RNA–Protein interactions for RNA: ENST00000452931.1

HDLBP-225, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-225ENST00000452931 NISCHQ9Y2I1 1504 aa22.32■■□□□ 1.16
HDLBP-225ENST00000452931 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
HDLBP-225ENST00000452931 ABCC9O60706 1549 aa20.02■□□□□ 0.79
HDLBP-225ENST00000452931 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
HDLBP-225ENST00000452931 NACADO15069 1562 aa18.97■□□□□ 0.63
HDLBP-225ENST00000452931 DCAF8L2P0C7V8 631 aa18.86■□□□□ 0.61
HDLBP-225ENST00000452931 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
HDLBP-225ENST00000452931 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
HDLBP-225ENST00000452931 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
HDLBP-225ENST00000452931 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
HDLBP-225ENST00000452931 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
HDLBP-225ENST00000452931 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
HDLBP-225ENST00000452931 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
HDLBP-225ENST00000452931 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
HDLBP-225ENST00000452931 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
HDLBP-225ENST00000452931 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
HDLBP-225ENST00000452931 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
HDLBP-225ENST00000452931 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
HDLBP-225ENST00000452931 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
HDLBP-225ENST00000452931 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
HDLBP-225ENST00000452931 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
HDLBP-225ENST00000452931 SMARCA4P51532 1647 aa17.41■□□□□ 0.38
HDLBP-225ENST00000452931 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
HDLBP-225ENST00000452931 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
HDLBP-225ENST00000452931 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
HDLBP-225ENST00000452931 DNAJC5Q9H3Z4 198 aa17.32■□□□□ 0.36
HDLBP-225ENST00000452931 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
HDLBP-225ENST00000452931 CUX2O14529 1486 aa17.3■□□□□ 0.36
HDLBP-225ENST00000452931 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
HDLBP-225ENST00000452931 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
HDLBP-225ENST00000452931 NESP48681 1621 aa17.19■□□□□ 0.34
HDLBP-225ENST00000452931 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
HDLBP-225ENST00000452931 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
HDLBP-225ENST00000452931 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
HDLBP-225ENST00000452931 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
HDLBP-225ENST00000452931 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.32
HDLBP-225ENST00000452931 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
HDLBP-225ENST00000452931 WIZO95785 1651 aa16.98■□□□□ 0.31
HDLBP-225ENST00000452931 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
HDLBP-225ENST00000452931 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
HDLBP-225ENST00000452931 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
HDLBP-225ENST00000452931 WDR62O43379 1518 aa16.8■□□□□ 0.28
HDLBP-225ENST00000452931 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
HDLBP-225ENST00000452931 CFTRP13569 1480 aa16.77■□□□□ 0.28
HDLBP-225ENST00000452931 TOP2AP11388 1531 aaKnown RBP16.76■□□□□ 0.27
HDLBP-225ENST00000452931 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
HDLBP-225ENST00000452931 PRDM2Q13029 1718 aa16.64■□□□□ 0.25
HDLBP-225ENST00000452931 URB2Q14146 1524 aaKnown RBP16.61■□□□□ 0.25
HDLBP-225ENST00000452931 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
HDLBP-225ENST00000452931 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
HDLBP-225ENST00000452931 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
HDLBP-225ENST00000452931 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
HDLBP-225ENST00000452931 IFT140Q96RY7 1462 aa16.46■□□□□ 0.23
HDLBP-225ENST00000452931 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
HDLBP-225ENST00000452931 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
HDLBP-225ENST00000452931 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
HDLBP-225ENST00000452931 EIF4G3O43432 1585 aaKnown RBP16.32■□□□□ 0.2
HDLBP-225ENST00000452931 TARBP1Q13395 1621 aaKnown RBP16.3■□□□□ 0.2
HDLBP-225ENST00000452931 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
HDLBP-225ENST00000452931 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
HDLBP-225ENST00000452931 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
HDLBP-225ENST00000452931 POLA1P09884 1462 aaPredicted RBP16.27■□□□□ 0.19
HDLBP-225ENST00000452931 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.192e-7■□□□□ 9
HDLBP-225ENST00000452931 CHD1O14646 1710 aa16.22■□□□□ 0.19
HDLBP-225ENST00000452931 ARHGEF11O15085 1522 aa16.22■□□□□ 0.19
HDLBP-225ENST00000452931 SOGA1O94964 1423 aa16.21■□□□□ 0.19
HDLBP-225ENST00000452931 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
HDLBP-225ENST00000452931 FBLN2P98095 1184 aa16.18■□□□□ 0.18
HDLBP-225ENST00000452931 WDR97A6NE52 1622 aa16.17■□□□□ 0.18
HDLBP-225ENST00000452931 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
HDLBP-225ENST00000452931 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
HDLBP-225ENST00000452931 CUX1P39880 1505 aa16.14■□□□□ 0.17
HDLBP-225ENST00000452931 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
HDLBP-225ENST00000452931 SNAPC4Q5SXM2 1469 aa16.09■□□□□ 0.17
HDLBP-225ENST00000452931 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
HDLBP-225ENST00000452931 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-225ENST00000452931 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-225ENST00000452931 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
HDLBP-225ENST00000452931 ARAP1Q96P48 1450 aa16.04■□□□□ 0.16
HDLBP-225ENST00000452931 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
HDLBP-225ENST00000452931 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
HDLBP-225ENST00000452931 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.15
HDLBP-225ENST00000452931 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.15
HDLBP-225ENST00000452931 PBRM1Q86U86 1689 aa16.02■□□□□ 0.15
HDLBP-225ENST00000452931 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
HDLBP-225ENST00000452931 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
HDLBP-225ENST00000452931 ABCA5Q8WWZ7 1642 aa15.96■□□□□ 0.15
HDLBP-225ENST00000452931 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
HDLBP-225ENST00000452931 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
HDLBP-225ENST00000452931 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
HDLBP-225ENST00000452931 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
HDLBP-225ENST00000452931 ADAMTS12P58397 1594 aa15.83■□□□□ 0.12
HDLBP-225ENST00000452931 FHAD1B1AJZ9 1412 aa15.81■□□□□ 0.12
HDLBP-225ENST00000452931 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
HDLBP-225ENST00000452931 NUP160Q12769 1436 aa15.79■□□□□ 0.12
HDLBP-225ENST00000452931 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
HDLBP-225ENST00000452931 SHROOM2Q13796 1616 aa15.75■□□□□ 0.11
HDLBP-225ENST00000452931 ERCC6L2Q5T890 1561 aa15.74■□□□□ 0.11
HDLBP-225ENST00000452931 JPH4Q96JJ6 628 aa15.68■□□□□ 0.1
HDLBP-225ENST00000452931 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms