RNA–Protein interactions for RNA: ENST00000261647.9

TTC19-201, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC19, Length 3,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-201ENST00000261647 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
TTC19-201ENST00000261647 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
TTC19-201ENST00000261647 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
TTC19-201ENST00000261647 HRCP23327 699 aa31.58■■■□□ 2.65
TTC19-201ENST00000261647 MYO15BQ96JP2 1530 aa31.53■■■□□ 2.64
TTC19-201ENST00000261647 CHIC1Q5VXU3 224 aa31.41■■■□□ 2.62
TTC19-201ENST00000261647 PCGF6Q9BYE7 350 aa31.35■■■□□ 2.61
TTC19-201ENST00000261647 PPARGC1BQ86YN6 1023 aaKnown RBP31.23■■■□□ 2.59
TTC19-201ENST00000261647 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
TTC19-201ENST00000261647 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
TTC19-201ENST00000261647 LOC105371045A0A1W2PR82 267 aa30.8■■■□□ 2.52
TTC19-201ENST00000261647 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
TTC19-201ENST00000261647 DCAF1Q9Y4B6 1507 aa30.46■■■□□ 2.47
TTC19-201ENST00000261647 TRIM26Q12899 539 aaPredicted RBP30.27■■■□□ 2.44
TTC19-201ENST00000261647 FAM9AQ8IZU1 332 aaPredicted RBP29.85■■■□□ 2.37
TTC19-201ENST00000261647 EHMT2Q96KQ7 1210 aa29.85■■■□□ 2.37
TTC19-201ENST00000261647 SCAF1Q9H7N4 1312 aaKnown RBP29.71■■■□□ 2.35
TTC19-201ENST00000261647 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
TTC19-201ENST00000261647 ZEB1P37275 1124 aaPredicted RBP29.7■■■□□ 2.35
TTC19-201ENST00000261647 PELP1Q8IZL8 1130 aaKnown RBP29.67■■■□□ 2.34
TTC19-201ENST00000261647 RSF1Q96T23 1441 aaPredicted RBP29.52■■■□□ 2.32
TTC19-201ENST00000261647 ABCC9O60706 1549 aa29.51■■■□□ 2.32
TTC19-201ENST00000261647 RB1CC1Q8TDY2 1594 aa29.34■■■□□ 2.29
TTC19-201ENST00000261647 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
TTC19-201ENST00000261647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.25■■■□□ 2.27
TTC19-201ENST00000261647 NEUROD1Q13562 356 aa29.1■■■□□ 2.25
TTC19-201ENST00000261647 CCER1Q8TC90 406 aaPredicted RBP29.07■■■□□ 2.24
TTC19-201ENST00000261647 ACIN1Q9UKV3 1341 aaKnown RBP29.04■■■□□ 2.24
TTC19-201ENST00000261647 TTBK1Q5TCY1 1321 aaPredicted RBP29■■■□□ 2.23
TTC19-201ENST00000261647 CECR2Q9BXF3 1484 aa28.94■■■□□ 2.22
TTC19-201ENST00000261647 GTF3C3Q9Y5Q9 886 aa28.86■■■□□ 2.21
TTC19-201ENST00000261647 DIEXFQ68CQ4 756 aaKnown RBP28.85■■■□□ 2.21
TTC19-201ENST00000261647 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
TTC19-201ENST00000261647 WIZO95785 1651 aa28.68■■■□□ 2.18
TTC19-201ENST00000261647 CENPBP07199 599 aaPredicted RBP28.62■■■□□ 2.17
TTC19-201ENST00000261647 YTHDC1Q96MU7 727 aaKnown RBP28.49■■■□□ 2.15
TTC19-201ENST00000261647 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
TTC19-201ENST00000261647 CCDC88BA6NC98 1476 aa28.41■■■□□ 2.14
TTC19-201ENST00000261647 CEP162Q5TB80 1403 aa28.38■■■□□ 2.13
TTC19-201ENST00000261647 ZNF316A6NFI3 1004 aaPredicted RBP28.36■■■□□ 2.13
TTC19-201ENST00000261647 EIF4G1Q04637 1599 aaKnown RBP28.35■■■□□ 2.13
TTC19-201ENST00000261647 SOGA1O94964 1423 aa28.33■■■□□ 2.13
TTC19-201ENST00000261647 MYT1Q01538 1121 aa28.33■■■□□ 2.13
TTC19-201ENST00000261647 WRNQ14191 1432 aaPredicted RBP eCLIP28.31■■■□□ 2.12
TTC19-201ENST00000261647 BAZ1AQ9NRL2 1556 aaPredicted RBP28.29■■■□□ 2.12
TTC19-201ENST00000261647 UBTFP17480 764 aaKnown RBP28.28■■■□□ 2.12
TTC19-201ENST00000261647 MIER1Q8N108 512 aa28.24■■■□□ 2.11
TTC19-201ENST00000261647 NACADO15069 1562 aa28.23■■■□□ 2.11
TTC19-201ENST00000261647 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
TTC19-201ENST00000261647 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
TTC19-201ENST00000261647 TNIKQ9UKE5 1360 aa28.16■■■□□ 2.1
TTC19-201ENST00000261647 CSRNP3Q8WYN3 585 aa28.15■■■□□ 2.1
TTC19-201ENST00000261647 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
TTC19-201ENST00000261647 SMARCA2P51531 1590 aa27.97■■■□□ 2.07
TTC19-201ENST00000261647 RANGAP1P46060 587 aaPredicted RBP27.91■■■□□ 2.06
TTC19-201ENST00000261647 GOLGA3Q08378 1498 aa27.85■■■□□ 2.05
TTC19-201ENST00000261647 SMARCA4P51532 1647 aa27.83■■■□□ 2.04
TTC19-201ENST00000261647 EEA1Q15075 1411 aa27.81■■■□□ 2.04
TTC19-201ENST00000261647 CLIP1P30622 1438 aa27.7■■■□□ 2.02
TTC19-201ENST00000261647 APLP2Q06481 763 aa27.65■■■□□ 2.02
TTC19-201ENST00000261647 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
TTC19-201ENST00000261647 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
TTC19-201ENST00000261647 VPS8Q8N3P4 1428 aa27.58■■■□□ 2
TTC19-201ENST00000261647 SUPT16HQ9Y5B9 1047 aaKnown RBP27.54■■■□□ 2
TTC19-201ENST00000261647 SYNJ1O43426 1573 aa27.53■■■□□ 2
TTC19-201ENST00000261647 RAPGEF2Q9Y4G8 1499 aa27.52■■■□□ 2
TTC19-201ENST00000261647 DHX57Q6P158 1386 aaKnown RBP27.44■■□□□ 1.98
TTC19-201ENST00000261647 KIF21BO75037 1637 aa27.44■■□□□ 1.98
TTC19-201ENST00000261647 UNC13AQ9UPW8 1703 aa27.42■■□□□ 1.98
TTC19-201ENST00000261647 KANK4Q5T7N3 995 aaPredicted RBP27.39■■□□□ 1.97
TTC19-201ENST00000261647 KCNH8Q96L42 1107 aa27.35■■□□□ 1.97
TTC19-201ENST00000261647 TSHZ2Q9NRE2 1034 aa27.3■■□□□ 1.96
TTC19-201ENST00000261647 ITGAEP38570 1179 aa27.27■■□□□ 1.96
TTC19-201ENST00000261647 BAZ1BQ9UIG0 1483 aaKnown RBP27.26■■□□□ 1.95
TTC19-201ENST00000261647 CLSPNQ9HAW4 1339 aa27.22■■□□□ 1.95
TTC19-201ENST00000261647 BCANQ96GW7 911 aa27.2■■□□□ 1.95
TTC19-201ENST00000261647 ARAP1Q96P48 1450 aa27.14■■□□□ 1.94
TTC19-201ENST00000261647 ANP32EQ9BTT0 268 aa27.1■■□□□ 1.93
TTC19-201ENST00000261647 BICRAQ9NZM4 1560 aa27.1■■□□□ 1.93
TTC19-201ENST00000261647 PEG3Q9GZU2 1588 aa27.05■■□□□ 1.92
TTC19-201ENST00000261647 ATAD2BQ9ULI0 1458 aa27.04■■□□□ 1.92
TTC19-201ENST00000261647 RRBP1Q9P2E9 1410 aaKnown RBP26.99■■□□□ 1.91
TTC19-201ENST00000261647 DDX10Q13206 875 aaKnown RBP26.98■■□□□ 1.91
TTC19-201ENST00000261647 FKBP8Q14318 412 aa26.98■■□□□ 1.91
TTC19-201ENST00000261647 PRXQ9BXM0 1461 aa26.97■■□□□ 1.91
TTC19-201ENST00000261647 CCNB3Q8WWL7 1395 aa26.96■■□□□ 1.91
TTC19-201ENST00000261647 TOP2BQ02880 1626 aa26.95■■□□□ 1.9
TTC19-201ENST00000261647 HIRIP3Q9BW71 556 aaPredicted RBP26.93■■□□□ 1.9
TTC19-201ENST00000261647 SIN3AQ96ST3 1273 aa26.92■■□□□ 1.9
TTC19-201ENST00000261647 BCL11AQ9H165 835 aa26.92■■□□□ 1.9
TTC19-201ENST00000261647 RAB3GAP2Q9H2M9 1393 aa26.91■■□□□ 1.9
TTC19-201ENST00000261647 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
TTC19-201ENST00000261647 CUX2O14529 1486 aa26.84■■□□□ 1.89
TTC19-201ENST00000261647 MAPKBP1O60336 1514 aa26.83■■□□□ 1.89
TTC19-201ENST00000261647 TRIM52Q96A61 297 aa26.81■■□□□ 1.88
TTC19-201ENST00000261647 ARHGAP35Q9NRY4 1499 aa26.8■■□□□ 1.88
TTC19-201ENST00000261647 WDR97A6NE52 1622 aa26.75■■□□□ 1.87
TTC19-201ENST00000261647 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
TTC19-201ENST00000261647 FAM50AQ14320 339 aaKnown RBP26.72■■□□□ 1.87
TTC19-201ENST00000261647 CUX1P39880 1505 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms