RNA–Protein interactions for RNA: ENST00000576917.5

ACTG1-215, Transcript of actin gamma 1, humanhuman

TSL 5

Gene ACTG1, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-215ENST00000576917 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
ACTG1-215ENST00000576917 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
ACTG1-215ENST00000576917 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
ACTG1-215ENST00000576917 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
ACTG1-215ENST00000576917 DCAF1Q9Y4B6 1507 aa24.58■■□□□ 1.53
ACTG1-215ENST00000576917 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
ACTG1-215ENST00000576917 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
ACTG1-215ENST00000576917 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
ACTG1-215ENST00000576917 SCRIBQ14160 1630 aa23.7■■□□□ 1.38
ACTG1-215ENST00000576917 ABCC9O60706 1549 aa23.69■■□□□ 1.38
ACTG1-215ENST00000576917 NACADO15069 1562 aa23.67■■□□□ 1.38
ACTG1-215ENST00000576917 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
ACTG1-215ENST00000576917 RSF1Q96T23 1441 aaPredicted RBP23.35■■□□□ 1.33
ACTG1-215ENST00000576917 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
ACTG1-215ENST00000576917 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
ACTG1-215ENST00000576917 MROH2BQ7Z745 1585 aa23.04■■□□□ 1.28
ACTG1-215ENST00000576917 UNC13AQ9UPW8 1703 aa23■■□□□ 1.27
ACTG1-215ENST00000576917 WIZO95785 1651 aa22.92■■□□□ 1.26
ACTG1-215ENST00000576917 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
ACTG1-215ENST00000576917 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
ACTG1-215ENST00000576917 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
ACTG1-215ENST00000576917 TOP2AP11388 1531 aaKnown RBP22.65■■□□□ 1.22
ACTG1-215ENST00000576917 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
ACTG1-215ENST00000576917 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
ACTG1-215ENST00000576917 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
ACTG1-215ENST00000576917 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
ACTG1-215ENST00000576917 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
ACTG1-215ENST00000576917 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
ACTG1-215ENST00000576917 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
ACTG1-215ENST00000576917 PCGF6Q9BYE7 350 aa22.33■■□□□ 1.17
ACTG1-215ENST00000576917 HRCP23327 699 aa22.27■■□□□ 1.16
ACTG1-215ENST00000576917 FAM9AQ8IZU1 332 aaPredicted RBP22.27■■□□□ 1.16
ACTG1-215ENST00000576917 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
ACTG1-215ENST00000576917 ATAD2BQ9ULI0 1458 aa22.17■■□□□ 1.14
ACTG1-215ENST00000576917 TRIM26Q12899 539 aaPredicted RBP22.14■■□□□ 1.13
ACTG1-215ENST00000576917 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
ACTG1-215ENST00000576917 EEA1Q15075 1411 aa21.97■■□□□ 1.11
ACTG1-215ENST00000576917 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.11e-8■□□□□ 10.4
ACTG1-215ENST00000576917 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
ACTG1-215ENST00000576917 SOGA1O94964 1423 aa21.91■■□□□ 1.1
ACTG1-215ENST00000576917 HMGXB3Q12766 1538 aa21.89■■□□□ 1.1
ACTG1-215ENST00000576917 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
ACTG1-215ENST00000576917 NCAPD3P42695 1498 aa21.84■■□□□ 1.09
ACTG1-215ENST00000576917 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
ACTG1-215ENST00000576917 TNIKQ9UKE5 1360 aa21.78■■□□□ 1.08
ACTG1-215ENST00000576917 CSRNP3Q8WYN3 585 aa21.78■■□□□ 1.08
ACTG1-215ENST00000576917 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
ACTG1-215ENST00000576917 GOLGA3Q08378 1498 aa21.72■■□□□ 1.07
ACTG1-215ENST00000576917 KIF21BO75037 1637 aa21.71■■□□□ 1.07
ACTG1-215ENST00000576917 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
ACTG1-215ENST00000576917 BIVM-ERCC5R4GMW8 1640 aa21.7■■□□□ 1.07
ACTG1-215ENST00000576917 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
ACTG1-215ENST00000576917 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
ACTG1-215ENST00000576917 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
ACTG1-215ENST00000576917 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
ACTG1-215ENST00000576917 CFTRP13569 1480 aa21.56■■□□□ 1.04
ACTG1-215ENST00000576917 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
ACTG1-215ENST00000576917 CUX1P39880 1505 aa21.49■■□□□ 1.03
ACTG1-215ENST00000576917 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
ACTG1-215ENST00000576917 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
ACTG1-215ENST00000576917 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
ACTG1-215ENST00000576917 CLIP1P30622 1438 aa21.39■■□□□ 1.02
ACTG1-215ENST00000576917 PRXQ9BXM0 1461 aa21.37■■□□□ 1.01
ACTG1-215ENST00000576917 VPS8Q8N3P4 1428 aa21.32■■□□□ 1
ACTG1-215ENST00000576917 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
ACTG1-215ENST00000576917 KIF27Q86VH2 1401 aa21.31■■□□□ 1
ACTG1-215ENST00000576917 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
ACTG1-215ENST00000576917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.17■□□□□ 0.98
ACTG1-215ENST00000576917 ARAP1Q96P48 1450 aa21.14■□□□□ 0.97
ACTG1-215ENST00000576917 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
ACTG1-215ENST00000576917 CCER1Q8TC90 406 aaPredicted RBP21.13■□□□□ 0.97
ACTG1-215ENST00000576917 CUX2O14529 1486 aa21.11■□□□□ 0.97
ACTG1-215ENST00000576917 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
ACTG1-215ENST00000576917 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
ACTG1-215ENST00000576917 IGF1RP08069 1367 aa21.05■□□□□ 0.96
ACTG1-215ENST00000576917 APLP2Q06481 763 aa21.05■□□□□ 0.96
ACTG1-215ENST00000576917 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
ACTG1-215ENST00000576917 LAMC3Q9Y6N6 1575 aa21■□□□□ 0.95
ACTG1-215ENST00000576917 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
ACTG1-215ENST00000576917 TOPBP1Q92547 1522 aa20.97■□□□□ 0.95
ACTG1-215ENST00000576917 NESP48681 1621 aa20.97■□□□□ 0.95
ACTG1-215ENST00000576917 CARMIL1Q5VZK9 1371 aa20.96■□□□□ 0.95
ACTG1-215ENST00000576917 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
ACTG1-215ENST00000576917 POLA1P09884 1462 aaPredicted RBP20.93■□□□□ 0.94
ACTG1-215ENST00000576917 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
ACTG1-215ENST00000576917 CUL7Q14999 1698 aa20.87■□□□□ 0.93
ACTG1-215ENST00000576917 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
ACTG1-215ENST00000576917 HNRNPUL2Q1KMD3 747 aaKnown RBP20.85■□□□□ 0.93
ACTG1-215ENST00000576917 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
ACTG1-215ENST00000576917 MAP3K1Q13233 1512 aa20.83■□□□□ 0.92
ACTG1-215ENST00000576917 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
ACTG1-215ENST00000576917 RRBP1Q9P2E9 1410 aaKnown RBP20.81■□□□□ 0.92
ACTG1-215ENST00000576917 CTTNBP2Q8WZ74 1663 aa20.79■□□□□ 0.92
ACTG1-215ENST00000576917 TIAM1Q13009 1591 aa20.78■□□□□ 0.92
ACTG1-215ENST00000576917 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.92
ACTG1-215ENST00000576917 ABCA5Q8WWZ7 1642 aa20.76■□□□□ 0.91
ACTG1-215ENST00000576917 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
ACTG1-215ENST00000576917 EFCAB5A4FU69 1503 aa20.73■□□□□ 0.91
ACTG1-215ENST00000576917 CFAP43Q8NDM7 1665 aa20.72■□□□□ 0.91
ACTG1-215ENST00000576917 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms