RNA–Protein interactions for RNA: ENST00000331925.6

ACTG1-201, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-201ENST00000331925 NISCHQ9Y2I1 1504 aa44.97■■■■■ 4.79
ACTG1-201ENST00000331925 CCDC180Q9P1Z9 1646 aa39.63■■■■□ 3.93
ACTG1-201ENST00000331925 ABCC9O60706 1549 aa38.74■■■■□ 3.79
ACTG1-201ENST00000331925 DCAF8L2P0C7V8 631 aa37.62■■■■□ 3.61
ACTG1-201ENST00000331925 ZCCHC6Q5VYS8 1495 aaKnown RBP37.51■■■■□ 3.59
ACTG1-201ENST00000331925 NACADO15069 1562 aa37.23■■■■□ 3.55
ACTG1-201ENST00000331925 RB1CC1Q8TDY2 1594 aa37.18■■■■□ 3.54
ACTG1-201ENST00000331925 DCAF1Q9Y4B6 1507 aa37.07■■■■□ 3.53
ACTG1-201ENST00000331925 MYO15BQ96JP2 1530 aa37.07■■■■□ 3.52
ACTG1-201ENST00000331925 UNC13AQ9UPW8 1703 aa36.53■■■■□ 3.44
ACTG1-201ENST00000331925 SCRIBQ14160 1630 aa36.41■■■■□ 3.42
ACTG1-201ENST00000331925 PABPN1Q86U42 306 aaKnown RBP eCLIP36.38■■■■□ 3.41
ACTG1-201ENST00000331925 BICRAQ9NZM4 1560 aa36.25■■■■□ 3.39
ACTG1-201ENST00000331925 SHROOM4Q9ULL8 1493 aa35.96■■■■□ 3.35
ACTG1-201ENST00000331925 DNAJC5BQ9UF47 199 aa35.47■■■■□ 3.27
ACTG1-201ENST00000331925 EIF4G1Q04637 1599 aaKnown RBP35.19■■■■□ 3.22
ACTG1-201ENST00000331925 CECR2Q9BXF3 1484 aa35.16■■■■□ 3.22
ACTG1-201ENST00000331925 CC2D2AQ9P2K1 1620 aa34.99■■■■□ 3.19
ACTG1-201ENST00000331925 SMARCA4P51532 1647 aa34.79■■■■□ 3.16
ACTG1-201ENST00000331925 MROH2BQ7Z745 1585 aa34.76■■■■□ 3.16
ACTG1-201ENST00000331925 BAZ1AQ9NRL2 1556 aaPredicted RBP34.73■■■■□ 3.15
ACTG1-201ENST00000331925 ATAD2BQ9ULI0 1458 aa34.56■■■■□ 3.12
ACTG1-201ENST00000331925 RSF1Q96T23 1441 aaPredicted RBP34.47■■■■□ 3.11
ACTG1-201ENST00000331925 NCAPD3P42695 1498 aa34.44■■■■□ 3.1
ACTG1-201ENST00000331925 WIZO95785 1651 aa34.4■■■■□ 3.1
ACTG1-201ENST00000331925 PEG3Q9GZU2 1588 aa34.39■■■■□ 3.1
ACTG1-201ENST00000331925 SMARCA2P51531 1590 aa34.39■■■■□ 3.1
ACTG1-201ENST00000331925 BAZ1BQ9UIG0 1483 aaKnown RBP34.23■■■■□ 3.07
ACTG1-201ENST00000331925 HMGXB3Q12766 1538 aa34.21■■■■□ 3.07
ACTG1-201ENST00000331925 SUPT5HO00267 1087 aaKnown RBP33.98■■■■□ 3.03
ACTG1-201ENST00000331925 TOP2AP11388 1531 aaKnown RBP33.9■■■■□ 3.02
ACTG1-201ENST00000331925 NESP48681 1621 aa33.69■■■□□ 2.98
ACTG1-201ENST00000331925 CCDC88BA6NC98 1476 aa33.64■■■□□ 2.98
ACTG1-201ENST00000331925 CADPSQ9ULU8 1353 aa33.49■■■□□ 2.95
ACTG1-201ENST00000331925 LAMC3Q9Y6N6 1575 aa33.39■■■□□ 2.94
ACTG1-201ENST00000331925 CFTRP13569 1480 aa33.35■■■□□ 2.93
ACTG1-201ENST00000331925 ERCC6Q03468 1493 aa33.21■■■□□ 2.91
ACTG1-201ENST00000331925 KIF21AQ7Z4S6 1674 aa33.17■■■□□ 2.9
ACTG1-201ENST00000331925 PDS5BQ9NTI5 1447 aa33.17■■■□□ 2.9
ACTG1-201ENST00000331925 FANCD2Q9BXW9 1451 aa33.1■■■□□ 2.89
ACTG1-201ENST00000331925 PRDM2Q13029 1718 aa32.98■■■□□ 2.87
ACTG1-201ENST00000331925 CEP164Q9UPV0 1460 aa32.96■■■□□ 2.87
ACTG1-201ENST00000331925 THOC2Q8NI27 1593 aaKnown RBP32.93■■■□□ 2.86
ACTG1-201ENST00000331925 MRC2Q9UBG0 1479 aa32.83■■■□□ 2.85
ACTG1-201ENST00000331925 URB2Q14146 1524 aaKnown RBP32.81■■■□□ 2.84
ACTG1-201ENST00000331925 WDR62O43379 1518 aa32.73■■■□□ 2.83
ACTG1-201ENST00000331925 CUX2O14529 1486 aa32.66■■■□□ 2.82
ACTG1-201ENST00000331925 TOPBP1Q92547 1522 aa32.62■■■□□ 2.81
ACTG1-201ENST00000331925 ABCC8Q09428 1581 aa32.57■■■□□ 2.81
ACTG1-201ENST00000331925 CUX1P39880 1505 aa32.55■■■□□ 2.8
ACTG1-201ENST00000331925 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
ACTG1-201ENST00000331925 WRNQ14191 1432 aaPredicted RBP eCLIP32.41■■■□□ 2.781e-8■□□□□ 10.4
ACTG1-201ENST00000331925 POLA1P09884 1462 aaPredicted RBP32.39■■■□□ 2.78
ACTG1-201ENST00000331925 SYNJ1O43426 1573 aa32.39■■■□□ 2.77
ACTG1-201ENST00000331925 FGD5Q6ZNL6 1462 aa32.35■■■□□ 2.77
ACTG1-201ENST00000331925 RAD54L2Q9Y4B4 1467 aa32.34■■■□□ 2.77
ACTG1-201ENST00000331925 ZNF608Q9ULD9 1512 aaPredicted RBP32.27■■■□□ 2.76
ACTG1-201ENST00000331925 TOP2BQ02880 1626 aa32.27■■■□□ 2.76
ACTG1-201ENST00000331925 SOGA1O94964 1423 aa32.25■■■□□ 2.75
ACTG1-201ENST00000331925 TARBP1Q13395 1621 aaKnown RBP32.25■■■□□ 2.75
ACTG1-201ENST00000331925 BIVM-ERCC5R4GMW8 1640 aa32.24■■■□□ 2.75
ACTG1-201ENST00000331925 IFT140Q96RY7 1462 aa32.23■■■□□ 2.75
ACTG1-201ENST00000331925 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
ACTG1-201ENST00000331925 AQRO60306 1485 aaKnown RBP eCLIP32.13■■■□□ 2.734e-13■■■■■ 34.6
ACTG1-201ENST00000331925 EIF4G3O43432 1585 aaKnown RBP32.01■■■□□ 2.72
ACTG1-201ENST00000331925 WDR97A6NE52 1622 aa32■■■□□ 2.71
ACTG1-201ENST00000331925 ABCA10Q8WWZ4 1543 aa32■■■□□ 2.71
ACTG1-201ENST00000331925 TRIM41Q8WV44 630 aa31.94■■■□□ 2.7
ACTG1-201ENST00000331925 CHIC1Q5VXU3 224 aa31.9■■■□□ 2.7
ACTG1-201ENST00000331925 GAPVD1Q14C86 1478 aa31.85■■■□□ 2.69
ACTG1-201ENST00000331925 ABCA5Q8WWZ7 1642 aa31.85■■■□□ 2.69
ACTG1-201ENST00000331925 RUSC2Q8N2Y8 1516 aa31.75■■■□□ 2.67
ACTG1-201ENST00000331925 GRIN2BQ13224 1484 aa31.75■■■□□ 2.67
ACTG1-201ENST00000331925 SNAPC4Q5SXM2 1469 aa31.74■■■□□ 2.67
ACTG1-201ENST00000331925 PBRM1Q86U86 1689 aa31.72■■■□□ 2.67
ACTG1-201ENST00000331925 FBLN2P98095 1184 aa31.66■■■□□ 2.66
ACTG1-201ENST00000331925 KIF27Q86VH2 1401 aa31.65■■■□□ 2.66
ACTG1-201ENST00000331925 IGF1RP08069 1367 aa31.63■■■□□ 2.65
ACTG1-201ENST00000331925 MAGI1Q96QZ7 1491 aaPredicted RBP31.6■■■□□ 2.65
ACTG1-201ENST00000331925 ERICH3Q5RHP9 1530 aa31.57■■■□□ 2.64
ACTG1-201ENST00000331925 CHD1O14646 1710 aa31.56■■■□□ 2.64
ACTG1-201ENST00000331925 CHMP7Q8WUX9 453 aaPredicted RBP31.54■■■□□ 2.64
ACTG1-201ENST00000331925 OSCARQ8IYS5 282 aa31.52■■■□□ 2.64
ACTG1-201ENST00000331925 SYNJ2O15056 1496 aa31.51■■■□□ 2.64
ACTG1-201ENST00000331925 ADAMTS12P58397 1594 aa31.49■■■□□ 2.63
ACTG1-201ENST00000331925 DNAJC5Q9H3Z4 198 aa31.46■■■□□ 2.63
ACTG1-201ENST00000331925 FHAD1B1AJZ9 1412 aa31.46■■■□□ 2.63
ACTG1-201ENST00000331925 FAM9AQ8IZU1 332 aaPredicted RBP31.44■■■□□ 2.62
ACTG1-201ENST00000331925 CARMIL1Q5VZK9 1371 aa31.39■■■□□ 2.61
ACTG1-201ENST00000331925 GRIN2AQ12879 1464 aa31.38■■■□□ 2.61
ACTG1-201ENST00000331925 CSRNP3Q8WYN3 585 aa31.3■■■□□ 2.6
ACTG1-201ENST00000331925 CUL7Q14999 1698 aa31.3■■■□□ 2.6
ACTG1-201ENST00000331925 CEP170Q5SW79 1584 aa31.27■■■□□ 2.6
ACTG1-201ENST00000331925 NUP160Q12769 1436 aa31.23■■■□□ 2.59
ACTG1-201ENST00000331925 PRXQ9BXM0 1461 aa31.21■■■□□ 2.59
ACTG1-201ENST00000331925 CLASP1Q7Z460 1538 aa31.2■■■□□ 2.59
ACTG1-201ENST00000331925 RAPGEF2Q9Y4G8 1499 aa31.18■■■□□ 2.58
ACTG1-201ENST00000331925 EEA1Q15075 1411 aa31.17■■■□□ 2.58
ACTG1-201ENST00000331925 EHMT2Q96KQ7 1210 aa31.12■■■□□ 2.57
ACTG1-201ENST00000331925 JPH4Q96JJ6 628 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms