RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 NISCHQ9Y2I1 1504 aa35.14■■■■□ 3.22
TSPAN17-206ENST00000507471 ABCC9O60706 1549 aa31.82■■■□□ 2.68
TSPAN17-206ENST00000507471 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
TSPAN17-206ENST00000507471 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.43
TSPAN17-206ENST00000507471 DNAJC5BQ9UF47 199 aa30.01■■■□□ 2.39
TSPAN17-206ENST00000507471 NACADO15069 1562 aa29.94■■■□□ 2.38
TSPAN17-206ENST00000507471 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
TSPAN17-206ENST00000507471 UNC13AQ9UPW8 1703 aa29.57■■■□□ 2.32
TSPAN17-206ENST00000507471 PABPN1Q86U42 306 aaKnown RBP eCLIP29.56■■■□□ 2.32
TSPAN17-206ENST00000507471 MYO15BQ96JP2 1530 aa29.47■■■□□ 2.31
TSPAN17-206ENST00000507471 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
TSPAN17-206ENST00000507471 ZCCHC6Q5VYS8 1495 aaKnown RBP29.1■■■□□ 2.25
TSPAN17-206ENST00000507471 DCAF1Q9Y4B6 1507 aa29.02■■■□□ 2.24
TSPAN17-206ENST00000507471 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
TSPAN17-206ENST00000507471 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
TSPAN17-206ENST00000507471 CC2D2AQ9P2K1 1620 aa28.75■■■□□ 2.19
TSPAN17-206ENST00000507471 CECR2Q9BXF3 1484 aa28.67■■■□□ 2.18
TSPAN17-206ENST00000507471 EIF4G1Q04637 1599 aaKnown RBP28.64■■■□□ 2.18
TSPAN17-206ENST00000507471 DNAJC5Q9H3Z4 198 aa27.69■■■□□ 2.02
TSPAN17-206ENST00000507471 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
TSPAN17-206ENST00000507471 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
TSPAN17-206ENST00000507471 CUX2O14529 1486 aa27.51■■□□□ 1.99
TSPAN17-206ENST00000507471 ERCC6Q03468 1493 aa27.47■■□□□ 1.99
TSPAN17-206ENST00000507471 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
TSPAN17-206ENST00000507471 SMARCA2P51531 1590 aa27.44■■□□□ 1.98
TSPAN17-206ENST00000507471 HMGXB3Q12766 1538 aa27.44■■□□□ 1.98
TSPAN17-206ENST00000507471 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
TSPAN17-206ENST00000507471 NESP48681 1621 aa27.29■■□□□ 1.96
TSPAN17-206ENST00000507471 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
TSPAN17-206ENST00000507471 PEG3Q9GZU2 1588 aa27.21■■□□□ 1.95
TSPAN17-206ENST00000507471 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
TSPAN17-206ENST00000507471 THOC2Q8NI27 1593 aaKnown RBP27.08■■□□□ 1.93
TSPAN17-206ENST00000507471 LAMC3Q9Y6N6 1575 aa27.07■■□□□ 1.92
TSPAN17-206ENST00000507471 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
TSPAN17-206ENST00000507471 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
TSPAN17-206ENST00000507471 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
TSPAN17-206ENST00000507471 WIZO95785 1651 aa26.76■■□□□ 1.87
TSPAN17-206ENST00000507471 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
TSPAN17-206ENST00000507471 WDR62O43379 1518 aa26.64■■□□□ 1.85
TSPAN17-206ENST00000507471 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
TSPAN17-206ENST00000507471 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
TSPAN17-206ENST00000507471 CFTRP13569 1480 aa26.45■■□□□ 1.82
TSPAN17-206ENST00000507471 RSF1Q96T23 1441 aaPredicted RBP26.43■■□□□ 1.82
TSPAN17-206ENST00000507471 TOP2AP11388 1531 aaKnown RBP26.4■■□□□ 1.82
TSPAN17-206ENST00000507471 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
TSPAN17-206ENST00000507471 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
TSPAN17-206ENST00000507471 PRDM2Q13029 1718 aa26.2■■□□□ 1.79
TSPAN17-206ENST00000507471 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
TSPAN17-206ENST00000507471 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
TSPAN17-206ENST00000507471 IFT140Q96RY7 1462 aa26.01■■□□□ 1.75
TSPAN17-206ENST00000507471 ZNF608Q9ULD9 1512 aaPredicted RBP26.01■■□□□ 1.75
TSPAN17-206ENST00000507471 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
TSPAN17-206ENST00000507471 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
TSPAN17-206ENST00000507471 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
TSPAN17-206ENST00000507471 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
TSPAN17-206ENST00000507471 EIF4G3O43432 1585 aaKnown RBP25.88■■□□□ 1.73
TSPAN17-206ENST00000507471 ABCC8Q09428 1581 aa25.88■■□□□ 1.73
TSPAN17-206ENST00000507471 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
TSPAN17-206ENST00000507471 ARHGEF11O15085 1522 aa25.81■■□□□ 1.72
TSPAN17-206ENST00000507471 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
TSPAN17-206ENST00000507471 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.71
TSPAN17-206ENST00000507471 CHD1O14646 1710 aa25.72■■□□□ 1.71
TSPAN17-206ENST00000507471 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
TSPAN17-206ENST00000507471 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
TSPAN17-206ENST00000507471 CYB5RLQ6IPT4 315 aa25.58■■□□□ 1.69
TSPAN17-206ENST00000507471 FBLN2P98095 1184 aa25.57■■□□□ 1.68
TSPAN17-206ENST00000507471 SOGA1O94964 1423 aa25.55■■□□□ 1.68
TSPAN17-206ENST00000507471 ARAP1Q96P48 1450 aa25.54■■□□□ 1.68
TSPAN17-206ENST00000507471 TDRD9Q8NDG6 1382 aaKnown RBP25.54■■□□□ 1.68
TSPAN17-206ENST00000507471 FGD5Q6ZNL6 1462 aa25.51■■□□□ 1.67
TSPAN17-206ENST00000507471 WDR97A6NE52 1622 aa25.49■■□□□ 1.67
TSPAN17-206ENST00000507471 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
TSPAN17-206ENST00000507471 CUX1P39880 1505 aa25.46■■□□□ 1.67
TSPAN17-206ENST00000507471 CLASP1Q7Z460 1538 aa25.42■■□□□ 1.66
TSPAN17-206ENST00000507471 MAGI1Q96QZ7 1491 aaPredicted RBP25.39■■□□□ 1.65
TSPAN17-206ENST00000507471 SYNJ1O43426 1573 aa25.36■■□□□ 1.65
TSPAN17-206ENST00000507471 GRIN2BQ13224 1484 aa25.36■■□□□ 1.65
TSPAN17-206ENST00000507471 TRHP20396 242 aaPredicted RBP25.36■■□□□ 1.65
TSPAN17-206ENST00000507471 CHMP7Q8WUX9 453 aaPredicted RBP25.35■■□□□ 1.65
TSPAN17-206ENST00000507471 SYNJ2O15056 1496 aa25.31■■□□□ 1.64
TSPAN17-206ENST00000507471 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
TSPAN17-206ENST00000507471 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
TSPAN17-206ENST00000507471 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
TSPAN17-206ENST00000507471 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
TSPAN17-206ENST00000507471 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
TSPAN17-206ENST00000507471 GRIN2AQ12879 1464 aa25.05■■□□□ 1.6
TSPAN17-206ENST00000507471 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
TSPAN17-206ENST00000507471 ADAMTS12P58397 1594 aa25.03■■□□□ 1.6
TSPAN17-206ENST00000507471 BIVM-ERCC5R4GMW8 1640 aa25.02■■□□□ 1.6
TSPAN17-206ENST00000507471 ERCC6L2Q5T890 1561 aa25.01■■□□□ 1.59
TSPAN17-206ENST00000507471 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
TSPAN17-206ENST00000507471 CEP170Q5SW79 1584 aa24.99■■□□□ 1.59
TSPAN17-206ENST00000507471 NUP160Q12769 1436 aa24.97■■□□□ 1.59
TSPAN17-206ENST00000507471 FHAD1B1AJZ9 1412 aa24.92■■□□□ 1.58
TSPAN17-206ENST00000507471 SHROOM2Q13796 1616 aa24.91■■□□□ 1.58
TSPAN17-206ENST00000507471 ERICH3Q5RHP9 1530 aa24.89■■□□□ 1.57
TSPAN17-206ENST00000507471 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
TSPAN17-206ENST00000507471 PRG4Q92954 1404 aaPredicted RBP24.73■■□□□ 1.55
TSPAN17-206ENST00000507471 RUSC2Q8N2Y8 1516 aa24.69■■□□□ 1.54
TSPAN17-206ENST00000507471 KIF13AQ9H1H9 1805 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms