RNA–Protein interactions for RNA: ENST00000575087.5

ACTG1-208, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ACTG1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-208ENST00000575087 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
ACTG1-208ENST00000575087 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
ACTG1-208ENST00000575087 ZCCHC6Q5VYS8 1495 aaKnown RBP30.64■■■□□ 2.49
ACTG1-208ENST00000575087 SHROOM4Q9ULL8 1493 aa30.26■■■□□ 2.43
ACTG1-208ENST00000575087 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
ACTG1-208ENST00000575087 DCAF8L2P0C7V8 631 aa29.79■■■□□ 2.36
ACTG1-208ENST00000575087 SUPT5HO00267 1087 aaKnown RBP29.42■■■□□ 2.3
ACTG1-208ENST00000575087 MYO15BQ96JP2 1530 aa29.25■■■□□ 2.27
ACTG1-208ENST00000575087 ABCC9O60706 1549 aa29.03■■■□□ 2.24
ACTG1-208ENST00000575087 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
ACTG1-208ENST00000575087 NACADO15069 1562 aa28.91■■■□□ 2.22
ACTG1-208ENST00000575087 CHIC1Q5VXU3 224 aa28.52■■■□□ 2.16
ACTG1-208ENST00000575087 RB1CC1Q8TDY2 1594 aa28.51■■■□□ 2.15
ACTG1-208ENST00000575087 RSF1Q96T23 1441 aaPredicted RBP28.46■■■□□ 2.15
ACTG1-208ENST00000575087 CECR2Q9BXF3 1484 aa28.24■■■□□ 2.11
ACTG1-208ENST00000575087 UNC13AQ9UPW8 1703 aa28.16■■■□□ 2.1
ACTG1-208ENST00000575087 MROH2BQ7Z745 1585 aa28.14■■■□□ 2.1
ACTG1-208ENST00000575087 WIZO95785 1651 aa27.98■■■□□ 2.07
ACTG1-208ENST00000575087 BAZ1AQ9NRL2 1556 aaPredicted RBP27.92■■■□□ 2.06
ACTG1-208ENST00000575087 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
ACTG1-208ENST00000575087 SMARCA4P51532 1647 aa27.77■■■□□ 2.04
ACTG1-208ENST00000575087 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
ACTG1-208ENST00000575087 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
ACTG1-208ENST00000575087 EIF4G1Q04637 1599 aaKnown RBP27.54■■■□□ 2
ACTG1-208ENST00000575087 LOC105371045A0A1W2PR82 267 aa27.53■■■□□ 2
ACTG1-208ENST00000575087 TRIM41Q8WV44 630 aa27.51■■■□□ 2
ACTG1-208ENST00000575087 SMARCA2P51531 1590 aa27.42■■□□□ 1.98
ACTG1-208ENST00000575087 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
ACTG1-208ENST00000575087 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
ACTG1-208ENST00000575087 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
ACTG1-208ENST00000575087 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
ACTG1-208ENST00000575087 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
ACTG1-208ENST00000575087 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
ACTG1-208ENST00000575087 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
ACTG1-208ENST00000575087 EHMT2Q96KQ7 1210 aa26.82■■□□□ 1.88
ACTG1-208ENST00000575087 HRCP23327 699 aa26.78■■□□□ 1.88
ACTG1-208ENST00000575087 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.871e-8■□□□□ 10.4
ACTG1-208ENST00000575087 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
ACTG1-208ENST00000575087 SOGA1O94964 1423 aa26.72■■□□□ 1.87
ACTG1-208ENST00000575087 TRIM26Q12899 539 aaPredicted RBP26.71■■□□□ 1.87
ACTG1-208ENST00000575087 NCAPD3P42695 1498 aa26.7■■□□□ 1.86
ACTG1-208ENST00000575087 SYNJ1O43426 1573 aa26.69■■□□□ 1.86
ACTG1-208ENST00000575087 RUSC2Q8N2Y8 1516 aa26.64■■□□□ 1.85
ACTG1-208ENST00000575087 EEA1Q15075 1411 aa26.63■■□□□ 1.85
ACTG1-208ENST00000575087 CSRNP3Q8WYN3 585 aa26.5■■□□□ 1.83
ACTG1-208ENST00000575087 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
ACTG1-208ENST00000575087 TNIKQ9UKE5 1360 aa26.43■■□□□ 1.82
ACTG1-208ENST00000575087 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
ACTG1-208ENST00000575087 CEP162Q5TB80 1403 aa26.39■■□□□ 1.82
ACTG1-208ENST00000575087 GOLGA3Q08378 1498 aa26.38■■□□□ 1.81
ACTG1-208ENST00000575087 KIF21BO75037 1637 aa26.35■■□□□ 1.81
ACTG1-208ENST00000575087 CFTRP13569 1480 aa26.34■■□□□ 1.81
ACTG1-208ENST00000575087 PRDM2Q13029 1718 aa26.29■■□□□ 1.8
ACTG1-208ENST00000575087 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
ACTG1-208ENST00000575087 CC2D2AQ9P2K1 1620 aa26.27■■□□□ 1.8
ACTG1-208ENST00000575087 CUX1P39880 1505 aa26.25■■□□□ 1.79
ACTG1-208ENST00000575087 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
ACTG1-208ENST00000575087 PPARGC1BQ86YN6 1023 aaKnown RBP26.22■■□□□ 1.79
ACTG1-208ENST00000575087 RAPGEF2Q9Y4G8 1499 aa26.13■■□□□ 1.77
ACTG1-208ENST00000575087 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
ACTG1-208ENST00000575087 PRXQ9BXM0 1461 aa26.01■■□□□ 1.75
ACTG1-208ENST00000575087 ERICH3Q5RHP9 1530 aa26■■□□□ 1.75
ACTG1-208ENST00000575087 CLIP1P30622 1438 aa26■■□□□ 1.75
ACTG1-208ENST00000575087 KIF27Q86VH2 1401 aa25.95■■□□□ 1.74
ACTG1-208ENST00000575087 ZEB1P37275 1124 aaPredicted RBP25.92■■□□□ 1.74
ACTG1-208ENST00000575087 VPS8Q8N3P4 1428 aa25.87■■□□□ 1.73
ACTG1-208ENST00000575087 TTBK1Q5TCY1 1321 aaPredicted RBP25.86■■□□□ 1.73
ACTG1-208ENST00000575087 FANCD2Q9BXW9 1451 aa25.84■■□□□ 1.73
ACTG1-208ENST00000575087 FGD5Q6ZNL6 1462 aa25.83■■□□□ 1.72
ACTG1-208ENST00000575087 CUX2O14529 1486 aa25.78■■□□□ 1.72
ACTG1-208ENST00000575087 NESP48681 1621 aa25.76■■□□□ 1.71
ACTG1-208ENST00000575087 ARAP1Q96P48 1450 aa25.72■■□□□ 1.71
ACTG1-208ENST00000575087 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
ACTG1-208ENST00000575087 RANGAP1P46060 587 aaPredicted RBP25.71■■□□□ 1.71
ACTG1-208ENST00000575087 IGF1RP08069 1367 aa25.69■■□□□ 1.7
ACTG1-208ENST00000575087 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
ACTG1-208ENST00000575087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.66■■□□□ 1.7
ACTG1-208ENST00000575087 TOPBP1Q92547 1522 aa25.65■■□□□ 1.7
ACTG1-208ENST00000575087 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
ACTG1-208ENST00000575087 ARHGAP35Q9NRY4 1499 aa25.57■■□□□ 1.68
ACTG1-208ENST00000575087 RAD54L2Q9Y4B4 1467 aa25.56■■□□□ 1.68
ACTG1-208ENST00000575087 ABCA10Q8WWZ4 1543 aa25.56■■□□□ 1.68
ACTG1-208ENST00000575087 CARMIL1Q5VZK9 1371 aa25.56■■□□□ 1.68
ACTG1-208ENST00000575087 CCER1Q8TC90 406 aaPredicted RBP25.56■■□□□ 1.68
ACTG1-208ENST00000575087 APLP2Q06481 763 aa25.54■■□□□ 1.68
ACTG1-208ENST00000575087 DNAJC5BQ9UF47 199 aa25.54■■□□□ 1.68
ACTG1-208ENST00000575087 URB2Q14146 1524 aaKnown RBP25.52■■□□□ 1.68
ACTG1-208ENST00000575087 PELP1Q8IZL8 1130 aaKnown RBP25.49■■□□□ 1.67
ACTG1-208ENST00000575087 WDR97A6NE52 1622 aa25.49■■□□□ 1.67
ACTG1-208ENST00000575087 KIF21AQ7Z4S6 1674 aa25.44■■□□□ 1.66
ACTG1-208ENST00000575087 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
ACTG1-208ENST00000575087 CUL7Q14999 1698 aa25.4■■□□□ 1.66
ACTG1-208ENST00000575087 KANK4Q5T7N3 995 aaPredicted RBP25.37■■□□□ 1.65
ACTG1-208ENST00000575087 ABCA5Q8WWZ7 1642 aa25.35■■□□□ 1.65
ACTG1-208ENST00000575087 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
ACTG1-208ENST00000575087 CTTNBP2Q8WZ74 1663 aa25.3■■□□□ 1.64
ACTG1-208ENST00000575087 MAP3K1Q13233 1512 aa25.24■■□□□ 1.63
ACTG1-208ENST00000575087 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
ACTG1-208ENST00000575087 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
ACTG1-208ENST00000575087 RRBP1Q9P2E9 1410 aaKnown RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms