RNA–Protein interactions for RNA: ENST00000367435.3

CDC73-201, Transcript of cell division cycle 73, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC73, Length 4,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC73-201ENST00000367435 DCAF8L2P0C7V8 631 aa31.08■■■□□ 2.57
CDC73-201ENST00000367435 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
CDC73-201ENST00000367435 SUPT5HO00267 1087 aaKnown RBP28.96■■■□□ 2.23
CDC73-201ENST00000367435 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
CDC73-201ENST00000367435 FAM9AQ8IZU1 332 aaPredicted RBP28.02■■■□□ 2.08
CDC73-201ENST00000367435 APLP2Q06481 763 aa27.93■■■□□ 2.06
CDC73-201ENST00000367435 EHMT2Q96KQ7 1210 aa27.87■■■□□ 2.05
CDC73-201ENST00000367435 PELP1Q8IZL8 1130 aaKnown RBP27.23■■□□□ 1.95
CDC73-201ENST00000367435 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
CDC73-201ENST00000367435 RANGAP1P46060 587 aaPredicted RBP26.94■■□□□ 1.9
CDC73-201ENST00000367435 ATP1B4Q9UN42 357 aaPredicted RBP26.94■■□□□ 1.9
CDC73-201ENST00000367435 TTBK1Q5TCY1 1321 aaPredicted RBP26.88■■□□□ 1.89
CDC73-201ENST00000367435 UBTFP17480 764 aaKnown RBP26.77■■□□□ 1.88
CDC73-201ENST00000367435 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
CDC73-201ENST00000367435 CCER1Q8TC90 406 aaPredicted RBP26.38■■□□□ 1.81
CDC73-201ENST00000367435 ZEB1P37275 1124 aaPredicted RBP26.38■■□□□ 1.81
CDC73-201ENST00000367435 MYT1LQ9UL68 1186 aa26.22■■□□□ 1.79
CDC73-201ENST00000367435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.2■■□□□ 1.78
CDC73-201ENST00000367435 HNRNPUL2Q1KMD3 747 aaKnown RBP26.2■■□□□ 1.78
CDC73-201ENST00000367435 CENPBP07199 599 aaPredicted RBP26.13■■□□□ 1.77
CDC73-201ENST00000367435 ERICH6Q7L0X2 663 aa25.86■■□□□ 1.73
CDC73-201ENST00000367435 NEFLP07196 543 aa25.85■■□□□ 1.73
CDC73-201ENST00000367435 ABCC9O60706 1549 aa25.75■■□□□ 1.71
CDC73-201ENST00000367435 ITGAEP38570 1179 aa25.74■■□□□ 1.71
CDC73-201ENST00000367435 PPARGC1BQ86YN6 1023 aaKnown RBP25.71■■□□□ 1.71
CDC73-201ENST00000367435 PABPN1Q86U42 306 aaKnown RBP eCLIP25.67■■□□□ 1.7
CDC73-201ENST00000367435 TRIM26Q12899 539 aaPredicted RBP25.57■■□□□ 1.68
CDC73-201ENST00000367435 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
CDC73-201ENST00000367435 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
CDC73-201ENST00000367435 YTHDC1Q96MU7 727 aaKnown RBP25.39■■□□□ 1.66
CDC73-201ENST00000367435 SLC4A1APQ9BWU0 796 aaKnown RBP25.3■■□□□ 1.64
CDC73-201ENST00000367435 LOC105371045A0A1W2PR82 267 aa25.28■■□□□ 1.64
CDC73-201ENST00000367435 FBLN2P98095 1184 aa25.28■■□□□ 1.64
CDC73-201ENST00000367435 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.62
CDC73-201ENST00000367435 TRIM52Q96A61 297 aa25.13■■□□□ 1.61
CDC73-201ENST00000367435 DAXXQ9UER7 740 aaPredicted RBP25.13■■□□□ 1.61
CDC73-201ENST00000367435 CNGB1Q14028 1251 aaPredicted RBP25.11■■□□□ 1.61
CDC73-201ENST00000367435 HRCP23327 699 aa24.96■■□□□ 1.59
CDC73-201ENST00000367435 CDK11AQ9UQ88 783 aaPredicted RBP24.84■■□□□ 1.57
CDC73-201ENST00000367435 BCANQ96GW7 911 aa24.76■■□□□ 1.55
CDC73-201ENST00000367435 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
CDC73-201ENST00000367435 ZNF326Q5BKZ1 582 aaKnown RBP24.75■■□□□ 1.55
CDC73-201ENST00000367435 NEUROD1Q13562 356 aa24.74■■□□□ 1.55
CDC73-201ENST00000367435 NPM1P06748 294 aaKnown RBP eCLIP24.73■■□□□ 1.55
CDC73-201ENST00000367435 CLSPNQ9HAW4 1339 aa24.73■■□□□ 1.55
CDC73-201ENST00000367435 CSRNP3Q8WYN3 585 aa24.7■■□□□ 1.54
CDC73-201ENST00000367435 P3H3Q8IVL6 736 aa24.66■■□□□ 1.54
CDC73-201ENST00000367435 ARID3CA6NKF2 412 aa24.62■■□□□ 1.53
CDC73-201ENST00000367435 NEFMP07197 916 aa24.6■■□□□ 1.53
CDC73-201ENST00000367435 ZNF777Q9ULD5 760 aaPredicted RBP24.6■■□□□ 1.53
CDC73-201ENST00000367435 ZBTB47Q9UFB7 747 aaPredicted RBP24.56■■□□□ 1.52
CDC73-201ENST00000367435 SCRIBQ14160 1630 aa24.52■■□□□ 1.52
CDC73-201ENST00000367435 DIEXFQ68CQ4 756 aaKnown RBP24.51■■□□□ 1.51
CDC73-201ENST00000367435 ANP32CO43423 234 aa24.48■■□□□ 1.51
CDC73-201ENST00000367435 SLC24A1O60721 1099 aa24.45■■□□□ 1.5
CDC73-201ENST00000367435 ZNF316A6NFI3 1004 aaPredicted RBP24.44■■□□□ 1.5
CDC73-201ENST00000367435 STAG3Q9UJ98 1225 aa24.44■■□□□ 1.5
CDC73-201ENST00000367435 MYT1Q01538 1121 aa24.36■■□□□ 1.49
CDC73-201ENST00000367435 CHGAP10645 457 aaKnown RBP24.31■■□□□ 1.48
CDC73-201ENST00000367435 CANXP27824 592 aaKnown RBP24.27■■□□□ 1.48
CDC73-201ENST00000367435 CHMP7Q8WUX9 453 aaPredicted RBP24.26■■□□□ 1.47
CDC73-201ENST00000367435 RTL5Q5HYW3 569 aaPredicted RBP24.23■■□□□ 1.47
CDC73-201ENST00000367435 PLPPR3Q6T4P5 718 aa24.2■■□□□ 1.46
CDC73-201ENST00000367435 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
CDC73-201ENST00000367435 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
CDC73-201ENST00000367435 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
CDC73-201ENST00000367435 TONSLQ96HA7 1378 aa24.07■■□□□ 1.44
CDC73-201ENST00000367435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.02■■□□□ 1.442e-7■■■□□ 14.6
CDC73-201ENST00000367435 BCL11AQ9H165 835 aa24■■□□□ 1.43
CDC73-201ENST00000367435 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
CDC73-201ENST00000367435 MTUS2Q5JR59 1369 aa23.98■■□□□ 1.43
CDC73-201ENST00000367435 CHIC2Q9UKJ5 165 aa23.93■■□□□ 1.42
CDC73-201ENST00000367435 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
CDC73-201ENST00000367435 PLEKHD1A6NEE1 506 aa23.89■■□□□ 1.42
CDC73-201ENST00000367435 KCNH8Q96L42 1107 aa23.82■■□□□ 1.4
CDC73-201ENST00000367435 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
CDC73-201ENST00000367435 ACIN1Q9UKV3 1341 aaKnown RBP23.78■■□□□ 1.4
CDC73-201ENST00000367435 SCAF1Q9H7N4 1312 aaKnown RBP23.74■■□□□ 1.39
CDC73-201ENST00000367435 NPM2Q86SE8 214 aaKnown RBP23.74■■□□□ 1.39
CDC73-201ENST00000367435 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
CDC73-201ENST00000367435 KDM2AQ9Y2K7 1162 aa23.71■■□□□ 1.39
CDC73-201ENST00000367435 ARID4BQ4LE39 1312 aaPredicted RBP23.69■■□□□ 1.38
CDC73-201ENST00000367435 C14orf37Q86TY3 774 aa23.69■■□□□ 1.38
CDC73-201ENST00000367435 NACADO15069 1562 aa23.68■■□□□ 1.38
CDC73-201ENST00000367435 TMC1Q8TDI8 760 aa23.67■■□□□ 1.38
CDC73-201ENST00000367435 CLIP1P30622 1438 aa23.67■■□□□ 1.38
CDC73-201ENST00000367435 EEA1Q15075 1411 aa23.66■■□□□ 1.38
CDC73-201ENST00000367435 BAZ1BQ9UIG0 1483 aaKnown RBP23.66■■□□□ 1.38
CDC73-201ENST00000367435 ERCC6Q03468 1493 aa23.65■■□□□ 1.38
CDC73-201ENST00000367435 WDR43Q15061 677 aaKnown RBP eCLIP23.64■■□□□ 1.382e-6■■□□□ 13.1
CDC73-201ENST00000367435 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.6■■□□□ 1.37
CDC73-201ENST00000367435 GTF3C3Q9Y5Q9 886 aa23.6■■□□□ 1.37
CDC73-201ENST00000367435 A0A0G2JS52 829 aa23.59■■□□□ 1.37
CDC73-201ENST00000367435 DDX10Q13206 875 aaKnown RBP23.58■■□□□ 1.37
CDC73-201ENST00000367435 CFDP1Q9UEE9 299 aaPredicted RBP23.58■■□□□ 1.37
CDC73-201ENST00000367435 ANP32AP39687 249 aaKnown RBP23.58■■□□□ 1.37
CDC73-201ENST00000367435 UPF2Q9HAU5 1272 aaKnown RBP23.58■■□□□ 1.36
CDC73-201ENST00000367435 HNRNPUQ00839 825 aaKnown RBP eCLIP23.57■■□□□ 1.36
CDC73-201ENST00000367435 FAM9BQ8IZU0 186 aa23.57■■□□□ 1.36
CDC73-201ENST00000367435 KIF27Q86VH2 1401 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms