RNA–Protein interactions for RNA: ENST00000508164.5

TSPAN17-207, Transcript of tetraspanin 17, humanhuman

TSL 1 (best) BASIC

Gene TSPAN17, Length 2,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-207ENST00000508164 NISCHQ9Y2I1 1504 aa44.03■■■■■ 4.64
TSPAN17-207ENST00000508164 SHROOM4Q9ULL8 1493 aa37.96■■■■□ 3.67
TSPAN17-207ENST00000508164 SUPT5HO00267 1087 aaKnown RBP37.3■■■■□ 3.56
TSPAN17-207ENST00000508164 ZCCHC6Q5VYS8 1495 aaKnown RBP37.26■■■■□ 3.56
TSPAN17-207ENST00000508164 CCDC180Q9P1Z9 1646 aa37.21■■■■□ 3.55
TSPAN17-207ENST00000508164 DCAF8L2P0C7V8 631 aa36.75■■■■□ 3.47
TSPAN17-207ENST00000508164 CHIC1Q5VXU3 224 aa36.26■■■■□ 3.4
TSPAN17-207ENST00000508164 MYO15BQ96JP2 1530 aa36.22■■■■□ 3.39
TSPAN17-207ENST00000508164 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
TSPAN17-207ENST00000508164 HRCP23327 699 aa35.45■■■■□ 3.27
TSPAN17-207ENST00000508164 PCGF6Q9BYE7 350 aa35.43■■■■□ 3.26
TSPAN17-207ENST00000508164 LOC105371045A0A1W2PR82 267 aa35.32■■■■□ 3.25
TSPAN17-207ENST00000508164 ABCC9O60706 1549 aa35.2■■■■□ 3.22
TSPAN17-207ENST00000508164 SCRIBQ14160 1630 aa35.14■■■■□ 3.22
TSPAN17-207ENST00000508164 RSF1Q96T23 1441 aaPredicted RBP34.98■■■■□ 3.19
TSPAN17-207ENST00000508164 PPARGC1BQ86YN6 1023 aaKnown RBP34.87■■■■□ 3.17
TSPAN17-207ENST00000508164 RB1CC1Q8TDY2 1594 aa34.68■■■■□ 3.14
TSPAN17-207ENST00000508164 TRIM41Q8WV44 630 aa34.63■■■■□ 3.13
TSPAN17-207ENST00000508164 TRIM26Q12899 539 aaPredicted RBP34.57■■■■□ 3.12
TSPAN17-207ENST00000508164 FAM9AQ8IZU1 332 aaPredicted RBP34.5■■■■□ 3.11
TSPAN17-207ENST00000508164 CECR2Q9BXF3 1484 aa34.47■■■■□ 3.11
TSPAN17-207ENST00000508164 NACADO15069 1562 aa34.4■■■■□ 3.1
TSPAN17-207ENST00000508164 EHMT2Q96KQ7 1210 aa34.32■■■■□ 3.09
TSPAN17-207ENST00000508164 MROH2BQ7Z745 1585 aa34.32■■■■□ 3.08
TSPAN17-207ENST00000508164 WIZO95785 1651 aa34.17■■■■□ 3.06
TSPAN17-207ENST00000508164 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
TSPAN17-207ENST00000508164 ZEB1P37275 1124 aaPredicted RBP33.79■■■■□ 3
TSPAN17-207ENST00000508164 EIF4G1Q04637 1599 aaKnown RBP33.69■■■□□ 2.98
TSPAN17-207ENST00000508164 ABCC8Q09428 1581 aa33.52■■■□□ 2.96
TSPAN17-207ENST00000508164 TOP2AP11388 1531 aaKnown RBP33.51■■■□□ 2.96
TSPAN17-207ENST00000508164 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
TSPAN17-207ENST00000508164 CCDC88BA6NC98 1476 aa33.48■■■□□ 2.95
TSPAN17-207ENST00000508164 UNC13AQ9UPW8 1703 aa33.43■■■□□ 2.94
TSPAN17-207ENST00000508164 SMARCA2P51531 1590 aa33.39■■■□□ 2.94
TSPAN17-207ENST00000508164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.3■■■□□ 2.92
TSPAN17-207ENST00000508164 SOGA1O94964 1423 aa33.25■■■□□ 2.91
TSPAN17-207ENST00000508164 TTBK1Q5TCY1 1321 aaPredicted RBP33.24■■■□□ 2.91
TSPAN17-207ENST00000508164 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.91
TSPAN17-207ENST00000508164 CCER1Q8TC90 406 aaPredicted RBP33.15■■■□□ 2.9
TSPAN17-207ENST00000508164 CEP162Q5TB80 1403 aa33.13■■■□□ 2.89
TSPAN17-207ENST00000508164 RUSC2Q8N2Y8 1516 aa33.11■■■□□ 2.89
TSPAN17-207ENST00000508164 WRNQ14191 1432 aaPredicted RBP eCLIP33.03■■■□□ 2.88
TSPAN17-207ENST00000508164 CSRNP3Q8WYN3 585 aa33.03■■■□□ 2.88
TSPAN17-207ENST00000508164 TNIKQ9UKE5 1360 aa33■■■□□ 2.87
TSPAN17-207ENST00000508164 UBTFP17480 764 aaKnown RBP33■■■□□ 2.87
TSPAN17-207ENST00000508164 BICRAQ9NZM4 1560 aa32.99■■■□□ 2.87
TSPAN17-207ENST00000508164 EEA1Q15075 1411 aa32.89■■■□□ 2.86
TSPAN17-207ENST00000508164 SCAF1Q9H7N4 1312 aaKnown RBP32.86■■■□□ 2.85
TSPAN17-207ENST00000508164 GOLGA3Q08378 1498 aa32.77■■■□□ 2.84
TSPAN17-207ENST00000508164 PEG3Q9GZU2 1588 aa32.75■■■□□ 2.83
TSPAN17-207ENST00000508164 SYNJ1O43426 1573 aa32.7■■■□□ 2.83
TSPAN17-207ENST00000508164 PELP1Q8IZL8 1130 aaKnown RBP32.63■■■□□ 2.81
TSPAN17-207ENST00000508164 ATAD2BQ9ULI0 1458 aa32.61■■■□□ 2.81
TSPAN17-207ENST00000508164 DIEXFQ68CQ4 756 aaKnown RBP32.59■■■□□ 2.81
TSPAN17-207ENST00000508164 CEP164Q9UPV0 1460 aa32.55■■■□□ 2.8
TSPAN17-207ENST00000508164 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
TSPAN17-207ENST00000508164 KIF21BO75037 1637 aa32.48■■■□□ 2.79
TSPAN17-207ENST00000508164 CLIP1P30622 1438 aa32.46■■■□□ 2.79
TSPAN17-207ENST00000508164 RANGAP1P46060 587 aaPredicted RBP32.45■■■□□ 2.79
TSPAN17-207ENST00000508164 NEUROD1Q13562 356 aa32.44■■■□□ 2.78
TSPAN17-207ENST00000508164 HNRNPUL2Q1KMD3 747 aaKnown RBP32.43■■■□□ 2.78
TSPAN17-207ENST00000508164 ACIN1Q9UKV3 1341 aaKnown RBP32.42■■■□□ 2.78
TSPAN17-207ENST00000508164 RAPGEF2Q9Y4G8 1499 aa32.4■■■□□ 2.78
TSPAN17-207ENST00000508164 VPS8Q8N3P4 1428 aa32.31■■■□□ 2.76
TSPAN17-207ENST00000508164 ZNF316A6NFI3 1004 aaPredicted RBP32.26■■■□□ 2.76
TSPAN17-207ENST00000508164 APLP2Q06481 763 aa32.23■■■□□ 2.75
TSPAN17-207ENST00000508164 TOP2BQ02880 1626 aa32.21■■■□□ 2.75
TSPAN17-207ENST00000508164 CENPBP07199 599 aaPredicted RBP32.14■■■□□ 2.74
TSPAN17-207ENST00000508164 GTF3C3Q9Y5Q9 886 aa32.11■■■□□ 2.73
TSPAN17-207ENST00000508164 BIVM-ERCC5R4GMW8 1640 aa32.06■■■□□ 2.72
TSPAN17-207ENST00000508164 PRXQ9BXM0 1461 aa31.97■■■□□ 2.71
TSPAN17-207ENST00000508164 YTHDC1Q96MU7 727 aaKnown RBP31.95■■■□□ 2.71
TSPAN17-207ENST00000508164 CUX1P39880 1505 aa31.92■■■□□ 2.7
TSPAN17-207ENST00000508164 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
TSPAN17-207ENST00000508164 MIER1Q8N108 512 aa31.91■■■□□ 2.7
TSPAN17-207ENST00000508164 ERICH3Q5RHP9 1530 aa31.91■■■□□ 2.7
TSPAN17-207ENST00000508164 KANK4Q5T7N3 995 aaPredicted RBP31.89■■■□□ 2.7
TSPAN17-207ENST00000508164 NCAPD3P42695 1498 aa31.88■■■□□ 2.69
TSPAN17-207ENST00000508164 HMGXB3Q12766 1538 aa31.85■■■□□ 2.69
TSPAN17-207ENST00000508164 KIF27Q86VH2 1401 aa31.78■■■□□ 2.68
TSPAN17-207ENST00000508164 CFTRP13569 1480 aa31.71■■■□□ 2.67
TSPAN17-207ENST00000508164 DHX57Q6P158 1386 aaKnown RBP31.71■■■□□ 2.67
TSPAN17-207ENST00000508164 ARHGAP35Q9NRY4 1499 aa31.61■■■□□ 2.65
TSPAN17-207ENST00000508164 RRBP1Q9P2E9 1410 aaKnown RBP31.57■■■□□ 2.64
TSPAN17-207ENST00000508164 CLSPNQ9HAW4 1339 aa31.56■■■□□ 2.64
TSPAN17-207ENST00000508164 ITGAEP38570 1179 aa31.54■■■□□ 2.64
TSPAN17-207ENST00000508164 CUX2O14529 1486 aa31.5■■■□□ 2.63
TSPAN17-207ENST00000508164 CCNB3Q8WWL7 1395 aa31.47■■■□□ 2.63
TSPAN17-207ENST00000508164 IGF1RP08069 1367 aa31.47■■■□□ 2.63
TSPAN17-207ENST00000508164 PRDM2Q13029 1718 aa31.38■■■□□ 2.61
TSPAN17-207ENST00000508164 CADPSQ9ULU8 1353 aa31.35■■■□□ 2.61
TSPAN17-207ENST00000508164 CARMIL1Q5VZK9 1371 aa31.34■■■□□ 2.61
TSPAN17-207ENST00000508164 FGD5Q6ZNL6 1462 aa31.33■■■□□ 2.61
TSPAN17-207ENST00000508164 MYT1Q01538 1121 aa31.3■■■□□ 2.6
TSPAN17-207ENST00000508164 TIAM1Q13009 1591 aa31.26■■■□□ 2.59
TSPAN17-207ENST00000508164 RAB3GAP2Q9H2M9 1393 aa31.26■■■□□ 2.59
TSPAN17-207ENST00000508164 P3H3Q8IVL6 736 aa31.25■■■□□ 2.59
TSPAN17-207ENST00000508164 PHLDB1Q86UU1 1377 aa31.16■■■□□ 2.58
TSPAN17-207ENST00000508164 LRRC9Q6ZRR7 1453 aa31.16■■■□□ 2.58
TSPAN17-207ENST00000508164 ATP1B4Q9UN42 357 aaPredicted RBP31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms