RNA–Protein interactions for RNA: ENST00000395310.6

SEC31A-205, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SEC31A, Length 4,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-205ENST00000395310 NISCHQ9Y2I1 1504 aa23.6■■□□□ 1.37
SEC31A-205ENST00000395310 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
SEC31A-205ENST00000395310 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
SEC31A-205ENST00000395310 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
SEC31A-205ENST00000395310 PCGF6Q9BYE7 350 aa21.59■■□□□ 1.05
SEC31A-205ENST00000395310 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
SEC31A-205ENST00000395310 HRCP23327 699 aa21.11■□□□□ 0.97
SEC31A-205ENST00000395310 PPARGC1BQ86YN6 1023 aaKnown RBP21.06■□□□□ 0.96
SEC31A-205ENST00000395310 FAM9AQ8IZU1 332 aaPredicted RBP20.99■□□□□ 0.95
SEC31A-205ENST00000395310 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
SEC31A-205ENST00000395310 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
SEC31A-205ENST00000395310 TTBK1Q5TCY1 1321 aaPredicted RBP20.69■□□□□ 0.9
SEC31A-205ENST00000395310 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
SEC31A-205ENST00000395310 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
SEC31A-205ENST00000395310 TRIM26Q12899 539 aaPredicted RBP20.54■□□□□ 0.88
SEC31A-205ENST00000395310 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
SEC31A-205ENST00000395310 CCER1Q8TC90 406 aaPredicted RBP20.38■□□□□ 0.85
SEC31A-205ENST00000395310 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
SEC31A-205ENST00000395310 YTHDC1Q96MU7 727 aaKnown RBP20.16■□□□□ 0.82
SEC31A-205ENST00000395310 CENPBP07199 599 aaPredicted RBP20.14■□□□□ 0.82
SEC31A-205ENST00000395310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.81
SEC31A-205ENST00000395310 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
SEC31A-205ENST00000395310 MYT1Q01538 1121 aa19.95■□□□□ 0.78
SEC31A-205ENST00000395310 UBTFP17480 764 aaKnown RBP19.9■□□□□ 0.78
SEC31A-205ENST00000395310 APLP2Q06481 763 aa19.89■□□□□ 0.77
SEC31A-205ENST00000395310 DIEXFQ68CQ4 756 aaKnown RBP19.81■□□□□ 0.76
SEC31A-205ENST00000395310 ZCCHC6Q5VYS8 1495 aaKnown RBP19.79■□□□□ 0.76
SEC31A-205ENST00000395310 GTF3C3Q9Y5Q9 886 aa19.77■□□□□ 0.76
SEC31A-205ENST00000395310 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
SEC31A-205ENST00000395310 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
SEC31A-205ENST00000395310 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
SEC31A-205ENST00000395310 ACIN1Q9UKV3 1341 aaKnown RBP19.62■□□□□ 0.73
SEC31A-205ENST00000395310 NEUROD1Q13562 356 aa19.56■□□□□ 0.72
SEC31A-205ENST00000395310 ITGAEP38570 1179 aa19.39■□□□□ 0.69
SEC31A-205ENST00000395310 ZNF316A6NFI3 1004 aaPredicted RBP19.33■□□□□ 0.69
SEC31A-205ENST00000395310 ATP1B4Q9UN42 357 aaPredicted RBP19.31■□□□□ 0.68
SEC31A-205ENST00000395310 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
SEC31A-205ENST00000395310 SCRIBQ14160 1630 aa19.19■□□□□ 0.66
SEC31A-205ENST00000395310 ABCC9O60706 1549 aa19.17■□□□□ 0.66
SEC31A-205ENST00000395310 BCANQ96GW7 911 aa19.15■□□□□ 0.66
SEC31A-205ENST00000395310 NEFLP07196 543 aa19.14■□□□□ 0.65
SEC31A-205ENST00000395310 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
SEC31A-205ENST00000395310 MIER1Q8N108 512 aa19.11■□□□□ 0.65
SEC31A-205ENST00000395310 ERICH6Q7L0X2 663 aa19.09■□□□□ 0.65
SEC31A-205ENST00000395310 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
SEC31A-205ENST00000395310 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.642e-7■■■■□ 22
SEC31A-205ENST00000395310 CNGB1Q14028 1251 aaPredicted RBP18.87■□□□□ 0.61
SEC31A-205ENST00000395310 RB1CC1Q8TDY2 1594 aa18.82■□□□□ 0.6
SEC31A-205ENST00000395310 FAM50AQ14320 339 aaKnown RBP18.8■□□□□ 0.6
SEC31A-205ENST00000395310 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
SEC31A-205ENST00000395310 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
SEC31A-205ENST00000395310 FKBP8Q14318 412 aa18.71■□□□□ 0.59
SEC31A-205ENST00000395310 POLR3GLQ9BT43 218 aa18.68■□□□□ 0.58
SEC31A-205ENST00000395310 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
SEC31A-205ENST00000395310 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
SEC31A-205ENST00000395310 HIRIP3Q9BW71 556 aaPredicted RBP18.64■□□□□ 0.58
SEC31A-205ENST00000395310 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
SEC31A-205ENST00000395310 SOGA1O94964 1423 aa18.62■□□□□ 0.57
SEC31A-205ENST00000395310 TRIM52Q96A61 297 aa18.61■□□□□ 0.57
SEC31A-205ENST00000395310 ANP32CO43423 234 aa18.59■□□□□ 0.57
SEC31A-205ENST00000395310 CLIP1P30622 1438 aa18.57■□□□□ 0.56
SEC31A-205ENST00000395310 TNIKQ9UKE5 1360 aa18.55■□□□□ 0.56
SEC31A-205ENST00000395310 SUPT16HQ9Y5B9 1047 aaKnown RBP18.54■□□□□ 0.56
SEC31A-205ENST00000395310 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
SEC31A-205ENST00000395310 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
SEC31A-205ENST00000395310 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
SEC31A-205ENST00000395310 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
SEC31A-205ENST00000395310 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
SEC31A-205ENST00000395310 CDK11AQ9UQ88 783 aaPredicted RBP18.43■□□□□ 0.54
SEC31A-205ENST00000395310 CLSPNQ9HAW4 1339 aa18.42■□□□□ 0.54
SEC31A-205ENST00000395310 ANP32EQ9BTT0 268 aa18.41■□□□□ 0.54
SEC31A-205ENST00000395310 HNRNPUQ00839 825 aaKnown RBP eCLIP18.38■□□□□ 0.53
SEC31A-205ENST00000395310 WIZO95785 1651 aa18.36■□□□□ 0.53
SEC31A-205ENST00000395310 WRNQ14191 1432 aaPredicted RBP eCLIP18.36■□□□□ 0.53
SEC31A-205ENST00000395310 EEA1Q15075 1411 aa18.33■□□□□ 0.52
SEC31A-205ENST00000395310 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.52
SEC31A-205ENST00000395310 RUSC2Q8N2Y8 1516 aa18.32■□□□□ 0.52
SEC31A-205ENST00000395310 KCNH8Q96L42 1107 aa18.31■□□□□ 0.52
SEC31A-205ENST00000395310 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
SEC31A-205ENST00000395310 KANK4Q5T7N3 995 aaPredicted RBP18.28■□□□□ 0.52
SEC31A-205ENST00000395310 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
SEC31A-205ENST00000395310 TSHZ2Q9NRE2 1034 aa18.27■□□□□ 0.52
SEC31A-205ENST00000395310 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
SEC31A-205ENST00000395310 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
SEC31A-205ENST00000395310 TONSLQ96HA7 1378 aa18.23■□□□□ 0.51
SEC31A-205ENST00000395310 SENP3-EIF4A1A0A087X0R7 540 aa18.22■□□□□ 0.51
SEC31A-205ENST00000395310 RTL5Q5HYW3 569 aaPredicted RBP18.22■□□□□ 0.51
SEC31A-205ENST00000395310 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
SEC31A-205ENST00000395310 CHIC2Q9UKJ5 165 aa18.17■□□□□ 0.5
SEC31A-205ENST00000395310 VPS8Q8N3P4 1428 aa18.16■□□□□ 0.5
SEC31A-205ENST00000395310 NACADO15069 1562 aa18.16■□□□□ 0.5
SEC31A-205ENST00000395310 NBR1Q14596 966 aa18.15■□□□□ 0.5
SEC31A-205ENST00000395310 RBM19Q9Y4C8 960 aaKnown RBP18.12■□□□□ 0.49
SEC31A-205ENST00000395310 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
SEC31A-205ENST00000395310 DAXXQ9UER7 740 aaPredicted RBP18.09■□□□□ 0.49
SEC31A-205ENST00000395310 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
SEC31A-205ENST00000395310 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
SEC31A-205ENST00000395310 DHX57Q6P158 1386 aaKnown RBP18.05■□□□□ 0.48
SEC31A-205ENST00000395310 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
SEC31A-205ENST00000395310 RAPGEF2Q9Y4G8 1499 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms