RNA–Protein interactions for RNA: ENST00000445690.6

KIFC3-203, Transcript of kinesin family member C3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KIFC3, Length 3,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-203ENST00000445690 NISCHQ9Y2I1 1504 aa33.76■■■□□ 2.99
KIFC3-203ENST00000445690 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
KIFC3-203ENST00000445690 DCAF8L2P0C7V8 631 aa30.17■■■□□ 2.42
KIFC3-203ENST00000445690 SUPT5HO00267 1087 aaKnown RBP30.01■■■□□ 2.39
KIFC3-203ENST00000445690 PPARGC1BQ86YN6 1023 aaKnown RBP29.22■■■□□ 2.27
KIFC3-203ENST00000445690 HRCP23327 699 aa29.17■■■□□ 2.26
KIFC3-203ENST00000445690 PCGF6Q9BYE7 350 aa28.9■■■□□ 2.22
KIFC3-203ENST00000445690 PELP1Q8IZL8 1130 aaKnown RBP28.52■■■□□ 2.16
KIFC3-203ENST00000445690 ZCCHC6Q5VYS8 1495 aaKnown RBP28.38■■■□□ 2.13
KIFC3-203ENST00000445690 CHIC1Q5VXU3 224 aa28.38■■■□□ 2.13
KIFC3-203ENST00000445690 EHMT2Q96KQ7 1210 aa28.33■■■□□ 2.13
KIFC3-203ENST00000445690 LOC105371045A0A1W2PR82 267 aa28.12■■■□□ 2.09
KIFC3-203ENST00000445690 SCAF1Q9H7N4 1312 aaKnown RBP28.12■■■□□ 2.09
KIFC3-203ENST00000445690 MYO15BQ96JP2 1530 aa28.01■■■□□ 2.07
KIFC3-203ENST00000445690 FAM9AQ8IZU1 332 aaPredicted RBP28■■■□□ 2.07
KIFC3-203ENST00000445690 CCDC180Q9P1Z9 1646 aa27.94■■■□□ 2.06
KIFC3-203ENST00000445690 TRIM41Q8WV44 630 aa27.54■■■□□ 2
KIFC3-203ENST00000445690 ABCC9O60706 1549 aa27.48■■□□□ 1.99
KIFC3-203ENST00000445690 MYT1Q01538 1121 aa27.36■■□□□ 1.97
KIFC3-203ENST00000445690 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
KIFC3-203ENST00000445690 TTBK1Q5TCY1 1321 aaPredicted RBP27.3■■□□□ 1.96
KIFC3-203ENST00000445690 TRIM26Q12899 539 aaPredicted RBP27.26■■□□□ 1.95
KIFC3-203ENST00000445690 NEUROD1Q13562 356 aa27.25■■□□□ 1.95
KIFC3-203ENST00000445690 GTF3C3Q9Y5Q9 886 aa27.23■■□□□ 1.95
KIFC3-203ENST00000445690 ACIN1Q9UKV3 1341 aaKnown RBP27.11■■□□□ 1.93
KIFC3-203ENST00000445690 RSF1Q96T23 1441 aaPredicted RBP27.03■■□□□ 1.92
KIFC3-203ENST00000445690 DCAF1Q9Y4B6 1507 aa26.98■■□□□ 1.91
KIFC3-203ENST00000445690 ZEB1P37275 1124 aaPredicted RBP26.95■■□□□ 1.91
KIFC3-203ENST00000445690 CECR2Q9BXF3 1484 aa26.83■■□□□ 1.89
KIFC3-203ENST00000445690 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
KIFC3-203ENST00000445690 YTHDC1Q96MU7 727 aaKnown RBP26.79■■□□□ 1.88
KIFC3-203ENST00000445690 CENPBP07199 599 aaPredicted RBP26.72■■□□□ 1.87
KIFC3-203ENST00000445690 RB1CC1Q8TDY2 1594 aa26.72■■□□□ 1.87
KIFC3-203ENST00000445690 RANGAP1P46060 587 aaPredicted RBP26.71■■□□□ 1.87
KIFC3-203ENST00000445690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.62■■□□□ 1.85
KIFC3-203ENST00000445690 DIEXFQ68CQ4 756 aaKnown RBP26.55■■□□□ 1.84
KIFC3-203ENST00000445690 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.84
KIFC3-203ENST00000445690 UBTFP17480 764 aaKnown RBP26.51■■□□□ 1.83
KIFC3-203ENST00000445690 CCER1Q8TC90 406 aaPredicted RBP26.47■■□□□ 1.83
KIFC3-203ENST00000445690 WIZO95785 1651 aa26.31■■□□□ 1.8
KIFC3-203ENST00000445690 BCL11AQ9H165 835 aa26.29■■□□□ 1.8
KIFC3-203ENST00000445690 NACADO15069 1562 aa26.25■■□□□ 1.79
KIFC3-203ENST00000445690 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
KIFC3-203ENST00000445690 HNRNPUL2Q1KMD3 747 aaKnown RBP26.07■■□□□ 1.76
KIFC3-203ENST00000445690 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
KIFC3-203ENST00000445690 CSRNP3Q8WYN3 585 aa25.98■■□□□ 1.75
KIFC3-203ENST00000445690 SOGA1O94964 1423 aa25.98■■□□□ 1.75
KIFC3-203ENST00000445690 APLP2Q06481 763 aa25.91■■□□□ 1.74
KIFC3-203ENST00000445690 MIER1Q8N108 512 aa25.9■■□□□ 1.74
KIFC3-203ENST00000445690 BAZ1AQ9NRL2 1556 aaPredicted RBP25.89■■□□□ 1.74
KIFC3-203ENST00000445690 RUSC2Q8N2Y8 1516 aa25.82■■□□□ 1.72
KIFC3-203ENST00000445690 ANP32EQ9BTT0 268 aa25.8■■□□□ 1.72
KIFC3-203ENST00000445690 CEP162Q5TB80 1403 aa25.76■■□□□ 1.71
KIFC3-203ENST00000445690 ZNF316A6NFI3 1004 aaPredicted RBP25.72■■□□□ 1.71
KIFC3-203ENST00000445690 ITGAEP38570 1179 aa25.67■■□□□ 1.7
KIFC3-203ENST00000445690 BCANQ96GW7 911 aa25.62■■□□□ 1.69
KIFC3-203ENST00000445690 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
KIFC3-203ENST00000445690 TOP2AP11388 1531 aaKnown RBP25.59■■□□□ 1.69
KIFC3-203ENST00000445690 TSHZ2Q9NRE2 1034 aa25.58■■□□□ 1.69
KIFC3-203ENST00000445690 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
KIFC3-203ENST00000445690 ATP1B4Q9UN42 357 aaPredicted RBP25.56■■□□□ 1.68
KIFC3-203ENST00000445690 SUPT16HQ9Y5B9 1047 aaKnown RBP25.56■■□□□ 1.68
KIFC3-203ENST00000445690 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
KIFC3-203ENST00000445690 PRKCSHP14314 528 aaPredicted RBP25.52■■□□□ 1.68
KIFC3-203ENST00000445690 TNIKQ9UKE5 1360 aa25.47■■□□□ 1.67
KIFC3-203ENST00000445690 CLIP1P30622 1438 aa25.37■■□□□ 1.65
KIFC3-203ENST00000445690 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
KIFC3-203ENST00000445690 GOLGA3Q08378 1498 aa25.35■■□□□ 1.65
KIFC3-203ENST00000445690 P3H3Q8IVL6 736 aa25.3■■□□□ 1.64
KIFC3-203ENST00000445690 UNC13AQ9UPW8 1703 aa25.24■■□□□ 1.63
KIFC3-203ENST00000445690 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
KIFC3-203ENST00000445690 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.63
KIFC3-203ENST00000445690 RAPGEF2Q9Y4G8 1499 aa25.2■■□□□ 1.62
KIFC3-203ENST00000445690 EEA1Q15075 1411 aa25.19■■□□□ 1.62
KIFC3-203ENST00000445690 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
KIFC3-203ENST00000445690 KANK4Q5T7N3 995 aaPredicted RBP25.14■■□□□ 1.62
KIFC3-203ENST00000445690 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.62
KIFC3-203ENST00000445690 SYNJ1O43426 1573 aa25.13■■□□□ 1.61
KIFC3-203ENST00000445690 FKBP8Q14318 412 aa25.05■■□□□ 1.6
KIFC3-203ENST00000445690 FAM50AQ14320 339 aaKnown RBP25.04■■□□□ 1.6
KIFC3-203ENST00000445690 KCNH8Q96L42 1107 aa25■■□□□ 1.59
KIFC3-203ENST00000445690 RBM19Q9Y4C8 960 aaKnown RBP24.99■■□□□ 1.59
KIFC3-203ENST00000445690 VPS8Q8N3P4 1428 aa24.97■■□□□ 1.59
KIFC3-203ENST00000445690 ERICH6Q7L0X2 663 aa24.91■■□□□ 1.58
KIFC3-203ENST00000445690 ANO8Q9HCE9 1232 aaPredicted RBP24.85■■□□□ 1.57
KIFC3-203ENST00000445690 ARID3CA6NKF2 412 aa24.85■■□□□ 1.57
KIFC3-203ENST00000445690 HIRIP3Q9BW71 556 aaPredicted RBP24.84■■□□□ 1.57
KIFC3-203ENST00000445690 MSH5O43196 834 aa24.82■■□□□ 1.56
KIFC3-203ENST00000445690 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
KIFC3-203ENST00000445690 KIF21BO75037 1637 aa24.74■■□□□ 1.55
KIFC3-203ENST00000445690 CLSPNQ9HAW4 1339 aa24.72■■□□□ 1.55
KIFC3-203ENST00000445690 CUX2O14529 1486 aa24.72■■□□□ 1.55
KIFC3-203ENST00000445690 NEFLP07196 543 aa24.7■■□□□ 1.54
KIFC3-203ENST00000445690 CCDC136Q96JN2 1154 aa24.68■■□□□ 1.54
KIFC3-203ENST00000445690 SIN3AQ96ST3 1273 aa24.67■■□□□ 1.54
KIFC3-203ENST00000445690 TRIM52Q96A61 297 aa24.65■■□□□ 1.54
KIFC3-203ENST00000445690 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
KIFC3-203ENST00000445690 IRX6P78412 446 aaPredicted RBP24.63■■□□□ 1.53
KIFC3-203ENST00000445690 DEKP35659 375 aaKnown RBP24.6■■□□□ 1.53
KIFC3-203ENST00000445690 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms