RNA–Protein interactions for RNA: ENST00000519379.1

TTC13-207, Transcript of tetratricopeptide repeat domain 13, humanhuman

TSL 4

Gene TTC13, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-207ENST00000519379 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
TTC13-207ENST00000519379 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
TTC13-207ENST00000519379 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
TTC13-207ENST00000519379 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
TTC13-207ENST00000519379 FOXD1Q16676 465 aa18.14■□□□□ 0.49
TTC13-207ENST00000519379 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
TTC13-207ENST00000519379 MSH5O43196 834 aa17.07■□□□□ 0.32
TTC13-207ENST00000519379 PIAS4Q8N2W9 510 aaPredicted RBP16.84■□□□□ 0.29
TTC13-207ENST00000519379 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
TTC13-207ENST00000519379 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
TTC13-207ENST00000519379 ADRA2BP18089 450 aa16.58■□□□□ 0.24
TTC13-207ENST00000519379 MAPK8IP2Q13387 824 aaPredicted RBP15.38■□□□□ 0.05
TTC13-207ENST00000519379 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
TTC13-207ENST00000519379 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
TTC13-207ENST00000519379 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
TTC13-207ENST00000519379 DCAF8L1A6NGE4 600 aa14.75□□□□□ -0.05
TTC13-207ENST00000519379 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
TTC13-207ENST00000519379 HOXD11P31277 338 aaPredicted RBP14.53□□□□□ -0.08
TTC13-207ENST00000519379 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
TTC13-207ENST00000519379 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
TTC13-207ENST00000519379 RNF216Q9NWF9 866 aaPredicted RBP14.3□□□□□ -0.12
TTC13-207ENST00000519379 C1QBPQ07021 282 aaKnown RBP14.28□□□□□ -0.12
TTC13-207ENST00000519379 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
TTC13-207ENST00000519379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.19
TTC13-207ENST00000519379 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
TTC13-207ENST00000519379 NPM3O75607 178 aaKnown RBP13.65□□□□□ -0.22
TTC13-207ENST00000519379 POTEHQ6S545 545 aa13.61□□□□□ -0.23
TTC13-207ENST00000519379 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
TTC13-207ENST00000519379 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
TTC13-207ENST00000519379 CAPN15O75808 1086 aa13.5□□□□□ -0.25
TTC13-207ENST00000519379 DSG3P32926 999 aa13.5□□□□□ -0.25
TTC13-207ENST00000519379 ABCB7O75027 752 aa13.19□□□□□ -0.3
TTC13-207ENST00000519379 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
TTC13-207ENST00000519379 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
TTC13-207ENST00000519379 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
TTC13-207ENST00000519379 KCNA4P22459 653 aa13.02□□□□□ -0.33
TTC13-207ENST00000519379 APLP2Q06481 763 aa13.01□□□□□ -0.33
TTC13-207ENST00000519379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
TTC13-207ENST00000519379 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
TTC13-207ENST00000519379 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
TTC13-207ENST00000519379 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
TTC13-207ENST00000519379 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
TTC13-207ENST00000519379 POLA2Q14181 598 aa12.71□□□□□ -0.37
TTC13-207ENST00000519379 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
TTC13-207ENST00000519379 SP7Q8TDD2 431 aaPredicted RBP12.54□□□□□ -0.4
TTC13-207ENST00000519379 AKT1S1Q96B36 256 aa12.46□□□□□ -0.41
TTC13-207ENST00000519379 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
TTC13-207ENST00000519379 PIP4P2Q8N4L2 257 aa12.41□□□□□ -0.42
TTC13-207ENST00000519379 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
TTC13-207ENST00000519379 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
TTC13-207ENST00000519379 ZBTB12Q9Y330 459 aaPredicted RBP12.33□□□□□ -0.44
TTC13-207ENST00000519379 HAX1O00165 279 aa12.3□□□□□ -0.44
TTC13-207ENST00000519379 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
TTC13-207ENST00000519379 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
TTC13-207ENST00000519379 FXR2P51116 673 aaKnown RBP eCLIP12.23□□□□□ -0.45
TTC13-207ENST00000519379 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
TTC13-207ENST00000519379 EVX2Q03828 476 aa12.16□□□□□ -0.46
TTC13-207ENST00000519379 ZBTB22O15209 634 aa11.99□□□□□ -0.49
TTC13-207ENST00000519379 PRKAR2AP13861 404 aaKnown RBP11.95□□□□□ -0.5
TTC13-207ENST00000519379 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
TTC13-207ENST00000519379 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
TTC13-207ENST00000519379 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
TTC13-207ENST00000519379 CLEC11AQ9Y240 323 aa11.92□□□□□ -0.5
TTC13-207ENST00000519379 FBLN2P98095 1184 aa11.88□□□□□ -0.51
TTC13-207ENST00000519379 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
TTC13-207ENST00000519379 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
TTC13-207ENST00000519379 ATXN8OSP0DMR3 200 aa11.84□□□□□ -0.51
TTC13-207ENST00000519379 GABBR2O75899 941 aa11.81□□□□□ -0.52
TTC13-207ENST00000519379 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
TTC13-207ENST00000519379 CHADLQ6NUI6 762 aa11.77□□□□□ -0.53
TTC13-207ENST00000519379 LHX8Q68G74 356 aa11.76□□□□□ -0.53
TTC13-207ENST00000519379 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
TTC13-207ENST00000519379 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
TTC13-207ENST00000519379 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
TTC13-207ENST00000519379 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
TTC13-207ENST00000519379 POTEIP0CG38 1075 aa11.59□□□□□ -0.55
TTC13-207ENST00000519379 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
TTC13-207ENST00000519379 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
TTC13-207ENST00000519379 PLSCR2Q9NRY7 297 aa11.43□□□□□ -0.58
TTC13-207ENST00000519379 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
TTC13-207ENST00000519379 CLCN6P51797 869 aa11.34□□□□□ -0.59
TTC13-207ENST00000519379 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
TTC13-207ENST00000519379 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
TTC13-207ENST00000519379 GALR2O43603 387 aaPredicted RBP11.27□□□□□ -0.61
TTC13-207ENST00000519379 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
TTC13-207ENST00000519379 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
TTC13-207ENST00000519379 POTEB2H3BUK9 544 aa11.21□□□□□ -0.61
TTC13-207ENST00000519379 PHF12Q96QT6 1004 aa11.17□□□□□ -0.62
TTC13-207ENST00000519379 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
TTC13-207ENST00000519379 POTEMA6NI47 508 aa11.11□□□□□ -0.63
TTC13-207ENST00000519379 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
TTC13-207ENST00000519379 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
TTC13-207ENST00000519379 PAK3O75914 559 aaPredicted RBP11.08□□□□□ -0.64
TTC13-207ENST00000519379 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
TTC13-207ENST00000519379 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
TTC13-207ENST00000519379 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
TTC13-207ENST00000519379 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
TTC13-207ENST00000519379 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
TTC13-207ENST00000519379 MS4A3Q96HJ5 214 aa10.98□□□□□ -0.65
TTC13-207ENST00000519379 METRNQ9UJH8 293 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms