RNA–Protein interactions for RNA: ENST00000443462.6

SEC31A-207, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC31A, Length 4,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-207ENST00000443462 NISCHQ9Y2I1 1504 aa18.05■□□□□ 0.48
SEC31A-207ENST00000443462 CCDC180Q9P1Z9 1646 aa16.09■□□□□ 0.17
SEC31A-207ENST00000443462 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
SEC31A-207ENST00000443462 ABCC9O60706 1549 aa15.14■□□□□ 0.01
SEC31A-207ENST00000443462 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
SEC31A-207ENST00000443462 UNC13AQ9UPW8 1703 aa15.01□□□□□ -0.01
SEC31A-207ENST00000443462 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
SEC31A-207ENST00000443462 NACADO15069 1562 aa14.86□□□□□ -0.03
SEC31A-207ENST00000443462 RB1CC1Q8TDY2 1594 aa14.75□□□□□ -0.05
SEC31A-207ENST00000443462 BICRAQ9NZM4 1560 aa14.72□□□□□ -0.05
SEC31A-207ENST00000443462 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
SEC31A-207ENST00000443462 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
SEC31A-207ENST00000443462 DCAF8L2P0C7V8 631 aa14.14□□□□□ -0.15
SEC31A-207ENST00000443462 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
SEC31A-207ENST00000443462 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
SEC31A-207ENST00000443462 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.162e-7■■■■□ 22
SEC31A-207ENST00000443462 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.16
SEC31A-207ENST00000443462 SMARCA4P51532 1647 aa14.02□□□□□ -0.16
SEC31A-207ENST00000443462 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
SEC31A-207ENST00000443462 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
SEC31A-207ENST00000443462 DNAJC5BQ9UF47 199 aa13.9□□□□□ -0.18
SEC31A-207ENST00000443462 WIZO95785 1651 aa13.9□□□□□ -0.18
SEC31A-207ENST00000443462 BAZ1AQ9NRL2 1556 aaPredicted RBP13.86□□□□□ -0.19
SEC31A-207ENST00000443462 RSF1Q96T23 1441 aaPredicted RBP13.8□□□□□ -0.2
SEC31A-207ENST00000443462 ATAD2BQ9ULI0 1458 aa13.77□□□□□ -0.21
SEC31A-207ENST00000443462 HMGXB3Q12766 1538 aa13.75□□□□□ -0.21
SEC31A-207ENST00000443462 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
SEC31A-207ENST00000443462 SMARCA2P51531 1590 aa13.66□□□□□ -0.22
SEC31A-207ENST00000443462 TOP2AP11388 1531 aaKnown RBP13.64□□□□□ -0.23
SEC31A-207ENST00000443462 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
SEC31A-207ENST00000443462 BAZ1BQ9UIG0 1483 aaKnown RBP13.49□□□□□ -0.25
SEC31A-207ENST00000443462 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
SEC31A-207ENST00000443462 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
SEC31A-207ENST00000443462 NESP48681 1621 aa13.37□□□□□ -0.27
SEC31A-207ENST00000443462 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
SEC31A-207ENST00000443462 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
SEC31A-207ENST00000443462 CFTRP13569 1480 aa13.32□□□□□ -0.28
SEC31A-207ENST00000443462 CADPSQ9ULU8 1353 aa13.17□□□□□ -0.3
SEC31A-207ENST00000443462 WDR97A6NE52 1622 aa13.16□□□□□ -0.3
SEC31A-207ENST00000443462 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
SEC31A-207ENST00000443462 WDR62O43379 1518 aa13.14□□□□□ -0.31
SEC31A-207ENST00000443462 URB2Q14146 1524 aaKnown RBP13.13□□□□□ -0.31
SEC31A-207ENST00000443462 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
SEC31A-207ENST00000443462 CUX1P39880 1505 aa13.09□□□□□ -0.31
SEC31A-207ENST00000443462 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
SEC31A-207ENST00000443462 TARBP1Q13395 1621 aaKnown RBP13.07□□□□□ -0.32
SEC31A-207ENST00000443462 FANCD2Q9BXW9 1451 aa13.06□□□□□ -0.32
SEC31A-207ENST00000443462 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
SEC31A-207ENST00000443462 TOP2BQ02880 1626 aa13.04□□□□□ -0.32
SEC31A-207ENST00000443462 CUX2O14529 1486 aa13.01□□□□□ -0.33
SEC31A-207ENST00000443462 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
SEC31A-207ENST00000443462 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
SEC31A-207ENST00000443462 MRC2Q9UBG0 1479 aa12.96□□□□□ -0.33
SEC31A-207ENST00000443462 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
SEC31A-207ENST00000443462 ABCA5Q8WWZ7 1642 aa12.92□□□□□ -0.34
SEC31A-207ENST00000443462 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
SEC31A-207ENST00000443462 POLA1P09884 1462 aaPredicted RBP12.89□□□□□ -0.35
SEC31A-207ENST00000443462 PBRM1Q86U86 1689 aa12.85□□□□□ -0.35
SEC31A-207ENST00000443462 EIF4G3O43432 1585 aaKnown RBP12.84□□□□□ -0.35
SEC31A-207ENST00000443462 FGD5Q6ZNL6 1462 aa12.84□□□□□ -0.35
SEC31A-207ENST00000443462 ZNF608Q9ULD9 1512 aaPredicted RBP12.82□□□□□ -0.36
SEC31A-207ENST00000443462 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
SEC31A-207ENST00000443462 ABCA10Q8WWZ4 1543 aa12.79□□□□□ -0.36
SEC31A-207ENST00000443462 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
SEC31A-207ENST00000443462 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
SEC31A-207ENST00000443462 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
SEC31A-207ENST00000443462 IFT140Q96RY7 1462 aa12.71□□□□□ -0.38
SEC31A-207ENST00000443462 CHD1O14646 1710 aa12.7□□□□□ -0.38
SEC31A-207ENST00000443462 ADAMTS12P58397 1594 aa12.67□□□□□ -0.38
SEC31A-207ENST00000443462 SOGA1O94964 1423 aa12.65□□□□□ -0.38
SEC31A-207ENST00000443462 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.397e-7■■■■□ 21.1
SEC31A-207ENST00000443462 ERICH3Q5RHP9 1530 aa12.63□□□□□ -0.39
SEC31A-207ENST00000443462 CHIC1Q5VXU3 224 aa12.61□□□□□ -0.39
SEC31A-207ENST00000443462 CEP170Q5SW79 1584 aa12.58□□□□□ -0.4
SEC31A-207ENST00000443462 CUL7Q14999 1698 aa12.58□□□□□ -0.4
SEC31A-207ENST00000443462 CLASP1Q7Z460 1538 aa12.57□□□□□ -0.4
SEC31A-207ENST00000443462 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
SEC31A-207ENST00000443462 GAPVD1Q14C86 1478 aa12.55□□□□□ -0.4
SEC31A-207ENST00000443462 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
SEC31A-207ENST00000443462 IGF1RP08069 1367 aa12.53□□□□□ -0.4
SEC31A-207ENST00000443462 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
SEC31A-207ENST00000443462 TDRD9Q8NDG6 1382 aaKnown RBP12.52□□□□□ -0.4
SEC31A-207ENST00000443462 KIF21BO75037 1637 aa12.52□□□□□ -0.4
SEC31A-207ENST00000443462 CTTNBP2Q8WZ74 1663 aa12.52□□□□□ -0.41
SEC31A-207ENST00000443462 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
SEC31A-207ENST00000443462 GRIN2BQ13224 1484 aa12.5□□□□□ -0.41
SEC31A-207ENST00000443462 NUP160Q12769 1436 aa12.46□□□□□ -0.41
SEC31A-207ENST00000443462 SYNJ2O15056 1496 aa12.45□□□□□ -0.42
SEC31A-207ENST00000443462 GRIN2AQ12879 1464 aa12.44□□□□□ -0.42
SEC31A-207ENST00000443462 ERCC6L2Q5T890 1561 aa12.44□□□□□ -0.42
SEC31A-207ENST00000443462 LRRIQ1Q96JM4 1722 aa12.43□□□□□ -0.42
SEC31A-207ENST00000443462 RAPGEF2Q9Y4G8 1499 aa12.41□□□□□ -0.42
SEC31A-207ENST00000443462 SAMD9Q5K651 1589 aa12.4□□□□□ -0.42
SEC31A-207ENST00000443462 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
SEC31A-207ENST00000443462 FHAD1B1AJZ9 1412 aa12.39□□□□□ -0.43
SEC31A-207ENST00000443462 DISP1Q96F81 1524 aa12.34□□□□□ -0.43
SEC31A-207ENST00000443462 EEA1Q15075 1411 aa12.32□□□□□ -0.44
SEC31A-207ENST00000443462 RIMBP3CA6NJZ7 1639 aa12.32□□□□□ -0.44
SEC31A-207ENST00000443462 RIMBP3BA6NNM3 1639 aa12.32□□□□□ -0.44
SEC31A-207ENST00000443462 RIMBP3Q9UFD9 1639 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms