RNA–Protein interactions for RNA: ENST00000508900.1

FRAS1-203, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best)

Gene FRAS1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-203ENST00000508900 NISCHQ9Y2I1 1504 aa25.01■■□□□ 1.59
FRAS1-203ENST00000508900 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
FRAS1-203ENST00000508900 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
FRAS1-203ENST00000508900 HRCP23327 699 aa21.45■■□□□ 1.02
FRAS1-203ENST00000508900 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
FRAS1-203ENST00000508900 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
FRAS1-203ENST00000508900 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
FRAS1-203ENST00000508900 PCGF6Q9BYE7 350 aa21.04■□□□□ 0.96
FRAS1-203ENST00000508900 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
FRAS1-203ENST00000508900 PPARGC1BQ86YN6 1023 aaKnown RBP20.93■□□□□ 0.94
FRAS1-203ENST00000508900 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
FRAS1-203ENST00000508900 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
FRAS1-203ENST00000508900 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.88
FRAS1-203ENST00000508900 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
FRAS1-203ENST00000508900 ZEB1P37275 1124 aaPredicted RBP20.27■□□□□ 0.84
FRAS1-203ENST00000508900 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
FRAS1-203ENST00000508900 ABCC9O60706 1549 aa20.15■□□□□ 0.82
FRAS1-203ENST00000508900 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
FRAS1-203ENST00000508900 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
FRAS1-203ENST00000508900 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
FRAS1-203ENST00000508900 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
FRAS1-203ENST00000508900 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.77
FRAS1-203ENST00000508900 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
FRAS1-203ENST00000508900 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
FRAS1-203ENST00000508900 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
FRAS1-203ENST00000508900 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
FRAS1-203ENST00000508900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
FRAS1-203ENST00000508900 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
FRAS1-203ENST00000508900 CECR2Q9BXF3 1484 aa19.51■□□□□ 0.71
FRAS1-203ENST00000508900 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
FRAS1-203ENST00000508900 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
FRAS1-203ENST00000508900 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
FRAS1-203ENST00000508900 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
FRAS1-203ENST00000508900 CENPBP07199 599 aaPredicted RBP19.43■□□□□ 0.7
FRAS1-203ENST00000508900 WIZO95785 1651 aa19.41■□□□□ 0.7
FRAS1-203ENST00000508900 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.69
FRAS1-203ENST00000508900 MYT1Q01538 1121 aa19.37■□□□□ 0.69
FRAS1-203ENST00000508900 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
FRAS1-203ENST00000508900 NACADO15069 1562 aa19.27■□□□□ 0.68
FRAS1-203ENST00000508900 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
FRAS1-203ENST00000508900 ZNF316A6NFI3 1004 aaPredicted RBP19.22■□□□□ 0.67
FRAS1-203ENST00000508900 CCDC88BA6NC98 1476 aa19.18■□□□□ 0.66
FRAS1-203ENST00000508900 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
FRAS1-203ENST00000508900 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
FRAS1-203ENST00000508900 TTBK1Q5TCY1 1321 aaPredicted RBP19.14■□□□□ 0.65
FRAS1-203ENST00000508900 SOGA1O94964 1423 aa19.09■□□□□ 0.65
FRAS1-203ENST00000508900 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
FRAS1-203ENST00000508900 MIER1Q8N108 512 aa19.03■□□□□ 0.64
FRAS1-203ENST00000508900 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
FRAS1-203ENST00000508900 EEA1Q15075 1411 aa19.02■□□□□ 0.64
FRAS1-203ENST00000508900 YTHDC1Q96MU7 727 aaKnown RBP19.02■□□□□ 0.63
FRAS1-203ENST00000508900 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
FRAS1-203ENST00000508900 CSRNP3Q8WYN3 585 aa18.99■□□□□ 0.63
FRAS1-203ENST00000508900 SMARCA4P51532 1647 aa18.94■□□□□ 0.62
FRAS1-203ENST00000508900 GOLGA3Q08378 1498 aa18.93■□□□□ 0.62
FRAS1-203ENST00000508900 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
FRAS1-203ENST00000508900 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
FRAS1-203ENST00000508900 KIF21BO75037 1637 aa18.78■□□□□ 0.6
FRAS1-203ENST00000508900 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
FRAS1-203ENST00000508900 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
FRAS1-203ENST00000508900 CLIP1P30622 1438 aa18.74■□□□□ 0.59
FRAS1-203ENST00000508900 CLSPNQ9HAW4 1339 aa18.69■□□□□ 0.58
FRAS1-203ENST00000508900 SYNJ1O43426 1573 aa18.67■□□□□ 0.58
FRAS1-203ENST00000508900 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
FRAS1-203ENST00000508900 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
FRAS1-203ENST00000508900 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
FRAS1-203ENST00000508900 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
FRAS1-203ENST00000508900 RAPGEF2Q9Y4G8 1499 aa18.59■□□□□ 0.57
FRAS1-203ENST00000508900 APLP2Q06481 763 aa18.57■□□□□ 0.56
FRAS1-203ENST00000508900 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
FRAS1-203ENST00000508900 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.56
FRAS1-203ENST00000508900 CUX2O14529 1486 aa18.42■□□□□ 0.54
FRAS1-203ENST00000508900 ARAP1Q96P48 1450 aa18.42■□□□□ 0.54
FRAS1-203ENST00000508900 RRBP1Q9P2E9 1410 aaKnown RBP18.42■□□□□ 0.54
FRAS1-203ENST00000508900 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
FRAS1-203ENST00000508900 ANP32EQ9BTT0 268 aa18.41■□□□□ 0.54
FRAS1-203ENST00000508900 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
FRAS1-203ENST00000508900 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
FRAS1-203ENST00000508900 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
FRAS1-203ENST00000508900 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
FRAS1-203ENST00000508900 PRXQ9BXM0 1461 aa18.36■□□□□ 0.53
FRAS1-203ENST00000508900 KCNH8Q96L42 1107 aa18.33■□□□□ 0.52
FRAS1-203ENST00000508900 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
FRAS1-203ENST00000508900 BIVM-ERCC5R4GMW8 1640 aa18.32■□□□□ 0.52
FRAS1-203ENST00000508900 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
FRAS1-203ENST00000508900 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
FRAS1-203ENST00000508900 MAPKBP1O60336 1514 aa18.25■□□□□ 0.51
FRAS1-203ENST00000508900 RAB3GAP2Q9H2M9 1393 aa18.19■□□□□ 0.5
FRAS1-203ENST00000508900 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
FRAS1-203ENST00000508900 FKBP8Q14318 412 aa18.17■□□□□ 0.5
FRAS1-203ENST00000508900 BCANQ96GW7 911 aa18.17■□□□□ 0.5
FRAS1-203ENST00000508900 BCL11AQ9H165 835 aa18.14■□□□□ 0.49
FRAS1-203ENST00000508900 WDR97A6NE52 1622 aa18.14■□□□□ 0.49
FRAS1-203ENST00000508900 PPP1R15AO75807 674 aaPredicted RBP18.11■□□□□ 0.49
FRAS1-203ENST00000508900 ITGAEP38570 1179 aa18.11■□□□□ 0.49
FRAS1-203ENST00000508900 DDX10Q13206 875 aaKnown RBP18.11■□□□□ 0.49
FRAS1-203ENST00000508900 CUX1P39880 1505 aa18.1■□□□□ 0.49
FRAS1-203ENST00000508900 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
FRAS1-203ENST00000508900 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.49
FRAS1-203ENST00000508900 RBM19Q9Y4C8 960 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms