RNA–Protein interactions for RNA: ENST00000348405.8

SEC31A-203, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC31A, Length 4,012 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-203ENST00000348405 NISCHQ9Y2I1 1504 aa9.19□□□□□ -0.94
SEC31A-203ENST00000348405 SHROOM4Q9ULL8 1493 aa8.08□□□□□ -1.12
SEC31A-203ENST00000348405 DCAF8L2P0C7V8 631 aa8.03□□□□□ -1.12
SEC31A-203ENST00000348405 SUPT5HO00267 1087 aaKnown RBP7.83□□□□□ -1.16
SEC31A-203ENST00000348405 CCDC180Q9P1Z9 1646 aa7.74□□□□□ -1.17
SEC31A-203ENST00000348405 ZCCHC6Q5VYS8 1495 aaKnown RBP7.72□□□□□ -1.17
SEC31A-203ENST00000348405 AEBP2Q6ZN18 517 aaPredicted RBP7.68□□□□□ -1.18
SEC31A-203ENST00000348405 ABCC9O60706 1549 aa7.61□□□□□ -1.19
SEC31A-203ENST00000348405 SCRIBQ14160 1630 aa7.5□□□□□ -1.21
SEC31A-203ENST00000348405 EHMT2Q96KQ7 1210 aa7.39□□□□□ -1.23
SEC31A-203ENST00000348405 CHIC1Q5VXU3 224 aa7.38□□□□□ -1.23
SEC31A-203ENST00000348405 MYO15BQ96JP2 1530 aa7.37□□□□□ -1.23
SEC31A-203ENST00000348405 DCAF1Q9Y4B6 1507 aa7.37□□□□□ -1.23
SEC31A-203ENST00000348405 PABPN1Q86U42 306 aaKnown RBP eCLIP7.34□□□□□ -1.232e-7■■■■□ 22
SEC31A-203ENST00000348405 CECR2Q9BXF3 1484 aa7.31□□□□□ -1.24
SEC31A-203ENST00000348405 LOC105371045A0A1W2PR82 267 aa7.31□□□□□ -1.24
SEC31A-203ENST00000348405 FAM9AQ8IZU1 332 aaPredicted RBP7.3□□□□□ -1.24
SEC31A-203ENST00000348405 RSF1Q96T23 1441 aaPredicted RBP7.27□□□□□ -1.25
SEC31A-203ENST00000348405 RB1CC1Q8TDY2 1594 aa7.24□□□□□ -1.25
SEC31A-203ENST00000348405 NACADO15069 1562 aa7.23□□□□□ -1.25
SEC31A-203ENST00000348405 MROH2BQ7Z745 1585 aa7.22□□□□□ -1.25
SEC31A-203ENST00000348405 WIZO95785 1651 aa7.19□□□□□ -1.26
SEC31A-203ENST00000348405 TRIM41Q8WV44 630 aa7.18□□□□□ -1.26
SEC31A-203ENST00000348405 UNC13AQ9UPW8 1703 aa7.14□□□□□ -1.27
SEC31A-203ENST00000348405 PCGF6Q9BYE7 350 aa7.14□□□□□ -1.27
SEC31A-203ENST00000348405 PPARGC1BQ86YN6 1023 aaKnown RBP7.12□□□□□ -1.27
SEC31A-203ENST00000348405 TTBK1Q5TCY1 1321 aaPredicted RBP7.08□□□□□ -1.28
SEC31A-203ENST00000348405 DNAJC5Q9H3Z4 198 aa7.08□□□□□ -1.28
SEC31A-203ENST00000348405 BICRAQ9NZM4 1560 aa7.05□□□□□ -1.28
SEC31A-203ENST00000348405 ABCC8Q09428 1581 aa7.04□□□□□ -1.28
SEC31A-203ENST00000348405 BAZ1AQ9NRL2 1556 aaPredicted RBP7.04□□□□□ -1.28
SEC31A-203ENST00000348405 SMARCA4P51532 1647 aa7.03□□□□□ -1.28
SEC31A-203ENST00000348405 RANGAP1P46060 587 aaPredicted RBP7.01□□□□□ -1.29
SEC31A-203ENST00000348405 CCDC88BA6NC98 1476 aa7.01□□□□□ -1.29
SEC31A-203ENST00000348405 SLC24A1O60721 1099 aa6.97□□□□□ -1.29
SEC31A-203ENST00000348405 SMARCA2P51531 1590 aa6.96□□□□□ -1.3
SEC31A-203ENST00000348405 TOP2AP11388 1531 aaKnown RBP6.96□□□□□ -1.3
SEC31A-203ENST00000348405 SOGA1O94964 1423 aa6.94□□□□□ -1.3
SEC31A-203ENST00000348405 RUSC2Q8N2Y8 1516 aa6.94□□□□□ -1.3
SEC31A-203ENST00000348405 BAZ1BQ9UIG0 1483 aaKnown RBP6.91□□□□□ -1.3
SEC31A-203ENST00000348405 ATAD2BQ9ULI0 1458 aa6.91□□□□□ -1.3
SEC31A-203ENST00000348405 UBTFP17480 764 aaKnown RBP6.91□□□□□ -1.3
SEC31A-203ENST00000348405 EIF4G1Q04637 1599 aaKnown RBP6.9□□□□□ -1.31
SEC31A-203ENST00000348405 HRCP23327 699 aa6.89□□□□□ -1.31
SEC31A-203ENST00000348405 TRIM26Q12899 539 aaPredicted RBP6.86□□□□□ -1.31
SEC31A-203ENST00000348405 DNAJC5BQ9UF47 199 aa6.86□□□□□ -1.31
SEC31A-203ENST00000348405 WRNQ14191 1432 aaPredicted RBP eCLIP6.84□□□□□ -1.31
SEC31A-203ENST00000348405 SYNJ1O43426 1573 aa6.83□□□□□ -1.32
SEC31A-203ENST00000348405 CSRNP3Q8WYN3 585 aa6.83□□□□□ -1.32
SEC31A-203ENST00000348405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.8□□□□□ -1.32
SEC31A-203ENST00000348405 CEP162Q5TB80 1403 aa6.79□□□□□ -1.32
SEC31A-203ENST00000348405 PEG3Q9GZU2 1588 aa6.79□□□□□ -1.32
SEC31A-203ENST00000348405 RAPGEF2Q9Y4G8 1499 aa6.74□□□□□ -1.33
SEC31A-203ENST00000348405 CC2D2AQ9P2K1 1620 aa6.74□□□□□ -1.33
SEC31A-203ENST00000348405 NESP48681 1621 aa6.74□□□□□ -1.33
SEC31A-203ENST00000348405 PLPPR3Q6T4P5 718 aa6.74□□□□□ -1.33
SEC31A-203ENST00000348405 NCAPD3P42695 1498 aa6.73□□□□□ -1.33
SEC31A-203ENST00000348405 HNRNPUL2Q1KMD3 747 aaKnown RBP6.73□□□□□ -1.33
SEC31A-203ENST00000348405 P3H3Q8IVL6 736 aa6.72□□□□□ -1.33
SEC31A-203ENST00000348405 CUX1P39880 1505 aa6.71□□□□□ -1.34
SEC31A-203ENST00000348405 CCER1Q8TC90 406 aaPredicted RBP6.71□□□□□ -1.34
SEC31A-203ENST00000348405 GOLGA3Q08378 1498 aa6.7□□□□□ -1.34
SEC31A-203ENST00000348405 TNIKQ9UKE5 1360 aa6.69□□□□□ -1.34
SEC31A-203ENST00000348405 ATP1B4Q9UN42 357 aaPredicted RBP6.69□□□□□ -1.34
SEC31A-203ENST00000348405 CLIP1P30622 1438 aa6.68□□□□□ -1.34
SEC31A-203ENST00000348405 HMGXB3Q12766 1538 aa6.68□□□□□ -1.34
SEC31A-203ENST00000348405 ITGAEP38570 1179 aa6.67□□□□□ -1.34
SEC31A-203ENST00000348405 CFTRP13569 1480 aa6.67□□□□□ -1.34
SEC31A-203ENST00000348405 TOP2BQ02880 1626 aa6.67□□□□□ -1.34
SEC31A-203ENST00000348405 CEP164Q9UPV0 1460 aa6.66□□□□□ -1.34
SEC31A-203ENST00000348405 CADPSQ9ULU8 1353 aa6.66□□□□□ -1.34
SEC31A-203ENST00000348405 CUX2O14529 1486 aa6.66□□□□□ -1.34
SEC31A-203ENST00000348405 RAD54L2Q9Y4B4 1467 aa6.65□□□□□ -1.34
SEC31A-203ENST00000348405 APLP2Q06481 763 aa6.65□□□□□ -1.35
SEC31A-203ENST00000348405 EEA1Q15075 1411 aa6.64□□□□□ -1.35
SEC31A-203ENST00000348405 KANK4Q5T7N3 995 aaPredicted RBP6.64□□□□□ -1.35
SEC31A-203ENST00000348405 FGD5Q6ZNL6 1462 aa6.63□□□□□ -1.35
SEC31A-203ENST00000348405 FANCD2Q9BXW9 1451 aa6.63□□□□□ -1.35
SEC31A-203ENST00000348405 ARID3CA6NKF2 412 aa6.63□□□□□ -1.35
SEC31A-203ENST00000348405 PHF23Q9BUL5 403 aaPredicted RBP6.62□□□□□ -1.35
SEC31A-203ENST00000348405 KIF27Q86VH2 1401 aa6.62□□□□□ -1.35
SEC31A-203ENST00000348405 TDRD9Q8NDG6 1382 aaKnown RBP6.61□□□□□ -1.35
SEC31A-203ENST00000348405 BIVM-ERCC5R4GMW8 1640 aa6.61□□□□□ -1.35
SEC31A-203ENST00000348405 KIF21BO75037 1637 aa6.6□□□□□ -1.35
SEC31A-203ENST00000348405 ARAP1Q96P48 1450 aa6.59□□□□□ -1.35
SEC31A-203ENST00000348405 IGF1RP08069 1367 aa6.59□□□□□ -1.35
SEC31A-203ENST00000348405 VPS8Q8N3P4 1428 aa6.58□□□□□ -1.36
SEC31A-203ENST00000348405 PRXQ9BXM0 1461 aa6.58□□□□□ -1.36
SEC31A-203ENST00000348405 CARMIL1Q5VZK9 1371 aa6.57□□□□□ -1.36
SEC31A-203ENST00000348405 POLA1P09884 1462 aaPredicted RBP6.56□□□□□ -1.36
SEC31A-203ENST00000348405 TOPBP1Q92547 1522 aa6.55□□□□□ -1.36
SEC31A-203ENST00000348405 URB2Q14146 1524 aaKnown RBP6.55□□□□□ -1.36
SEC31A-203ENST00000348405 ARHGAP35Q9NRY4 1499 aa6.54□□□□□ -1.36
SEC31A-203ENST00000348405 FHOD3Q2V2M9 1422 aa6.54□□□□□ -1.36
SEC31A-203ENST00000348405 ZEB1P37275 1124 aaPredicted RBP6.53□□□□□ -1.36
SEC31A-203ENST00000348405 RTN4Q9NQC3 1192 aaKnown RBP6.53□□□□□ -1.36
SEC31A-203ENST00000348405 KIF21AQ7Z4S6 1674 aa6.52□□□□□ -1.37
SEC31A-203ENST00000348405 FBLN2P98095 1184 aa6.52□□□□□ -1.37
SEC31A-203ENST00000348405 FAM50AQ14320 339 aaKnown RBP6.52□□□□□ -1.37
SEC31A-203ENST00000348405 PRDM2Q13029 1718 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms