RNA–Protein interactions for RNA: ENST00000621013.4

SLC39A1-211, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-211ENST00000621013 NISCHQ9Y2I1 1504 aa35.85■■■■□ 3.33
SLC39A1-211ENST00000621013 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
SLC39A1-211ENST00000621013 SHROOM4Q9ULL8 1493 aa30.45■■■□□ 2.46
SLC39A1-211ENST00000621013 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
SLC39A1-211ENST00000621013 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
SLC39A1-211ENST00000621013 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
SLC39A1-211ENST00000621013 CHIC1Q5VXU3 224 aa29.4■■■□□ 2.3
SLC39A1-211ENST00000621013 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
SLC39A1-211ENST00000621013 DCAF8L2P0C7V8 631 aa29.32■■■□□ 2.28
SLC39A1-211ENST00000621013 HRCP23327 699 aa28.91■■■□□ 2.22
SLC39A1-211ENST00000621013 ABCC9O60706 1549 aa28.74■■■□□ 2.19
SLC39A1-211ENST00000621013 PCGF6Q9BYE7 350 aa28.6■■■□□ 2.17
SLC39A1-211ENST00000621013 RSF1Q96T23 1441 aaPredicted RBP28.42■■■□□ 2.14
SLC39A1-211ENST00000621013 LOC105371045A0A1W2PR82 267 aa28.41■■■□□ 2.14
SLC39A1-211ENST00000621013 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
SLC39A1-211ENST00000621013 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.11
SLC39A1-211ENST00000621013 TRIM26Q12899 539 aaPredicted RBP28.15■■■□□ 2.1
SLC39A1-211ENST00000621013 NACADO15069 1562 aa28.08■■■□□ 2.09
SLC39A1-211ENST00000621013 PPARGC1BQ86YN6 1023 aaKnown RBP28.08■■■□□ 2.09
SLC39A1-211ENST00000621013 TRIM41Q8WV44 630 aa28■■■□□ 2.07
SLC39A1-211ENST00000621013 CECR2Q9BXF3 1484 aa27.84■■■□□ 2.05
SLC39A1-211ENST00000621013 MROH2BQ7Z745 1585 aa27.82■■■□□ 2.04
SLC39A1-211ENST00000621013 ZEB1P37275 1124 aaPredicted RBP27.72■■■□□ 2.03
SLC39A1-211ENST00000621013 WIZO95785 1651 aa27.67■■■□□ 2.02
SLC39A1-211ENST00000621013 FAM9AQ8IZU1 332 aaPredicted RBP27.64■■■□□ 2.02
SLC39A1-211ENST00000621013 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
SLC39A1-211ENST00000621013 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
SLC39A1-211ENST00000621013 TOP2AP11388 1531 aaKnown RBP27.34■■□□□ 1.97
SLC39A1-211ENST00000621013 EHMT2Q96KQ7 1210 aa27.27■■□□□ 1.96
SLC39A1-211ENST00000621013 SMARCA4P51532 1647 aa27.25■■□□□ 1.95
SLC39A1-211ENST00000621013 SMARCA2P51531 1590 aa27.16■■□□□ 1.94
SLC39A1-211ENST00000621013 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
SLC39A1-211ENST00000621013 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
SLC39A1-211ENST00000621013 UNC13AQ9UPW8 1703 aa27.09■■□□□ 1.93
SLC39A1-211ENST00000621013 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
SLC39A1-211ENST00000621013 EEA1Q15075 1411 aa26.97■■□□□ 1.91
SLC39A1-211ENST00000621013 TNIKQ9UKE5 1360 aa26.93■■□□□ 1.9
SLC39A1-211ENST00000621013 CEP162Q5TB80 1403 aa26.92■■□□□ 1.9
SLC39A1-211ENST00000621013 SOGA1O94964 1423 aa26.89■■□□□ 1.89
SLC39A1-211ENST00000621013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.84■■□□□ 1.89
SLC39A1-211ENST00000621013 CCER1Q8TC90 406 aaPredicted RBP26.83■■□□□ 1.89
SLC39A1-211ENST00000621013 PEG3Q9GZU2 1588 aa26.81■■□□□ 1.88
SLC39A1-211ENST00000621013 CSRNP3Q8WYN3 585 aa26.78■■□□□ 1.88
SLC39A1-211ENST00000621013 BICRAQ9NZM4 1560 aa26.76■■□□□ 1.88
SLC39A1-211ENST00000621013 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
SLC39A1-211ENST00000621013 RUSC2Q8N2Y8 1516 aa26.72■■□□□ 1.87
SLC39A1-211ENST00000621013 SCAF1Q9H7N4 1312 aaKnown RBP26.69■■□□□ 1.86
SLC39A1-211ENST00000621013 UBTFP17480 764 aaKnown RBP26.6■■□□□ 1.85
SLC39A1-211ENST00000621013 PELP1Q8IZL8 1130 aaKnown RBP26.59■■□□□ 1.85
SLC39A1-211ENST00000621013 KIF21BO75037 1637 aa26.57■■□□□ 1.84
SLC39A1-211ENST00000621013 CEP164Q9UPV0 1460 aa26.56■■□□□ 1.84
SLC39A1-211ENST00000621013 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.84
SLC39A1-211ENST00000621013 SYNJ1O43426 1573 aa26.54■■□□□ 1.84
SLC39A1-211ENST00000621013 TTBK1Q5TCY1 1321 aaPredicted RBP26.49■■□□□ 1.83
SLC39A1-211ENST00000621013 ATAD2BQ9ULI0 1458 aa26.48■■□□□ 1.83
SLC39A1-211ENST00000621013 DIEXFQ68CQ4 756 aaKnown RBP26.47■■□□□ 1.83
SLC39A1-211ENST00000621013 ACIN1Q9UKV3 1341 aaKnown RBP26.44■■□□□ 1.82
SLC39A1-211ENST00000621013 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
SLC39A1-211ENST00000621013 CLIP1P30622 1438 aa26.38■■□□□ 1.81
SLC39A1-211ENST00000621013 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
SLC39A1-211ENST00000621013 NEUROD1Q13562 356 aa26.31■■□□□ 1.8
SLC39A1-211ENST00000621013 CENPBP07199 599 aaPredicted RBP26.27■■□□□ 1.8
SLC39A1-211ENST00000621013 ZNF316A6NFI3 1004 aaPredicted RBP26.26■■□□□ 1.79
SLC39A1-211ENST00000621013 TOP2BQ02880 1626 aa26.26■■□□□ 1.79
SLC39A1-211ENST00000621013 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
SLC39A1-211ENST00000621013 BIVM-ERCC5R4GMW8 1640 aa26.18■■□□□ 1.78
SLC39A1-211ENST00000621013 ERICH3Q5RHP9 1530 aa26.12■■□□□ 1.77
SLC39A1-211ENST00000621013 HNRNPUL2Q1KMD3 747 aaKnown RBP26.11■■□□□ 1.77
SLC39A1-211ENST00000621013 APLP2Q06481 763 aa26.1■■□□□ 1.77
SLC39A1-211ENST00000621013 PRXQ9BXM0 1461 aa26.06■■□□□ 1.76
SLC39A1-211ENST00000621013 GTF3C3Q9Y5Q9 886 aa26.06■■□□□ 1.76
SLC39A1-211ENST00000621013 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
SLC39A1-211ENST00000621013 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
SLC39A1-211ENST00000621013 ARAP1Q96P48 1450 aa25.96■■□□□ 1.75
SLC39A1-211ENST00000621013 CLSPNQ9HAW4 1339 aa25.93■■□□□ 1.74
SLC39A1-211ENST00000621013 CUX1P39880 1505 aa25.9■■□□□ 1.74
SLC39A1-211ENST00000621013 KIF27Q86VH2 1401 aa25.85■■□□□ 1.73
SLC39A1-211ENST00000621013 RANGAP1P46060 587 aaPredicted RBP25.85■■□□□ 1.73
SLC39A1-211ENST00000621013 MIER1Q8N108 512 aa25.84■■□□□ 1.73
SLC39A1-211ENST00000621013 CFTRP13569 1480 aa25.81■■□□□ 1.72
SLC39A1-211ENST00000621013 DHX57Q6P158 1386 aaKnown RBP25.8■■□□□ 1.72
SLC39A1-211ENST00000621013 RRBP1Q9P2E9 1410 aaKnown RBP25.79■■□□□ 1.72
SLC39A1-211ENST00000621013 CUX2O14529 1486 aa25.73■■□□□ 1.71
SLC39A1-211ENST00000621013 KANK4Q5T7N3 995 aaPredicted RBP25.73■■□□□ 1.71
SLC39A1-211ENST00000621013 YTHDC1Q96MU7 727 aaKnown RBP25.71■■□□□ 1.71
SLC39A1-211ENST00000621013 ARHGAP35Q9NRY4 1499 aa25.68■■□□□ 1.7
SLC39A1-211ENST00000621013 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
SLC39A1-211ENST00000621013 CCNB3Q8WWL7 1395 aa25.6■■□□□ 1.69
SLC39A1-211ENST00000621013 MAP3K1Q13233 1512 aa25.57■■□□□ 1.68
SLC39A1-211ENST00000621013 IGF1RP08069 1367 aa25.53■■□□□ 1.68
SLC39A1-211ENST00000621013 TIAM1Q13009 1591 aa25.48■■□□□ 1.67
SLC39A1-211ENST00000621013 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
SLC39A1-211ENST00000621013 CARMIL1Q5VZK9 1371 aa25.41■■□□□ 1.66
SLC39A1-211ENST00000621013 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.65
SLC39A1-211ENST00000621013 LRRC9Q6ZRR7 1453 aa25.37■■□□□ 1.65
SLC39A1-211ENST00000621013 RAB3GAP2Q9H2M9 1393 aa25.36■■□□□ 1.65
SLC39A1-211ENST00000621013 MAPKBP1O60336 1514 aa25.35■■□□□ 1.65
SLC39A1-211ENST00000621013 FHAD1B1AJZ9 1412 aa25.33■■□□□ 1.65
SLC39A1-211ENST00000621013 MYT1Q01538 1121 aa25.32■■□□□ 1.64
SLC39A1-211ENST00000621013 CFAP43Q8NDM7 1665 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms