RNA–Protein interactions for RNA: ENST00000572619.1

PKMYT1-208, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 4

Gene PKMYT1, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-208ENST00000572619 NISCHQ9Y2I1 1504 aa39.35■■■■□ 3.89
PKMYT1-208ENST00000572619 CCDC180Q9P1Z9 1646 aa35.23■■■■□ 3.23
PKMYT1-208ENST00000572619 ABCC9O60706 1549 aa34.74■■■■□ 3.15
PKMYT1-208ENST00000572619 RB1CC1Q8TDY2 1594 aa33.28■■■□□ 2.92
PKMYT1-208ENST00000572619 NACADO15069 1562 aa33.17■■■□□ 2.9
PKMYT1-208ENST00000572619 MYO15BQ96JP2 1530 aa32.93■■■□□ 2.86
PKMYT1-208ENST00000572619 ZCCHC6Q5VYS8 1495 aaKnown RBP32.73■■■□□ 2.83
PKMYT1-208ENST00000572619 DCAF8L2P0C7V8 631 aa32.68■■■□□ 2.82
PKMYT1-208ENST00000572619 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
PKMYT1-208ENST00000572619 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
PKMYT1-208ENST00000572619 BICRAQ9NZM4 1560 aa32.41■■■□□ 2.78
PKMYT1-208ENST00000572619 DNAJC5BQ9UF47 199 aa32.35■■■□□ 2.77
PKMYT1-208ENST00000572619 PABPN1Q86U42 306 aaKnown RBP eCLIP32.31■■■□□ 2.76
PKMYT1-208ENST00000572619 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
PKMYT1-208ENST00000572619 SCRIBQ14160 1630 aa31.99■■■□□ 2.71
PKMYT1-208ENST00000572619 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.64
PKMYT1-208ENST00000572619 CC2D2AQ9P2K1 1620 aa31.48■■■□□ 2.63
PKMYT1-208ENST00000572619 CECR2Q9BXF3 1484 aa31.29■■■□□ 2.6
PKMYT1-208ENST00000572619 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
PKMYT1-208ENST00000572619 SMARCA4P51532 1647 aa30.63■■■□□ 2.49
PKMYT1-208ENST00000572619 ATAD2BQ9ULI0 1458 aa30.56■■■□□ 2.48
PKMYT1-208ENST00000572619 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
PKMYT1-208ENST00000572619 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
PKMYT1-208ENST00000572619 HMGXB3Q12766 1538 aa30.47■■■□□ 2.47
PKMYT1-208ENST00000572619 PEG3Q9GZU2 1588 aa30.42■■■□□ 2.46
PKMYT1-208ENST00000572619 MROH2BQ7Z745 1585 aa30.3■■■□□ 2.44
PKMYT1-208ENST00000572619 BAZ1BQ9UIG0 1483 aaKnown RBP30.22■■■□□ 2.43
PKMYT1-208ENST00000572619 NESP48681 1621 aa29.99■■■□□ 2.39
PKMYT1-208ENST00000572619 WIZO95785 1651 aa29.93■■■□□ 2.38
PKMYT1-208ENST00000572619 ERCC6Q03468 1493 aa29.92■■■□□ 2.38
PKMYT1-208ENST00000572619 CUX2O14529 1486 aa29.91■■■□□ 2.38
PKMYT1-208ENST00000572619 LAMC3Q9Y6N6 1575 aa29.87■■■□□ 2.37
PKMYT1-208ENST00000572619 RSF1Q96T23 1441 aaPredicted RBP29.78■■■□□ 2.36
PKMYT1-208ENST00000572619 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
PKMYT1-208ENST00000572619 KIF21AQ7Z4S6 1674 aa29.65■■■□□ 2.34
PKMYT1-208ENST00000572619 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.34
PKMYT1-208ENST00000572619 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
PKMYT1-208ENST00000572619 PDS5BQ9NTI5 1447 aa29.61■■■□□ 2.33
PKMYT1-208ENST00000572619 DNAJC5Q9H3Z4 198 aa29.45■■■□□ 2.31
PKMYT1-208ENST00000572619 CFTRP13569 1480 aa29.44■■■□□ 2.3
PKMYT1-208ENST00000572619 MRC2Q9UBG0 1479 aa29.38■■■□□ 2.29
PKMYT1-208ENST00000572619 WDR62O43379 1518 aa29.37■■■□□ 2.29
PKMYT1-208ENST00000572619 FANCD2Q9BXW9 1451 aa29.3■■■□□ 2.28
PKMYT1-208ENST00000572619 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
PKMYT1-208ENST00000572619 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
PKMYT1-208ENST00000572619 PRDM2Q13029 1718 aa29.22■■■□□ 2.27
PKMYT1-208ENST00000572619 URB2Q14146 1524 aaKnown RBP29.1■■■□□ 2.25
PKMYT1-208ENST00000572619 TOPBP1Q92547 1522 aa28.82■■■□□ 2.2
PKMYT1-208ENST00000572619 DNMBPQ6XZF7 1577 aa28.75■■■□□ 2.19
PKMYT1-208ENST00000572619 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
PKMYT1-208ENST00000572619 IFT140Q96RY7 1462 aa28.73■■■□□ 2.19
PKMYT1-208ENST00000572619 ZNF608Q9ULD9 1512 aaPredicted RBP28.65■■■□□ 2.18
PKMYT1-208ENST00000572619 TARBP1Q13395 1621 aaKnown RBP28.6■■■□□ 2.17
PKMYT1-208ENST00000572619 POLA1P09884 1462 aaPredicted RBP28.55■■■□□ 2.16
PKMYT1-208ENST00000572619 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
PKMYT1-208ENST00000572619 CUX1P39880 1505 aa28.46■■■□□ 2.15
PKMYT1-208ENST00000572619 SUPT5HO00267 1087 aaKnown RBP28.43■■■□□ 2.14
PKMYT1-208ENST00000572619 OSCARQ8IYS5 282 aa28.43■■■□□ 2.14
PKMYT1-208ENST00000572619 FGD5Q6ZNL6 1462 aa28.39■■■□□ 2.13
PKMYT1-208ENST00000572619 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.13
PKMYT1-208ENST00000572619 AQRO60306 1485 aaKnown RBP eCLIP28.38■■■□□ 2.132e-6■□□□□ 8.5
PKMYT1-208ENST00000572619 WDR97A6NE52 1622 aa28.36■■■□□ 2.13
PKMYT1-208ENST00000572619 SOGA1O94964 1423 aa28.35■■■□□ 2.13
PKMYT1-208ENST00000572619 CHD1O14646 1710 aa28.26■■■□□ 2.11
PKMYT1-208ENST00000572619 TDRD9Q8NDG6 1382 aaKnown RBP28.23■■■□□ 2.11
PKMYT1-208ENST00000572619 RIMBP3CA6NJZ7 1639 aa28.17■■■□□ 2.1
PKMYT1-208ENST00000572619 RIMBP3BA6NNM3 1639 aa28.17■■■□□ 2.1
PKMYT1-208ENST00000572619 RIMBP3Q9UFD9 1639 aa28.17■■■□□ 2.1
PKMYT1-208ENST00000572619 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
PKMYT1-208ENST00000572619 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
PKMYT1-208ENST00000572619 SNAPC4Q5SXM2 1469 aa28.13■■■□□ 2.09
PKMYT1-208ENST00000572619 MAGI1Q96QZ7 1491 aaPredicted RBP28.12■■■□□ 2.09
PKMYT1-208ENST00000572619 GRIN2BQ13224 1484 aa28.11■■■□□ 2.09
PKMYT1-208ENST00000572619 ARHGEF11O15085 1522 aa28.11■■■□□ 2.09
PKMYT1-208ENST00000572619 ABCA5Q8WWZ7 1642 aa28.1■■■□□ 2.09
PKMYT1-208ENST00000572619 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
PKMYT1-208ENST00000572619 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
PKMYT1-208ENST00000572619 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
PKMYT1-208ENST00000572619 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
PKMYT1-208ENST00000572619 WRNQ14191 1432 aaPredicted RBP eCLIP28.04■■■□□ 2.081e-7■■□□□ 12.5
PKMYT1-208ENST00000572619 GAPVD1Q14C86 1478 aa28.03■■■□□ 2.08
PKMYT1-208ENST00000572619 CLASP1Q7Z460 1538 aa28.01■■■□□ 2.07
PKMYT1-208ENST00000572619 SYNJ2O15056 1496 aa28■■■□□ 2.07
PKMYT1-208ENST00000572619 FBLN2P98095 1184 aa27.93■■■□□ 2.06
PKMYT1-208ENST00000572619 ARAP1Q96P48 1450 aa27.88■■■□□ 2.05
PKMYT1-208ENST00000572619 CHMP7Q8WUX9 453 aaPredicted RBP27.86■■■□□ 2.05
PKMYT1-208ENST00000572619 ADAMTS12P58397 1594 aa27.84■■■□□ 2.05
PKMYT1-208ENST00000572619 ERICH3Q5RHP9 1530 aa27.78■■■□□ 2.04
PKMYT1-208ENST00000572619 GRIN2AQ12879 1464 aa27.76■■■□□ 2.04
PKMYT1-208ENST00000572619 NUP160Q12769 1436 aa27.72■■■□□ 2.03
PKMYT1-208ENST00000572619 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
PKMYT1-208ENST00000572619 CYB5RLQ6IPT4 315 aa27.7■■■□□ 2.02
PKMYT1-208ENST00000572619 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
PKMYT1-208ENST00000572619 SHROOM2Q13796 1616 aa27.6■■■□□ 2.01
PKMYT1-208ENST00000572619 ERCC6L2Q5T890 1561 aa27.55■■■□□ 2
PKMYT1-208ENST00000572619 IGF1RP08069 1367 aa27.46■■□□□ 1.99
PKMYT1-208ENST00000572619 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
PKMYT1-208ENST00000572619 RUSC2Q8N2Y8 1516 aa27.45■■□□□ 1.98
PKMYT1-208ENST00000572619 CUL7Q14999 1698 aa27.43■■□□□ 1.98
PKMYT1-208ENST00000572619 PRG4Q92954 1404 aaPredicted RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms