA6NNM3 1639 aa33.21■■■□□ 2.91
SLC39A1-205ENST00000413622 RIMBP3Q9UFD9 1639 aa33.21■■■□□ 2.91
SLC39A1-205ENST00000413622 CLASP1Q7Z460 1538 aa33.14■■■□□ 2.9
SLC39A1-205ENST00000413622 SYNJ2O15056 1496 aa33.13■■■□□ 2.89
SLC39A1-205ENST00000413622 ADAMTS12P58397 1594 aa33.12■■■□□ 2.89
SLC39A1-205ENST00000413622 ARHGEF11O15085 1522 aa33.11■■■□□ 2.89
SLC39A1-205ENST00000413622 FBLN2P98095 1184 aa33.06■■■□□ 2.88
SLC39A1-205ENST00000413622 ERICH3Q5RHP9 1530 aa32.98■■■□□ 2.87
SLC39A1-205ENST00000413622 GRIN2AQ12879 1464 aa32.93■■■□□ 2.86
SLC39A1-205ENST00000413622 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
SLC39A1-205ENST00000413622 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
SLC39A1-205ENST00000413622 TRIM41Q8WV44 630 aa32.92■■■□□ 2.86
SLC39A1-205ENST00000413622 ARAP1Q96P48 1450 aa32.9■■■□□ 2.86
SLC39A1-205ENST00000413622 FHAD1B1AJZ9 1412 aa32.85■■■□□ 2.85
SLC39A1-205ENST00000413622 NUP160Q12769 1436 aa32.84■■■□□ 2.85
SLC39A1-205ENST00000413622 ERCC6L2Q5T890 1561 aa32.77■■■□□ 2.84
SLC39A1-205ENST00000413622 SHROOM2Q13796 1616 aa32.72■■■□□ 2.83
SLC39A1-205ENST00000413622 IGF1RP08069 1367 aa32.7■■■□□ 2.83
SLC39A1-205ENST00000413622 KIF27Q86VH2 1401 aa32.68■■■□□ 2.82
SLC39A1-205ENST00000413622 RUSC2Q8N2Y8 1516 aa32.66■■■□□ 2.82
SLC39A1-205ENST00000413622 CUL7Q14999 1698 aa32.66■■■□□ 2.82
SLC39A1-205ENST00000413622 CYB5RLQ6IPT4 315 aa32.61■■■□□ 2.81
SLC39A1-205ENST00000413622 CARMIL1Q5VZK9 1371 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms