RNA–Protein interactions for RNA: ENST00000379655.8

KIFC3-201, Transcript of kinesin family member C3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIFC3, Length 3,427 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-201ENST00000379655 NISCHQ9Y2I1 1504 aa36.42■■■■□ 3.42
KIFC3-201ENST00000379655 SHROOM4Q9ULL8 1493 aa32.89■■■□□ 2.86
KIFC3-201ENST00000379655 DCAF8L2P0C7V8 631 aa32.44■■■□□ 2.78
KIFC3-201ENST00000379655 SUPT5HO00267 1087 aaKnown RBP32.38■■■□□ 2.77
KIFC3-201ENST00000379655 CHIC1Q5VXU3 224 aa30.68■■■□□ 2.5
KIFC3-201ENST00000379655 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
KIFC3-201ENST00000379655 EHMT2Q96KQ7 1210 aa30.6■■■□□ 2.49
KIFC3-201ENST00000379655 PCGF6Q9BYE7 350 aa30.52■■■□□ 2.48
KIFC3-201ENST00000379655 LOC105371045A0A1W2PR82 267 aa30.44■■■□□ 2.46
KIFC3-201ENST00000379655 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
KIFC3-201ENST00000379655 FAM9AQ8IZU1 332 aaPredicted RBP30.21■■■□□ 2.43
KIFC3-201ENST00000379655 CCDC180Q9P1Z9 1646 aa30.13■■■□□ 2.41
KIFC3-201ENST00000379655 PPARGC1BQ86YN6 1023 aaKnown RBP30.06■■■□□ 2.4
KIFC3-201ENST00000379655 HRCP23327 699 aa29.84■■■□□ 2.37
KIFC3-201ENST00000379655 TRIM41Q8WV44 630 aa29.67■■■□□ 2.34
KIFC3-201ENST00000379655 ABCC9O60706 1549 aa29.57■■■□□ 2.32
KIFC3-201ENST00000379655 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
KIFC3-201ENST00000379655 TTBK1Q5TCY1 1321 aaPredicted RBP29.48■■■□□ 2.31
KIFC3-201ENST00000379655 TRIM26Q12899 539 aaPredicted RBP29.19■■■□□ 2.26
KIFC3-201ENST00000379655 RSF1Q96T23 1441 aaPredicted RBP29.18■■■□□ 2.26
KIFC3-201ENST00000379655 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
KIFC3-201ENST00000379655 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
KIFC3-201ENST00000379655 RB1CC1Q8TDY2 1594 aa28.91■■■□□ 2.22
KIFC3-201ENST00000379655 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
KIFC3-201ENST00000379655 RANGAP1P46060 587 aaPredicted RBP28.79■■■□□ 2.2
KIFC3-201ENST00000379655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.72■■■□□ 2.19
KIFC3-201ENST00000379655 MROH2BQ7Z745 1585 aa28.65■■■□□ 2.18
KIFC3-201ENST00000379655 CCER1Q8TC90 406 aaPredicted RBP28.55■■■□□ 2.16
KIFC3-201ENST00000379655 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
KIFC3-201ENST00000379655 WIZO95785 1651 aa28.47■■■□□ 2.15
KIFC3-201ENST00000379655 ZEB1P37275 1124 aaPredicted RBP28.3■■■□□ 2.12
KIFC3-201ENST00000379655 NACADO15069 1562 aa28.24■■■□□ 2.11
KIFC3-201ENST00000379655 ABCC8Q09428 1581 aa28.22■■■□□ 2.11
KIFC3-201ENST00000379655 HNRNPUL2Q1KMD3 747 aaKnown RBP28.13■■■□□ 2.09
KIFC3-201ENST00000379655 CCDC88BA6NC98 1476 aa28.09■■■□□ 2.09
KIFC3-201ENST00000379655 SOGA1O94964 1423 aa28.08■■■□□ 2.08
KIFC3-201ENST00000379655 CSRNP3Q8WYN3 585 aa27.99■■■□□ 2.07
KIFC3-201ENST00000379655 RUSC2Q8N2Y8 1516 aa27.95■■■□□ 2.07
KIFC3-201ENST00000379655 YTHDC1Q96MU7 727 aaKnown RBP27.92■■■□□ 2.06
KIFC3-201ENST00000379655 BAZ1AQ9NRL2 1556 aaPredicted RBP27.89■■■□□ 2.05
KIFC3-201ENST00000379655 SCAF1Q9H7N4 1312 aaKnown RBP27.84■■■□□ 2.05
KIFC3-201ENST00000379655 CEP162Q5TB80 1403 aa27.81■■■□□ 2.04
KIFC3-201ENST00000379655 APLP2Q06481 763 aa27.81■■■□□ 2.04
KIFC3-201ENST00000379655 DIEXFQ68CQ4 756 aaKnown RBP27.78■■■□□ 2.04
KIFC3-201ENST00000379655 ITGAEP38570 1179 aa27.67■■■□□ 2.02
KIFC3-201ENST00000379655 SMARCA4P51532 1647 aa27.63■■■□□ 2.01
KIFC3-201ENST00000379655 NEUROD1Q13562 356 aa27.62■■■□□ 2.01
KIFC3-201ENST00000379655 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
KIFC3-201ENST00000379655 SMARCA2P51531 1590 aa27.58■■■□□ 2.01
KIFC3-201ENST00000379655 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
KIFC3-201ENST00000379655 ATP1B4Q9UN42 357 aaPredicted RBP27.49■■□□□ 1.99
KIFC3-201ENST00000379655 TNIKQ9UKE5 1360 aa27.47■■□□□ 1.99
KIFC3-201ENST00000379655 GTF3C3Q9Y5Q9 886 aa27.46■■□□□ 1.99
KIFC3-201ENST00000379655 ACIN1Q9UKV3 1341 aaKnown RBP27.38■■□□□ 1.97
KIFC3-201ENST00000379655 UNC13AQ9UPW8 1703 aa27.35■■□□□ 1.97
KIFC3-201ENST00000379655 CLIP1P30622 1438 aa27.35■■□□□ 1.97
KIFC3-201ENST00000379655 GOLGA3Q08378 1498 aa27.33■■□□□ 1.97
KIFC3-201ENST00000379655 ZNF316A6NFI3 1004 aaPredicted RBP27.32■■□□□ 1.96
KIFC3-201ENST00000379655 CENPBP07199 599 aaPredicted RBP27.31■■□□□ 1.96
KIFC3-201ENST00000379655 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
KIFC3-201ENST00000379655 BAZ1BQ9UIG0 1483 aaKnown RBP27.28■■□□□ 1.96
KIFC3-201ENST00000379655 P3H3Q8IVL6 736 aa27.27■■□□□ 1.96
KIFC3-201ENST00000379655 MIER1Q8N108 512 aa27.25■■□□□ 1.95
KIFC3-201ENST00000379655 RAPGEF2Q9Y4G8 1499 aa27.22■■□□□ 1.95
KIFC3-201ENST00000379655 BICRAQ9NZM4 1560 aa27.19■■□□□ 1.94
KIFC3-201ENST00000379655 KANK4Q5T7N3 995 aaPredicted RBP27.18■■□□□ 1.94
KIFC3-201ENST00000379655 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
KIFC3-201ENST00000379655 ATAD2BQ9ULI0 1458 aa27.17■■□□□ 1.94
KIFC3-201ENST00000379655 EEA1Q15075 1411 aa27.11■■□□□ 1.93
KIFC3-201ENST00000379655 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
KIFC3-201ENST00000379655 FAM50AQ14320 339 aaKnown RBP26.95■■□□□ 1.91
KIFC3-201ENST00000379655 VPS8Q8N3P4 1428 aa26.94■■□□□ 1.9
KIFC3-201ENST00000379655 HIRIP3Q9BW71 556 aaPredicted RBP26.87■■□□□ 1.89
KIFC3-201ENST00000379655 ARID3CA6NKF2 412 aa26.77■■□□□ 1.88
KIFC3-201ENST00000379655 KIF21BO75037 1637 aa26.74■■□□□ 1.87
KIFC3-201ENST00000379655 SIN3AQ96ST3 1273 aa26.67■■□□□ 1.86
KIFC3-201ENST00000379655 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
KIFC3-201ENST00000379655 PELP1Q8IZL8 1130 aaKnown RBP26.63■■□□□ 1.85
KIFC3-201ENST00000379655 ARAP1Q96P48 1450 aa26.63■■□□□ 1.85
KIFC3-201ENST00000379655 CUX2O14529 1486 aa26.62■■□□□ 1.85
KIFC3-201ENST00000379655 KCNH8Q96L42 1107 aa26.62■■□□□ 1.85
KIFC3-201ENST00000379655 BCANQ96GW7 911 aa26.57■■□□□ 1.84
KIFC3-201ENST00000379655 DHX57Q6P158 1386 aaKnown RBP26.57■■□□□ 1.84
KIFC3-201ENST00000379655 CUX1P39880 1505 aa26.55■■□□□ 1.84
KIFC3-201ENST00000379655 DDX10Q13206 875 aaKnown RBP26.53■■□□□ 1.84
KIFC3-201ENST00000379655 PEG3Q9GZU2 1588 aa26.53■■□□□ 1.84
KIFC3-201ENST00000379655 TOP2BQ02880 1626 aa26.49■■□□□ 1.83
KIFC3-201ENST00000379655 CCNB3Q8WWL7 1395 aa26.47■■□□□ 1.83
KIFC3-201ENST00000379655 CNGB1Q14028 1251 aaPredicted RBP26.46■■□□□ 1.83
KIFC3-201ENST00000379655 CARMIL1Q5VZK9 1371 aa26.45■■□□□ 1.83
KIFC3-201ENST00000379655 PRXQ9BXM0 1461 aa26.44■■□□□ 1.82
KIFC3-201ENST00000379655 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
KIFC3-201ENST00000379655 IGF1RP08069 1367 aa26.41■■□□□ 1.82
KIFC3-201ENST00000379655 RAB3GAP2Q9H2M9 1393 aa26.38■■□□□ 1.81
KIFC3-201ENST00000379655 CHIC2Q9UKJ5 165 aa26.38■■□□□ 1.81
KIFC3-201ENST00000379655 ARHGAP35Q9NRY4 1499 aa26.37■■□□□ 1.81
KIFC3-201ENST00000379655 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
KIFC3-201ENST00000379655 RAD54L2Q9Y4B4 1467 aa26.31■■□□□ 1.8
KIFC3-201ENST00000379655 FHOD3Q2V2M9 1422 aa26.31■■□□□ 1.8
KIFC3-201ENST00000379655 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms