RNA–Protein interactions for RNA: ENST00000586539.5

ABCA8-208, Transcript of ATP binding cassette subfamily A member 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCA8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-208ENST00000586539 MYT1Q01538 1121 aa19.36■□□□□ 0.69
ABCA8-208ENST00000586539 PELP1Q8IZL8 1130 aaKnown RBP19.11■□□□□ 0.65
ABCA8-208ENST00000586539 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
ABCA8-208ENST00000586539 NISCHQ9Y2I1 1504 aa18.7■□□□□ 0.58
ABCA8-208ENST00000586539 TTBK1Q5TCY1 1321 aaPredicted RBP18.05■□□□□ 0.48
ABCA8-208ENST00000586539 SUPT5HO00267 1087 aaKnown RBP17.88■□□□□ 0.45
ABCA8-208ENST00000586539 ERICH6Q7L0X2 663 aa17.79■□□□□ 0.44
ABCA8-208ENST00000586539 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
ABCA8-208ENST00000586539 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
ABCA8-208ENST00000586539 CENPBP07199 599 aaPredicted RBP17.53■□□□□ 0.4
ABCA8-208ENST00000586539 YTHDC1Q96MU7 727 aaKnown RBP17.28■□□□□ 0.36
ABCA8-208ENST00000586539 FAM9AQ8IZU1 332 aaPredicted RBP17.26■□□□□ 0.35
ABCA8-208ENST00000586539 APLP2Q06481 763 aa17.24■□□□□ 0.35
ABCA8-208ENST00000586539 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
ABCA8-208ENST00000586539 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
ABCA8-208ENST00000586539 NEFLP07196 543 aa16.78■□□□□ 0.28
ABCA8-208ENST00000586539 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
ABCA8-208ENST00000586539 GLIPR1L2Q4G1C9 344 aa16.71■□□□□ 0.27
ABCA8-208ENST00000586539 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
ABCA8-208ENST00000586539 RANGAP1P46060 587 aaPredicted RBP16.6■□□□□ 0.25
ABCA8-208ENST00000586539 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
ABCA8-208ENST00000586539 UBTFP17480 764 aaKnown RBP16.53■□□□□ 0.24
ABCA8-208ENST00000586539 ATP1B4Q9UN42 357 aaPredicted RBP16.48■□□□□ 0.23
ABCA8-208ENST00000586539 DAXXQ9UER7 740 aaPredicted RBP16.44■□□□□ 0.22
ABCA8-208ENST00000586539 EIF5BO60841 1220 aaKnown RBP16.41■□□□□ 0.22
ABCA8-208ENST00000586539 HRCP23327 699 aa16.36■□□□□ 0.21
ABCA8-208ENST00000586539 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
ABCA8-208ENST00000586539 MYT1LQ9UL68 1186 aa16.24■□□□□ 0.19
ABCA8-208ENST00000586539 ABCC9O60706 1549 aa16.05■□□□□ 0.16
ABCA8-208ENST00000586539 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
ABCA8-208ENST00000586539 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
ABCA8-208ENST00000586539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
ABCA8-208ENST00000586539 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
ABCA8-208ENST00000586539 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
ABCA8-208ENST00000586539 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
ABCA8-208ENST00000586539 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
ABCA8-208ENST00000586539 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
ABCA8-208ENST00000586539 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
ABCA8-208ENST00000586539 CLSPNQ9HAW4 1339 aa15.81■□□□□ 0.12
ABCA8-208ENST00000586539 ITGAEP38570 1179 aa15.81■□□□□ 0.12
ABCA8-208ENST00000586539 ACIN1Q9UKV3 1341 aaKnown RBP15.79■□□□□ 0.12
ABCA8-208ENST00000586539 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.12
ABCA8-208ENST00000586539 TNNT2P45379 298 aaPredicted RBP15.73■□□□□ 0.11
ABCA8-208ENST00000586539 LOC105371045A0A1W2PR82 267 aa15.7■□□□□ 0.1
ABCA8-208ENST00000586539 ANP32EQ9BTT0 268 aa15.69■□□□□ 0.1
ABCA8-208ENST00000586539 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
ABCA8-208ENST00000586539 POLR3GLQ9BT43 218 aa15.64■□□□□ 0.09
ABCA8-208ENST00000586539 CDK11BP21127 795 aaKnown RBP15.61■□□□□ 0.09
ABCA8-208ENST00000586539 ANP32AP39687 249 aaKnown RBP15.6■□□□□ 0.09
ABCA8-208ENST00000586539 NCLP19338 710 aaKnown RBP15.59■□□□□ 0.09
ABCA8-208ENST00000586539 FAM50AQ14320 339 aaKnown RBP15.58■□□□□ 0.08
ABCA8-208ENST00000586539 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
ABCA8-208ENST00000586539 ANP32BQ92688 251 aaKnown RBP15.52■□□□□ 0.07
ABCA8-208ENST00000586539 BCANQ96GW7 911 aa15.52■□□□□ 0.07
ABCA8-208ENST00000586539 TRIM52Q96A61 297 aa15.51■□□□□ 0.07
ABCA8-208ENST00000586539 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
ABCA8-208ENST00000586539 PRKCSHP14314 528 aaPredicted RBP15.47■□□□□ 0.07
ABCA8-208ENST00000586539 TRIM44Q96DX7 344 aaPredicted RBP15.46■□□□□ 0.07
ABCA8-208ENST00000586539 FBLN2P98095 1184 aa15.46■□□□□ 0.06
ABCA8-208ENST00000586539 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
ABCA8-208ENST00000586539 SCRIBQ14160 1630 aa15.45■□□□□ 0.06
ABCA8-208ENST00000586539 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
ABCA8-208ENST00000586539 ERICH6BQ5W0A0 696 aa15.41■□□□□ 0.06
ABCA8-208ENST00000586539 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
ABCA8-208ENST00000586539 PODXL2Q9NZ53 605 aa15.35■□□□□ 0.05
ABCA8-208ENST00000586539 ZNF326Q5BKZ1 582 aaKnown RBP15.34■□□□□ 0.05
ABCA8-208ENST00000586539 NBR1Q14596 966 aa15.34■□□□□ 0.05
ABCA8-208ENST00000586539 RB1CC1Q8TDY2 1594 aa15.29■□□□□ 0.04
ABCA8-208ENST00000586539 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
ABCA8-208ENST00000586539 CNGB1Q14028 1251 aaPredicted RBP15.28■□□□□ 0.04
ABCA8-208ENST00000586539 ZBTB47Q9UFB7 747 aaPredicted RBP15.25■□□□□ 0.03
ABCA8-208ENST00000586539 ANP32CO43423 234 aa15.23■□□□□ 0.03
ABCA8-208ENST00000586539 NAP1L5Q96NT1 182 aaPredicted RBP15.21■□□□□ 0.03
ABCA8-208ENST00000586539 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
ABCA8-208ENST00000586539 P3H3Q8IVL6 736 aa15.18■□□□□ 0.02
ABCA8-208ENST00000586539 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
ABCA8-208ENST00000586539 NEFMP07197 916 aa15.16■□□□□ 0.02
ABCA8-208ENST00000586539 PTMSP20962 102 aa15.16■□□□□ 0.02
ABCA8-208ENST00000586539 NACADO15069 1562 aa15.15■□□□□ 0.02
ABCA8-208ENST00000586539 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
ABCA8-208ENST00000586539 NPM2Q86SE8 214 aaKnown RBP15.13■□□□□ 0.01
ABCA8-208ENST00000586539 PKNOX2Q96KN3 472 aa15.13■□□□□ 0.01
ABCA8-208ENST00000586539 ZNF777Q9ULD5 760 aaPredicted RBP15.12■□□□□ 0.01
ABCA8-208ENST00000586539 AMER1Q5JTC6 1135 aaPredicted RBP15.1■□□□□ 0.01
ABCA8-208ENST00000586539 HSP90AA1P07900 732 aaKnown RBP15.06■□□□□ 0
ABCA8-208ENST00000586539 ARID3CA6NKF2 412 aa15.06■□□□□ 0
ABCA8-208ENST00000586539 VSIG10Q8N0Z9 540 aa15.06■□□□□ 0
ABCA8-208ENST00000586539 DEKP35659 375 aaKnown RBP15.05■□□□□ -0
ABCA8-208ENST00000586539 FKBP8Q14318 412 aa15.05■□□□□ -0
ABCA8-208ENST00000586539 EEA1Q15075 1411 aa15.04■□□□□ -0
ABCA8-208ENST00000586539 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
ABCA8-208ENST00000586539 TONSLQ96HA7 1378 aa15.01□□□□□ -0.01
ABCA8-208ENST00000586539 A0A0U1RQG5 324 aaPredicted RBP15□□□□□ -0.01
ABCA8-208ENST00000586539 DCAF1Q9Y4B6 1507 aa15□□□□□ -0.01
ABCA8-208ENST00000586539 CANXP27824 592 aaKnown RBP14.98□□□□□ -0.01
ABCA8-208ENST00000586539 CHMP7Q8WUX9 453 aaPredicted RBP14.98□□□□□ -0.01
ABCA8-208ENST00000586539 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
ABCA8-208ENST00000586539 PPM1GO15355 546 aaPredicted RBP14.96□□□□□ -0.01
ABCA8-208ENST00000586539 TNNT3P45378 269 aaPredicted RBP14.96□□□□□ -0.02
ABCA8-208ENST00000586539 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms