RNA–Protein interactions for RNA: ENST00000567204.5

KIFC3-230, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-230ENST00000567204 NISCHQ9Y2I1 1504 aa34.93■■■■□ 3.18
KIFC3-230ENST00000567204 CCDC180Q9P1Z9 1646 aa31.03■■■□□ 2.56
KIFC3-230ENST00000567204 ABCC9O60706 1549 aa30.03■■■□□ 2.4
KIFC3-230ENST00000567204 ZCCHC6Q5VYS8 1495 aaKnown RBP29.18■■■□□ 2.26
KIFC3-230ENST00000567204 NACADO15069 1562 aa29.06■■■□□ 2.24
KIFC3-230ENST00000567204 RB1CC1Q8TDY2 1594 aa29.03■■■□□ 2.24
KIFC3-230ENST00000567204 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
KIFC3-230ENST00000567204 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
KIFC3-230ENST00000567204 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
KIFC3-230ENST00000567204 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
KIFC3-230ENST00000567204 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
KIFC3-230ENST00000567204 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
KIFC3-230ENST00000567204 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
KIFC3-230ENST00000567204 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
KIFC3-230ENST00000567204 EIF4G1Q04637 1599 aaKnown RBP27.41■■□□□ 1.98
KIFC3-230ENST00000567204 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
KIFC3-230ENST00000567204 CC2D2AQ9P2K1 1620 aa27.25■■□□□ 1.95
KIFC3-230ENST00000567204 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
KIFC3-230ENST00000567204 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
KIFC3-230ENST00000567204 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
KIFC3-230ENST00000567204 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
KIFC3-230ENST00000567204 PEG3Q9GZU2 1588 aa26.87■■□□□ 1.89
KIFC3-230ENST00000567204 ATAD2BQ9ULI0 1458 aa26.86■■□□□ 1.89
KIFC3-230ENST00000567204 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
KIFC3-230ENST00000567204 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
KIFC3-230ENST00000567204 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
KIFC3-230ENST00000567204 RSF1Q96T23 1441 aaPredicted RBP26.66■■□□□ 1.86
KIFC3-230ENST00000567204 WIZO95785 1651 aa26.65■■□□□ 1.86
KIFC3-230ENST00000567204 BAZ1BQ9UIG0 1483 aaKnown RBP26.6■■□□□ 1.85
KIFC3-230ENST00000567204 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
KIFC3-230ENST00000567204 NESP48681 1621 aa26.09■■□□□ 1.77
KIFC3-230ENST00000567204 LAMC3Q9Y6N6 1575 aa26.08■■□□□ 1.77
KIFC3-230ENST00000567204 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
KIFC3-230ENST00000567204 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
KIFC3-230ENST00000567204 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
KIFC3-230ENST00000567204 CFTRP13569 1480 aa25.93■■□□□ 1.74
KIFC3-230ENST00000567204 KIF21AQ7Z4S6 1674 aa25.84■■□□□ 1.73
KIFC3-230ENST00000567204 PRDM2Q13029 1718 aa25.83■■□□□ 1.73
KIFC3-230ENST00000567204 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
KIFC3-230ENST00000567204 PDS5BQ9NTI5 1447 aa25.81■■□□□ 1.72
KIFC3-230ENST00000567204 THOC2Q8NI27 1593 aaKnown RBP25.73■■□□□ 1.71
KIFC3-230ENST00000567204 FANCD2Q9BXW9 1451 aa25.71■■□□□ 1.71
KIFC3-230ENST00000567204 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
KIFC3-230ENST00000567204 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
KIFC3-230ENST00000567204 CUX2O14529 1486 aa25.57■■□□□ 1.68
KIFC3-230ENST00000567204 WDR62O43379 1518 aa25.56■■□□□ 1.68
KIFC3-230ENST00000567204 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
KIFC3-230ENST00000567204 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
KIFC3-230ENST00000567204 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
KIFC3-230ENST00000567204 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
KIFC3-230ENST00000567204 CUX1P39880 1505 aa25.26■■□□□ 1.63
KIFC3-230ENST00000567204 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
KIFC3-230ENST00000567204 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
KIFC3-230ENST00000567204 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
KIFC3-230ENST00000567204 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
KIFC3-230ENST00000567204 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
KIFC3-230ENST00000567204 FGD5Q6ZNL6 1462 aa25.1■■□□□ 1.61
KIFC3-230ENST00000567204 WRNQ14191 1432 aaPredicted RBP eCLIP25.1■■□□□ 1.61
KIFC3-230ENST00000567204 TOP2BQ02880 1626 aa25.09■■□□□ 1.61
KIFC3-230ENST00000567204 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
KIFC3-230ENST00000567204 ZNF608Q9ULD9 1512 aaPredicted RBP25.01■■□□□ 1.59
KIFC3-230ENST00000567204 WDR97A6NE52 1622 aa25.01■■□□□ 1.59
KIFC3-230ENST00000567204 SOGA1O94964 1423 aa24.97■■□□□ 1.59
KIFC3-230ENST00000567204 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
KIFC3-230ENST00000567204 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
KIFC3-230ENST00000567204 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.573e-9■■■■■ 42.8
KIFC3-230ENST00000567204 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
KIFC3-230ENST00000567204 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
KIFC3-230ENST00000567204 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
KIFC3-230ENST00000567204 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
KIFC3-230ENST00000567204 GRIN2BQ13224 1484 aa24.7■■□□□ 1.54
KIFC3-230ENST00000567204 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.54
KIFC3-230ENST00000567204 MAGI1Q96QZ7 1491 aaPredicted RBP24.64■■□□□ 1.53
KIFC3-230ENST00000567204 CHD1O14646 1710 aa24.6■■□□□ 1.53
KIFC3-230ENST00000567204 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
KIFC3-230ENST00000567204 ADAMTS12P58397 1594 aa24.55■■□□□ 1.52
KIFC3-230ENST00000567204 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
KIFC3-230ENST00000567204 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
KIFC3-230ENST00000567204 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
KIFC3-230ENST00000567204 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
KIFC3-230ENST00000567204 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
KIFC3-230ENST00000567204 IGF1RP08069 1367 aa24.44■■□□□ 1.5
KIFC3-230ENST00000567204 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
KIFC3-230ENST00000567204 RUSC2Q8N2Y8 1516 aa24.43■■□□□ 1.5
KIFC3-230ENST00000567204 CUL7Q14999 1698 aa24.42■■□□□ 1.5
KIFC3-230ENST00000567204 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
KIFC3-230ENST00000567204 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
KIFC3-230ENST00000567204 CLASP1Q7Z460 1538 aa24.36■■□□□ 1.49
KIFC3-230ENST00000567204 FBLN2P98095 1184 aa24.36■■□□□ 1.49
KIFC3-230ENST00000567204 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
KIFC3-230ENST00000567204 NUP160Q12769 1436 aa24.31■■□□□ 1.48
KIFC3-230ENST00000567204 CEP170Q5SW79 1584 aa24.31■■□□□ 1.48
KIFC3-230ENST00000567204 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
KIFC3-230ENST00000567204 EEA1Q15075 1411 aa24.21■■□□□ 1.47
KIFC3-230ENST00000567204 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
KIFC3-230ENST00000567204 RAPGEF2Q9Y4G8 1499 aa24.17■■□□□ 1.46
KIFC3-230ENST00000567204 SHROOM2Q13796 1616 aa24.16■■□□□ 1.46
KIFC3-230ENST00000567204 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
KIFC3-230ENST00000567204 RIMBP3CA6NJZ7 1639 aa24.15■■□□□ 1.46
KIFC3-230ENST00000567204 RIMBP3BA6NNM3 1639 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms