RNA–Protein interactions for RNA: ENST00000421376.6

KIFC3-202, Transcript of kinesin family member C3, humanhuman

TSL 2 BASIC

Gene KIFC3, Length 3,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-202ENST00000421376 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
KIFC3-202ENST00000421376 SHROOM4Q9ULL8 1493 aa24.68■■□□□ 1.54
KIFC3-202ENST00000421376 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
KIFC3-202ENST00000421376 PCGF6Q9BYE7 350 aa23.7■■□□□ 1.38
KIFC3-202ENST00000421376 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
KIFC3-202ENST00000421376 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
KIFC3-202ENST00000421376 HRCP23327 699 aa23.66■■□□□ 1.38
KIFC3-202ENST00000421376 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.38
KIFC3-202ENST00000421376 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
KIFC3-202ENST00000421376 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
KIFC3-202ENST00000421376 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
KIFC3-202ENST00000421376 EHMT2Q96KQ7 1210 aa22.88■■□□□ 1.25
KIFC3-202ENST00000421376 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
KIFC3-202ENST00000421376 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
KIFC3-202ENST00000421376 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
KIFC3-202ENST00000421376 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.2
KIFC3-202ENST00000421376 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
KIFC3-202ENST00000421376 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
KIFC3-202ENST00000421376 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
KIFC3-202ENST00000421376 ZEB1P37275 1124 aaPredicted RBP22.16■■□□□ 1.14
KIFC3-202ENST00000421376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.13■■□□□ 1.13
KIFC3-202ENST00000421376 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
KIFC3-202ENST00000421376 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
KIFC3-202ENST00000421376 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
KIFC3-202ENST00000421376 CCER1Q8TC90 406 aaPredicted RBP21.95■■□□□ 1.1
KIFC3-202ENST00000421376 ABCC9O60706 1549 aa21.93■■□□□ 1.1
KIFC3-202ENST00000421376 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
KIFC3-202ENST00000421376 PELP1Q8IZL8 1130 aaKnown RBP21.87■■□□□ 1.09
KIFC3-202ENST00000421376 ACIN1Q9UKV3 1341 aaKnown RBP21.77■■□□□ 1.08
KIFC3-202ENST00000421376 GTF3C3Q9Y5Q9 886 aa21.75■■□□□ 1.07
KIFC3-202ENST00000421376 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
KIFC3-202ENST00000421376 DIEXFQ68CQ4 756 aaKnown RBP21.71■■□□□ 1.07
KIFC3-202ENST00000421376 YTHDC1Q96MU7 727 aaKnown RBP21.65■■□□□ 1.06
KIFC3-202ENST00000421376 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
KIFC3-202ENST00000421376 CENPBP07199 599 aaPredicted RBP21.47■■□□□ 1.03
KIFC3-202ENST00000421376 WIZO95785 1651 aa21.45■■□□□ 1.02
KIFC3-202ENST00000421376 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
KIFC3-202ENST00000421376 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
KIFC3-202ENST00000421376 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
KIFC3-202ENST00000421376 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
KIFC3-202ENST00000421376 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
KIFC3-202ENST00000421376 SOGA1O94964 1423 aa21.28■■□□□ 1
KIFC3-202ENST00000421376 MIER1Q8N108 512 aa21.27■■□□□ 1
KIFC3-202ENST00000421376 ZNF316A6NFI3 1004 aaPredicted RBP21.27■■□□□ 1
KIFC3-202ENST00000421376 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
KIFC3-202ENST00000421376 RUSC2Q8N2Y8 1516 aa21.2■□□□□ 0.98
KIFC3-202ENST00000421376 CSRNP3Q8WYN3 585 aa21.11■□□□□ 0.97
KIFC3-202ENST00000421376 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.96
KIFC3-202ENST00000421376 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.95
KIFC3-202ENST00000421376 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
KIFC3-202ENST00000421376 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
KIFC3-202ENST00000421376 NACADO15069 1562 aa20.94■□□□□ 0.94
KIFC3-202ENST00000421376 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
KIFC3-202ENST00000421376 APLP2Q06481 763 aa20.85■□□□□ 0.93
KIFC3-202ENST00000421376 SMARCA2P51531 1590 aa20.83■□□□□ 0.93
KIFC3-202ENST00000421376 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
KIFC3-202ENST00000421376 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
KIFC3-202ENST00000421376 MYT1Q01538 1121 aa20.76■□□□□ 0.91
KIFC3-202ENST00000421376 CLIP1P30622 1438 aa20.76■□□□□ 0.91
KIFC3-202ENST00000421376 ITGAEP38570 1179 aa20.75■□□□□ 0.91
KIFC3-202ENST00000421376 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
KIFC3-202ENST00000421376 KCNH8Q96L42 1107 aa20.69■□□□□ 0.9
KIFC3-202ENST00000421376 SUPT16HQ9Y5B9 1047 aaKnown RBP20.69■□□□□ 0.9
KIFC3-202ENST00000421376 BCANQ96GW7 911 aa20.66■□□□□ 0.9
KIFC3-202ENST00000421376 EEA1Q15075 1411 aa20.64■□□□□ 0.89
KIFC3-202ENST00000421376 KANK4Q5T7N3 995 aaPredicted RBP20.63■□□□□ 0.89
KIFC3-202ENST00000421376 RAPGEF2Q9Y4G8 1499 aa20.63■□□□□ 0.89
KIFC3-202ENST00000421376 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
KIFC3-202ENST00000421376 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.88
KIFC3-202ENST00000421376 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
KIFC3-202ENST00000421376 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
KIFC3-202ENST00000421376 TSHZ2Q9NRE2 1034 aa20.49■□□□□ 0.87
KIFC3-202ENST00000421376 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
KIFC3-202ENST00000421376 KIF21BO75037 1637 aa20.45■□□□□ 0.86
KIFC3-202ENST00000421376 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
KIFC3-202ENST00000421376 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
KIFC3-202ENST00000421376 FKBP8Q14318 412 aa20.35■□□□□ 0.85
KIFC3-202ENST00000421376 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.84
KIFC3-202ENST00000421376 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
KIFC3-202ENST00000421376 ATP1B4Q9UN42 357 aaPredicted RBP20.28■□□□□ 0.84
KIFC3-202ENST00000421376 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
KIFC3-202ENST00000421376 ANP32EQ9BTT0 268 aa20.24■□□□□ 0.83
KIFC3-202ENST00000421376 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
KIFC3-202ENST00000421376 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
KIFC3-202ENST00000421376 P3H3Q8IVL6 736 aa20.22■□□□□ 0.83
KIFC3-202ENST00000421376 CLSPNQ9HAW4 1339 aa20.21■□□□□ 0.83
KIFC3-202ENST00000421376 CCNB3Q8WWL7 1395 aa20.2■□□□□ 0.82
KIFC3-202ENST00000421376 RAB3GAP2Q9H2M9 1393 aa20.19■□□□□ 0.82
KIFC3-202ENST00000421376 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
KIFC3-202ENST00000421376 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
KIFC3-202ENST00000421376 IRX6P78412 446 aaPredicted RBP20.12■□□□□ 0.81
KIFC3-202ENST00000421376 RRBP1Q9P2E9 1410 aaKnown RBP20.09■□□□□ 0.81
KIFC3-202ENST00000421376 PRXQ9BXM0 1461 aa20.09■□□□□ 0.81
KIFC3-202ENST00000421376 RBM19Q9Y4C8 960 aaKnown RBP20.06■□□□□ 0.8
KIFC3-202ENST00000421376 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
KIFC3-202ENST00000421376 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
KIFC3-202ENST00000421376 NEFLP07196 543 aa20.04■□□□□ 0.8
KIFC3-202ENST00000421376 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
KIFC3-202ENST00000421376 ARHGAP35Q9NRY4 1499 aa20.03■□□□□ 0.8
KIFC3-202ENST00000421376 MAPKBP1O60336 1514 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms