RNA–Protein interactions for RNA: ENST00000355196.6

SEC31A-204, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SEC31A, Length 4,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-204ENST00000355196 NISCHQ9Y2I1 1504 aa11.15□□□□□ -0.63
SEC31A-204ENST00000355196 CCDC180Q9P1Z9 1646 aa9.5□□□□□ -0.89
SEC31A-204ENST00000355196 ZCCHC6Q5VYS8 1495 aaKnown RBP9.48□□□□□ -0.89
SEC31A-204ENST00000355196 SHROOM4Q9ULL8 1493 aa9.35□□□□□ -0.91
SEC31A-204ENST00000355196 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
SEC31A-204ENST00000355196 MYO15BQ96JP2 1530 aa9.28□□□□□ -0.92
SEC31A-204ENST00000355196 SUPT5HO00267 1087 aaKnown RBP9.26□□□□□ -0.93
SEC31A-204ENST00000355196 DCAF1Q9Y4B6 1507 aa9.18□□□□□ -0.94
SEC31A-204ENST00000355196 CHIC1Q5VXU3 224 aa9.06□□□□□ -0.96
SEC31A-204ENST00000355196 ABCC9O60706 1549 aa8.99□□□□□ -0.97
SEC31A-204ENST00000355196 EHMT2Q96KQ7 1210 aa8.96□□□□□ -0.97
SEC31A-204ENST00000355196 PCGF6Q9BYE7 350 aa8.95□□□□□ -0.98
SEC31A-204ENST00000355196 HRCP23327 699 aa8.85□□□□□ -0.99
SEC31A-204ENST00000355196 SCRIBQ14160 1630 aa8.84□□□□□ -0.99
SEC31A-204ENST00000355196 RSF1Q96T23 1441 aaPredicted RBP8.83□□□□□ -1
SEC31A-204ENST00000355196 RB1CC1Q8TDY2 1594 aa8.83□□□□□ -1
SEC31A-204ENST00000355196 LOC105371045A0A1W2PR82 267 aa8.78□□□□□ -1
SEC31A-204ENST00000355196 EIF4G1Q04637 1599 aaKnown RBP8.78□□□□□ -1
SEC31A-204ENST00000355196 PPARGC1BQ86YN6 1023 aaKnown RBP8.73□□□□□ -1.01
SEC31A-204ENST00000355196 FAM9AQ8IZU1 332 aaPredicted RBP8.73□□□□□ -1.01
SEC31A-204ENST00000355196 CECR2Q9BXF3 1484 aa8.72□□□□□ -1.01
SEC31A-204ENST00000355196 MROH2BQ7Z745 1585 aa8.71□□□□□ -1.02
SEC31A-204ENST00000355196 WIZO95785 1651 aa8.71□□□□□ -1.02
SEC31A-204ENST00000355196 UNC13AQ9UPW8 1703 aa8.68□□□□□ -1.02
SEC31A-204ENST00000355196 TTBK1Q5TCY1 1321 aaPredicted RBP8.68□□□□□ -1.02
SEC31A-204ENST00000355196 NACADO15069 1562 aa8.66□□□□□ -1.02
SEC31A-204ENST00000355196 BAZ1AQ9NRL2 1556 aaPredicted RBP8.62□□□□□ -1.03
SEC31A-204ENST00000355196 PELP1Q8IZL8 1130 aaKnown RBP8.6□□□□□ -1.03
SEC31A-204ENST00000355196 CENPBP07199 599 aaPredicted RBP8.55□□□□□ -1.04
SEC31A-204ENST00000355196 CCER1Q8TC90 406 aaPredicted RBP8.54□□□□□ -1.04
SEC31A-204ENST00000355196 TRIM26Q12899 539 aaPredicted RBP8.53□□□□□ -1.04
SEC31A-204ENST00000355196 ZEB1P37275 1124 aaPredicted RBP8.52□□□□□ -1.04
SEC31A-204ENST00000355196 YTHDC1Q96MU7 727 aaKnown RBP8.51□□□□□ -1.05
SEC31A-204ENST00000355196 SMARCA4P51532 1647 aa8.51□□□□□ -1.05
SEC31A-204ENST00000355196 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
SEC31A-204ENST00000355196 TOP2AP11388 1531 aaKnown RBP8.49□□□□□ -1.05
SEC31A-204ENST00000355196 ABCC8Q09428 1581 aa8.48□□□□□ -1.05
SEC31A-204ENST00000355196 BICRAQ9NZM4 1560 aa8.47□□□□□ -1.05
SEC31A-204ENST00000355196 TRIM41Q8WV44 630 aa8.47□□□□□ -1.05
SEC31A-204ENST00000355196 CCDC88BA6NC98 1476 aa8.45□□□□□ -1.06
SEC31A-204ENST00000355196 APLP2Q06481 763 aa8.44□□□□□ -1.06
SEC31A-204ENST00000355196 RANGAP1P46060 587 aaPredicted RBP8.41□□□□□ -1.06
SEC31A-204ENST00000355196 PEG3Q9GZU2 1588 aa8.41□□□□□ -1.06
SEC31A-204ENST00000355196 RUSC2Q8N2Y8 1516 aa8.4□□□□□ -1.07
SEC31A-204ENST00000355196 SOGA1O94964 1423 aa8.37□□□□□ -1.07
SEC31A-204ENST00000355196 WRNQ14191 1432 aaPredicted RBP eCLIP8.37□□□□□ -1.07
SEC31A-204ENST00000355196 MYT1Q01538 1121 aa8.36□□□□□ -1.07
SEC31A-204ENST00000355196 SYNJ1O43426 1573 aa8.33□□□□□ -1.08
SEC31A-204ENST00000355196 ERICH6Q7L0X2 663 aa8.31□□□□□ -1.08
SEC31A-204ENST00000355196 UBTFP17480 764 aaKnown RBP8.29□□□□□ -1.08
SEC31A-204ENST00000355196 CEP162Q5TB80 1403 aa8.28□□□□□ -1.08
SEC31A-204ENST00000355196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.28□□□□□ -1.08
SEC31A-204ENST00000355196 SCAF1Q9H7N4 1312 aaKnown RBP8.27□□□□□ -1.08
SEC31A-204ENST00000355196 KIF21BO75037 1637 aa8.26□□□□□ -1.09
SEC31A-204ENST00000355196 TNIKQ9UKE5 1360 aa8.25□□□□□ -1.09
SEC31A-204ENST00000355196 DIEXFQ68CQ4 756 aaKnown RBP8.22□□□□□ -1.09
SEC31A-204ENST00000355196 GTF3C3Q9Y5Q9 886 aa8.22□□□□□ -1.09
SEC31A-204ENST00000355196 BIVM-ERCC5R4GMW8 1640 aa8.21□□□□□ -1.09
SEC31A-204ENST00000355196 NEFLP07196 543 aa8.21□□□□□ -1.1
SEC31A-204ENST00000355196 ATAD2BQ9ULI0 1458 aa8.2□□□□□ -1.1
SEC31A-204ENST00000355196 TOP2BQ02880 1626 aa8.19□□□□□ -1.1
SEC31A-204ENST00000355196 HNRNPUL2Q1KMD3 747 aaKnown RBP8.18□□□□□ -1.1
SEC31A-204ENST00000355196 EEA1Q15075 1411 aa8.18□□□□□ -1.1
SEC31A-204ENST00000355196 ATP1B4Q9UN42 357 aaPredicted RBP8.17□□□□□ -1.1
SEC31A-204ENST00000355196 GOLGA3Q08378 1498 aa8.16□□□□□ -1.1
SEC31A-204ENST00000355196 RAPGEF2Q9Y4G8 1499 aa8.15□□□□□ -1.1
SEC31A-204ENST00000355196 CSRNP3Q8WYN3 585 aa8.14□□□□□ -1.11
SEC31A-204ENST00000355196 PABPN1Q86U42 306 aaKnown RBP eCLIP8.13□□□□□ -1.115e-7■■□□□ 13.7
SEC31A-204ENST00000355196 ITGAEP38570 1179 aa8.12□□□□□ -1.11
SEC31A-204ENST00000355196 CLIP1P30622 1438 aa8.12□□□□□ -1.11
SEC31A-204ENST00000355196 BAZ1BQ9UIG0 1483 aaKnown RBP8.11□□□□□ -1.11
SEC31A-204ENST00000355196 PRDM2Q13029 1718 aa8.11□□□□□ -1.11
SEC31A-204ENST00000355196 CEP164Q9UPV0 1460 aa8.11□□□□□ -1.11
SEC31A-204ENST00000355196 NEUROD1Q13562 356 aa8.1□□□□□ -1.11
SEC31A-204ENST00000355196 CUX1P39880 1505 aa8.1□□□□□ -1.11
SEC31A-204ENST00000355196 ACIN1Q9UKV3 1341 aaKnown RBP8.1□□□□□ -1.11
SEC31A-204ENST00000355196 ARAP1Q96P48 1450 aa8.1□□□□□ -1.11
SEC31A-204ENST00000355196 PRXQ9BXM0 1461 aa8.09□□□□□ -1.11
SEC31A-204ENST00000355196 VPS8Q8N3P4 1428 aa8.08□□□□□ -1.12
SEC31A-204ENST00000355196 ERICH3Q5RHP9 1530 aa8.07□□□□□ -1.12
SEC31A-204ENST00000355196 HMGXB3Q12766 1538 aa8.06□□□□□ -1.12
SEC31A-204ENST00000355196 BCANQ96GW7 911 aa8.06□□□□□ -1.12
SEC31A-204ENST00000355196 CNGB1Q14028 1251 aaPredicted RBP8.03□□□□□ -1.12
SEC31A-204ENST00000355196 NCAPD3P42695 1498 aa8.02□□□□□ -1.13
SEC31A-204ENST00000355196 CUX2O14529 1486 aa8.01□□□□□ -1.13
SEC31A-204ENST00000355196 CFTRP13569 1480 aa8□□□□□ -1.13
SEC31A-204ENST00000355196 ARHGAP35Q9NRY4 1499 aa7.98□□□□□ -1.13
SEC31A-204ENST00000355196 RRBP1Q9P2E9 1410 aaKnown RBP7.97□□□□□ -1.13
SEC31A-204ENST00000355196 ZNF316A6NFI3 1004 aaPredicted RBP7.97□□□□□ -1.13
SEC31A-204ENST00000355196 LRRIQ1Q96JM4 1722 aa7.97□□□□□ -1.13
SEC31A-204ENST00000355196 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
SEC31A-204ENST00000355196 DHX57Q6P158 1386 aaKnown RBP7.96□□□□□ -1.13
SEC31A-204ENST00000355196 POLR3GLQ9BT43 218 aa7.96□□□□□ -1.14
SEC31A-204ENST00000355196 MAPKBP1O60336 1514 aa7.95□□□□□ -1.14
SEC31A-204ENST00000355196 MIER1Q8N108 512 aa7.93□□□□□ -1.14
SEC31A-204ENST00000355196 CFAP43Q8NDM7 1665 aa7.92□□□□□ -1.14
SEC31A-204ENST00000355196 WDR97A6NE52 1622 aa7.91□□□□□ -1.14
SEC31A-204ENST00000355196 TIAM1Q13009 1591 aa7.9□□□□□ -1.14
SEC31A-204ENST00000355196 MAP3K1Q13233 1512 aa7.89□□□□□ -1.15
SEC31A-204ENST00000355196 IGF1RP08069 1367 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms