Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.171e-6■■■■□ 23.2
MATR3P43243 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.34□□□□□ -1.396e-7■■■■□ 23.2
MATR3P43243 RBM33-209ENST00000440108 1027 ntTSL 519.41■□□□□ 0.79e-7■■■■□ 23.2
MATR3P43243 RBM33-202ENST00000307403 4360 ntTSL 212.12□□□□□ -0.479e-7■■■■□ 23.2
MATR3P43243 CPED1-207ENST00000466055 543 ntTSL 36.15□□□□□ -1.421e-6■■■■□ 23.2
MATR3P43243 TTC19-208ENST00000497842 1360 ntTSL 531.18■■■□□ 2.582e-6■■■■□ 23.2
MATR3P43243 TTC19-206ENST00000475723 2591 ntTSL 223.59■■□□□ 1.372e-6■■■■□ 23.2
MATR3P43243 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.972e-6■■■■□ 23.2
MATR3P43243 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 05e-7■■■■□ 23.2
MATR3P43243 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.075e-7■■■■□ 23.2
MATR3P43243 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.085e-7■■■■□ 23.2
MATR3P43243 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.485e-7■■■■□ 23.2
MATR3P43243 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.685e-7■■■■□ 23.2
MATR3P43243 SEC31A-213ENST00000503937 1564 ntTSL 1 (best)8.51□□□□□ -1.055e-7■■■■□ 23.2
MATR3P43243 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.52□□□□□ -1.215e-7■■■■□ 23.2
MATR3P43243 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.4□□□□□ -1.395e-7■■■■□ 23.2
MATR3P43243 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.04□□□□□ -1.445e-7■■■■□ 23.2
MATR3P43243 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.86□□□□□ -1.475e-7■■■■□ 23.2
MATR3P43243 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.54□□□□□ -1.525e-7■■■■□ 23.2
MATR3P43243 SEC31A-240ENST00000515062 597 ntTSL 35.31□□□□□ -1.565e-7■■■■□ 23.2
MATR3P43243 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.87□□□□□ -1.635e-7■■■■□ 23.2
MATR3P43243 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.645e-7■■■■□ 23.2
MATR3P43243 SEC31A-232ENST00000511338 657 ntTSL 54.48□□□□□ -1.695e-7■■■■□ 23.2
MATR3P43243 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.36□□□□□ -1.715e-7■■■■□ 23.2
MATR3P43243 KDM6A-207ENST00000475233 612 ntTSL 519.44■□□□□ 0.71e-6■■■■□ 23.2
MATR3P43243 SMOC1-204ENST00000555917 570 ntTSL 414.41□□□□□ -0.11e-6■■■■□ 23.2
MATR3P43243 KIFC3-209ENST00000562311 777 ntTSL 527.58■■■□□ 2.012e-6■■■■□ 23.2
MATR3P43243 KIFC3-223ENST00000565684 623 ntTSL 524.7■■□□□ 1.542e-6■■■■□ 23.2
MATR3P43243 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.912e-6■■■■□ 23.2
MATR3P43243 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.722e-6■■■■□ 23.2
MATR3P43243 KIFC3-228ENST00000566975 580 ntTSL 418.16■□□□□ 0.52e-6■■■■□ 23.2
MATR3P43243 KIFC3-208ENST00000561524 577 ntTSL 418.16■□□□□ 0.52e-6■■■■□ 23.2
MATR3P43243 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.71■□□□□ 0.432e-6■■■■□ 23.2
MATR3P43243 KIFC3-210ENST00000562503 737 ntTSL 417.5■□□□□ 0.392e-6■■■■□ 23.2
MATR3P43243 KIFC3-226ENST00000566648 651 ntTSL 316.87■□□□□ 0.292e-6■■■■□ 23.2
MATR3P43243 KIFC3-232ENST00000569112 564 ntTSL 416.35■□□□□ 0.212e-6■■■■□ 23.2
MATR3P43243 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.03■□□□□ 0.162e-6■■■■□ 23.2
MATR3P43243 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.97■□□□□ 0.152e-6■■■■□ 23.2
MATR3P43243 KIFC3-230ENST00000567204 516 ntTSL 415.66■□□□□ 0.12e-6■■■■□ 23.2
MATR3P43243 KIFC3-212ENST00000562984 551 ntTSL 415.24■□□□□ 0.032e-6■■■■□ 23.2
MATR3P43243 KIFC3-222ENST00000565481 788 ntTSL 512.67□□□□□ -0.382e-6■■■■□ 23.2
MATR3P43243 EHMT1-228ENST00000636027 3114 ntTSL 513.42□□□□□ -0.264e-7■■■■□ 23.2
MATR3P43243 AP005263.1-202ENST00000578850 198 ntTSL 221.12■□□□□ 0.971e-6■■■■□ 23.2
MATR3P43243 ANKRD12-204ENST00000540578 1338 ntTSL 1 (best)14.69□□□□□ -0.061e-6■■■■□ 23.2
MATR3P43243 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.171e-6■■■■□ 23.2
MATR3P43243 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.271e-6■■■■□ 23.2
MATR3P43243 HDLBP-241ENST00000487169 4339 ntTSL 215.48■□□□□ 0.071e-7■■■■□ 23.2
MATR3P43243 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC14.79□□□□□ -0.041e-7■■■■□ 23.2
MATR3P43243 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.281e-7■■■■□ 23.2
MATR3P43243 HDLBP-215ENST00000427487 924 ntTSL 513.12□□□□□ -0.311e-7■■■■□ 23.2
MATR3P43243 HDLBP-202ENST00000373292 3297 ntTSL 512.04□□□□□ -0.481e-7■■■■□ 23.2
MATR3P43243 HDLBP-225ENST00000452931 801 ntTSL 59.72□□□□□ -0.851e-7■■■■□ 23.2
MATR3P43243 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.945e-6■■■■□ 23.2
MATR3P43243 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.888e-7■■■■□ 23.2
MATR3P43243 FAM168A-205ENST00000632101 473 ntTSL 216.01■□□□□ 0.152e-7■■■■□ 23.2
MATR3P43243 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.9□□□□□ -0.022e-7■■■■□ 23.2
MATR3P43243 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.072e-7■■■■□ 23.2
MATR3P43243 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC10.15□□□□□ -0.782e-7■■■■□ 23.2
MATR3P43243 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.35□□□□□ -1.078e-7■■■■□ 23.2
MATR3P43243 FRAS1-203ENST00000508900 2169 ntTSL 1 (best)14.15□□□□□ -0.152e-6■■■■□ 23.2
MATR3P43243 FRAS1-202ENST00000502446 2217 ntTSL 513.87□□□□□ -0.192e-6■■■■□ 23.2
MATR3P43243 TBCD-222ENST00000576677 1926 ntTSL 1 (best)23.75■■□□□ 1.391e-8■■■■□ 23.2
MATR3P43243 TBCD-212ENST00000573364 626 ntTSL 317.54■□□□□ 0.41e-8■■■■□ 23.2
MATR3P43243 TBCD-221ENST00000576603 765 ntTSL 317.04■□□□□ 0.321e-8■■■■□ 23.2
MATR3P43243 TBCD-218ENST00000575132 707 ntTSL 516.22■□□□□ 0.191e-8■■■■□ 23.2
MATR3P43243 TBCD-226ENST00000577051 979 ntTSL 515.55■□□□□ 0.081e-8■■■■□ 23.2
MATR3P43243 PAPSS1-201ENST00000265174 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.313e-7■■■■□ 23.2
MATR3P43243 MAGI3-206ENST00000486456 897 ntTSL 521.94■■□□□ 1.12e-6■■■■□ 23.2
MATR3P43243 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.97■□□□□ 0.952e-6■■■■□ 23.2
MATR3P43243 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.822e-6■■■■□ 23.2
MATR3P43243 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.27■□□□□ 0.522e-6■■■■□ 23.2
MATR3P43243 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.182e-6■■■■□ 23.2
MATR3P43243 ZNF518A-207ENST00000539666 485 ntTSL 46.29□□□□□ -1.43e-7■■■■□ 23.1
MATR3P43243 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.782e-13■■■■□ 23.1
MATR3P43243 FOXJ3-207ENST00000445886 1326 ntTSL 1 (best)25.9■■□□□ 1.742e-6■■■■□ 23.1
MATR3P43243 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.781e-6■■■■□ 23.1
MATR3P43243 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.251e-6■■■■□ 23.1
MATR3P43243 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.331e-6■■■■□ 23.1
MATR3P43243 FASTKD2-206ENST00000487777 4999 ntTSL 52.82□□□□□ -1.961e-6■■■■□ 23.1
MATR3P43243 PTPRA-208ENST00000455631 1107 ntTSL 525.25■■□□□ 1.632e-7■■■■□ 23.1
MATR3P43243 PTPRA-207ENST00000431048 707 ntTSL 523.94■■□□□ 1.422e-7■■■■□ 23.1
MATR3P43243 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.29■□□□□ 0.683e-7■■■■□ 23.1
MATR3P43243 PTPRA-206ENST00000430705 733 ntTSL 517.71■□□□□ 0.432e-7■■■■□ 23.1
MATR3P43243 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.263e-7■■■■□ 23.1
MATR3P43243 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.673e-7■■■■□ 23.1
MATR3P43243 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC10.22□□□□□ -0.773e-7■■■■□ 23.1
MATR3P43243 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.8□□□□□ -0.041e-6■■■■□ 23.1
MATR3P43243 MAGI1-203ENST00000460329 3694 ntTSL 515.53■□□□□ 0.081e-7■■■■□ 23.1
MATR3P43243 MAGI1-204ENST00000463103 4193 ntTSL 514.84□□□□□ -0.031e-7■■■■□ 23.1
MATR3P43243 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC9.89□□□□□ -0.833e-7■■■■□ 23.1
MATR3P43243 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.42□□□□□ -1.063e-7■■■■□ 23.1
MATR3P43243 ACTN1-220ENST00000556433 1259 ntTSL 324.69■■□□□ 1.541e-6■■■■□ 23.1
MATR3P43243 ACTN1-215ENST00000555616 919 ntTSL 310.44□□□□□ -0.741e-6■■■■□ 23.1
MATR3P43243 COG5-210ENST00000605888 576 ntAPPRIS ALT2 TSL 215.28■□□□□ 0.049e-8■■■■□ 23.1
MATR3P43243 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC13.96□□□□□ -0.179e-8■■■■□ 23.1
MATR3P43243 HERC2P3-205ENST00000428453 4383 ntTSL 212.12□□□□□ -0.479e-8■■■■□ 23.1
MATR3P43243 HERC2P3-209ENST00000437318 4161 ntTSL 1 (best)9.46□□□□□ -0.899e-8■■■■□ 23.1
MATR3P43243 UBAC2-204ENST00000457666 627 ntTSL 319.91■□□□□ 0.782e-8■■■■□ 23.1
MATR3P43243 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.79■□□□□ 0.443e-7■■■■□ 23.1
MATR3P43243 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC14.15□□□□□ -0.143e-7■■■■□ 23.1
Retrieved 100 of 16,209 protein–RNA pairs in 100.1 ms