RNA–Protein interactions for RNA: ENST00000588016.1

CLASRP-209, Transcript of CLK4 associating serine/arginine rich protein, humanhuman

TSL 2

Gene CLASRP, Length 967 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASRP-209ENST00000588016 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
CLASRP-209ENST00000588016 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
CLASRP-209ENST00000588016 ABCC9O60706 1549 aa18.83■□□□□ 0.6
CLASRP-209ENST00000588016 DCAF8L2P0C7V8 631 aa18.31■□□□□ 0.52
CLASRP-209ENST00000588016 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
CLASRP-209ENST00000588016 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
CLASRP-209ENST00000588016 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
CLASRP-209ENST00000588016 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
CLASRP-209ENST00000588016 NACADO15069 1562 aa18.01■□□□□ 0.47
CLASRP-209ENST00000588016 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
CLASRP-209ENST00000588016 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
CLASRP-209ENST00000588016 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
CLASRP-209ENST00000588016 SCRIBQ14160 1630 aa17.58■□□□□ 0.4
CLASRP-209ENST00000588016 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.394e-8■■■■■ 30
CLASRP-209ENST00000588016 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
CLASRP-209ENST00000588016 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
CLASRP-209ENST00000588016 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.32
CLASRP-209ENST00000588016 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
CLASRP-209ENST00000588016 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
CLASRP-209ENST00000588016 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
CLASRP-209ENST00000588016 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
CLASRP-209ENST00000588016 SUPT5HO00267 1087 aaKnown RBP16.84■□□□□ 0.29
CLASRP-209ENST00000588016 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
CLASRP-209ENST00000588016 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
CLASRP-209ENST00000588016 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
CLASRP-209ENST00000588016 PEG3Q9GZU2 1588 aa16.65■□□□□ 0.26
CLASRP-209ENST00000588016 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
CLASRP-209ENST00000588016 WIZO95785 1651 aa16.65■□□□□ 0.26
CLASRP-209ENST00000588016 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
CLASRP-209ENST00000588016 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
CLASRP-209ENST00000588016 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
CLASRP-209ENST00000588016 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
CLASRP-209ENST00000588016 NESP48681 1621 aa16.29■□□□□ 0.2
CLASRP-209ENST00000588016 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
CLASRP-209ENST00000588016 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
CLASRP-209ENST00000588016 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
CLASRP-209ENST00000588016 KIF21AQ7Z4S6 1674 aa16.17■□□□□ 0.18
CLASRP-209ENST00000588016 CFTRP13569 1480 aa16.16■□□□□ 0.18
CLASRP-209ENST00000588016 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.17
CLASRP-209ENST00000588016 CUX2O14529 1486 aa16.13■□□□□ 0.17
CLASRP-209ENST00000588016 PDS5BQ9NTI5 1447 aa16.08■□□□□ 0.16
CLASRP-209ENST00000588016 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
CLASRP-209ENST00000588016 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
CLASRP-209ENST00000588016 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
CLASRP-209ENST00000588016 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
CLASRP-209ENST00000588016 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
CLASRP-209ENST00000588016 WDR62O43379 1518 aa15.92■□□□□ 0.14
CLASRP-209ENST00000588016 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
CLASRP-209ENST00000588016 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
CLASRP-209ENST00000588016 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
CLASRP-209ENST00000588016 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
CLASRP-209ENST00000588016 URB2Q14146 1524 aaKnown RBP15.8■□□□□ 0.12
CLASRP-209ENST00000588016 DNAJC5Q9H3Z4 198 aa15.79■□□□□ 0.12
CLASRP-209ENST00000588016 CUX1P39880 1505 aa15.78■□□□□ 0.12
CLASRP-209ENST00000588016 DNMBPQ6XZF7 1577 aa15.76■□□□□ 0.11
CLASRP-209ENST00000588016 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
CLASRP-209ENST00000588016 TOP2BQ02880 1626 aa15.74■□□□□ 0.11
CLASRP-209ENST00000588016 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
CLASRP-209ENST00000588016 BIVM-ERCC5R4GMW8 1640 aa15.69■□□□□ 0.1
CLASRP-209ENST00000588016 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
CLASRP-209ENST00000588016 SOGA1O94964 1423 aa15.68■□□□□ 0.1
CLASRP-209ENST00000588016 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
CLASRP-209ENST00000588016 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
CLASRP-209ENST00000588016 RAD54L2Q9Y4B4 1467 aa15.6■□□□□ 0.09
CLASRP-209ENST00000588016 KIF27Q86VH2 1401 aa15.56■□□□□ 0.08
CLASRP-209ENST00000588016 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
CLASRP-209ENST00000588016 ABCA10Q8WWZ4 1543 aa15.55■□□□□ 0.08
CLASRP-209ENST00000588016 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
CLASRP-209ENST00000588016 FAM9AQ8IZU1 332 aaPredicted RBP15.55■□□□□ 0.08
CLASRP-209ENST00000588016 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
CLASRP-209ENST00000588016 EEA1Q15075 1411 aa15.53■□□□□ 0.08
CLASRP-209ENST00000588016 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
CLASRP-209ENST00000588016 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
CLASRP-209ENST00000588016 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
CLASRP-209ENST00000588016 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.071e-7■■■■□ 26.1
CLASRP-209ENST00000588016 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.07
CLASRP-209ENST00000588016 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
CLASRP-209ENST00000588016 IGF1RP08069 1367 aa15.44■□□□□ 0.06
CLASRP-209ENST00000588016 CHD1O14646 1710 aa15.42■□□□□ 0.06
CLASRP-209ENST00000588016 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
CLASRP-209ENST00000588016 CARMIL1Q5VZK9 1371 aa15.37■□□□□ 0.05
CLASRP-209ENST00000588016 ABCA5Q8WWZ7 1642 aa15.37■□□□□ 0.05
CLASRP-209ENST00000588016 ERICH3Q5RHP9 1530 aa15.37■□□□□ 0.05
CLASRP-209ENST00000588016 PBRM1Q86U86 1689 aa15.33■□□□□ 0.04
CLASRP-209ENST00000588016 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
CLASRP-209ENST00000588016 FBLN2P98095 1184 aa15.32■□□□□ 0.04
CLASRP-209ENST00000588016 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
CLASRP-209ENST00000588016 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
CLASRP-209ENST00000588016 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
CLASRP-209ENST00000588016 MAGI1Q96QZ7 1491 aaPredicted RBP15.31■□□□□ 0.04
CLASRP-209ENST00000588016 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
CLASRP-209ENST00000588016 SNAPC4Q5SXM2 1469 aa15.3■□□□□ 0.04
CLASRP-209ENST00000588016 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
CLASRP-209ENST00000588016 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
CLASRP-209ENST00000588016 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
CLASRP-209ENST00000588016 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
CLASRP-209ENST00000588016 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
CLASRP-209ENST00000588016 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
CLASRP-209ENST00000588016 CUL7Q14999 1698 aa15.27■□□□□ 0.03
CLASRP-209ENST00000588016 SYNJ2O15056 1496 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms