RNA–Protein interactions for RNA: ENST00000541240.5

KIFC3-206, Transcript of kinesin family member C3, humanhuman

TSL 2 BASIC

Gene KIFC3, Length 3,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-206ENST00000541240 NISCHQ9Y2I1 1504 aa33.82■■■■□ 3
KIFC3-206ENST00000541240 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
KIFC3-206ENST00000541240 CCDC180Q9P1Z9 1646 aa28.74■■■□□ 2.19
KIFC3-206ENST00000541240 ZCCHC6Q5VYS8 1495 aaKnown RBP28.56■■■□□ 2.16
KIFC3-206ENST00000541240 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
KIFC3-206ENST00000541240 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
KIFC3-206ENST00000541240 DCAF1Q9Y4B6 1507 aa27.7■■■□□ 2.02
KIFC3-206ENST00000541240 ABCC9O60706 1549 aa27.28■■□□□ 1.96
KIFC3-206ENST00000541240 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
KIFC3-206ENST00000541240 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
KIFC3-206ENST00000541240 SCRIBQ14160 1630 aa27.01■■□□□ 1.91
KIFC3-206ENST00000541240 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
KIFC3-206ENST00000541240 NACADO15069 1562 aa26.66■■□□□ 1.86
KIFC3-206ENST00000541240 LOC105371045A0A1W2PR82 267 aa26.51■■□□□ 1.83
KIFC3-206ENST00000541240 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
KIFC3-206ENST00000541240 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
KIFC3-206ENST00000541240 MROH2BQ7Z745 1585 aa26.31■■□□□ 1.8
KIFC3-206ENST00000541240 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
KIFC3-206ENST00000541240 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
KIFC3-206ENST00000541240 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
KIFC3-206ENST00000541240 WIZO95785 1651 aa26.14■■□□□ 1.77
KIFC3-206ENST00000541240 HRCP23327 699 aa26.1■■□□□ 1.77
KIFC3-206ENST00000541240 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
KIFC3-206ENST00000541240 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
KIFC3-206ENST00000541240 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
KIFC3-206ENST00000541240 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
KIFC3-206ENST00000541240 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
KIFC3-206ENST00000541240 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
KIFC3-206ENST00000541240 TOP2AP11388 1531 aaKnown RBP25.7■■□□□ 1.7
KIFC3-206ENST00000541240 EIF4G1Q04637 1599 aaKnown RBP25.67■■□□□ 1.7
KIFC3-206ENST00000541240 PPARGC1BQ86YN6 1023 aaKnown RBP25.66■■□□□ 1.7
KIFC3-206ENST00000541240 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
KIFC3-206ENST00000541240 BICRAQ9NZM4 1560 aa25.59■■□□□ 1.69
KIFC3-206ENST00000541240 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
KIFC3-206ENST00000541240 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
KIFC3-206ENST00000541240 SOGA1O94964 1423 aa25.27■■□□□ 1.64
KIFC3-206ENST00000541240 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
KIFC3-206ENST00000541240 ATAD2BQ9ULI0 1458 aa25.19■■□□□ 1.62
KIFC3-206ENST00000541240 RUSC2Q8N2Y8 1516 aa25.16■■□□□ 1.62
KIFC3-206ENST00000541240 CSRNP3Q8WYN3 585 aa25.11■■□□□ 1.61
KIFC3-206ENST00000541240 WRNQ14191 1432 aaPredicted RBP eCLIP25.1■■□□□ 1.61
KIFC3-206ENST00000541240 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
KIFC3-206ENST00000541240 ZEB1P37275 1124 aaPredicted RBP25.06■■□□□ 1.6
KIFC3-206ENST00000541240 CEP162Q5TB80 1403 aa25.05■■□□□ 1.6
KIFC3-206ENST00000541240 EEA1Q15075 1411 aa25.03■■□□□ 1.6
KIFC3-206ENST00000541240 UBTFP17480 764 aaKnown RBP25.02■■□□□ 1.6
KIFC3-206ENST00000541240 TNIKQ9UKE5 1360 aa25.01■■□□□ 1.59
KIFC3-206ENST00000541240 TTBK1Q5TCY1 1321 aaPredicted RBP24.98■■□□□ 1.59
KIFC3-206ENST00000541240 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
KIFC3-206ENST00000541240 GOLGA3Q08378 1498 aa24.88■■□□□ 1.57
KIFC3-206ENST00000541240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.84■■□□□ 1.57
KIFC3-206ENST00000541240 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
KIFC3-206ENST00000541240 CCER1Q8TC90 406 aaPredicted RBP24.72■■□□□ 1.55
KIFC3-206ENST00000541240 NCAPD3P42695 1498 aa24.72■■□□□ 1.55
KIFC3-206ENST00000541240 KIF21BO75037 1637 aa24.69■■□□□ 1.54
KIFC3-206ENST00000541240 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
KIFC3-206ENST00000541240 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
KIFC3-206ENST00000541240 RAPGEF2Q9Y4G8 1499 aa24.65■■□□□ 1.54
KIFC3-206ENST00000541240 CLIP1P30622 1438 aa24.62■■□□□ 1.53
KIFC3-206ENST00000541240 RANGAP1P46060 587 aaPredicted RBP24.62■■□□□ 1.53
KIFC3-206ENST00000541240 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
KIFC3-206ENST00000541240 CUX1P39880 1505 aa24.49■■□□□ 1.51
KIFC3-206ENST00000541240 CFTRP13569 1480 aa24.48■■□□□ 1.51
KIFC3-206ENST00000541240 VPS8Q8N3P4 1428 aa24.48■■□□□ 1.51
KIFC3-206ENST00000541240 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
KIFC3-206ENST00000541240 PRXQ9BXM0 1461 aa24.4■■□□□ 1.5
KIFC3-206ENST00000541240 APLP2Q06481 763 aa24.38■■□□□ 1.49
KIFC3-206ENST00000541240 HNRNPUL2Q1KMD3 747 aaKnown RBP24.37■■□□□ 1.49
KIFC3-206ENST00000541240 KIF27Q86VH2 1401 aa24.34■■□□□ 1.49
KIFC3-206ENST00000541240 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
KIFC3-206ENST00000541240 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
KIFC3-206ENST00000541240 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
KIFC3-206ENST00000541240 ARAP1Q96P48 1450 aa24.23■■□□□ 1.47
KIFC3-206ENST00000541240 CUX2O14529 1486 aa24.16■■□□□ 1.46
KIFC3-206ENST00000541240 KANK4Q5T7N3 995 aaPredicted RBP24.15■■□□□ 1.46
KIFC3-206ENST00000541240 PRDM2Q13029 1718 aa24.14■■□□□ 1.46
KIFC3-206ENST00000541240 IGF1RP08069 1367 aa24.12■■□□□ 1.45
KIFC3-206ENST00000541240 DIEXFQ68CQ4 756 aaKnown RBP24.12■■□□□ 1.45
KIFC3-206ENST00000541240 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
KIFC3-206ENST00000541240 ARHGAP35Q9NRY4 1499 aa24.06■■□□□ 1.44
KIFC3-206ENST00000541240 NESP48681 1621 aa24.03■■□□□ 1.44
KIFC3-206ENST00000541240 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
KIFC3-206ENST00000541240 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
KIFC3-206ENST00000541240 ZNF316A6NFI3 1004 aaPredicted RBP23.98■■□□□ 1.43
KIFC3-206ENST00000541240 SCAF1Q9H7N4 1312 aaKnown RBP23.95■■□□□ 1.42
KIFC3-206ENST00000541240 RAD54L2Q9Y4B4 1467 aa23.9■■□□□ 1.42
KIFC3-206ENST00000541240 RRBP1Q9P2E9 1410 aaKnown RBP23.87■■□□□ 1.41
KIFC3-206ENST00000541240 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
KIFC3-206ENST00000541240 P3H3Q8IVL6 736 aa23.83■■□□□ 1.41
KIFC3-206ENST00000541240 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.4
KIFC3-206ENST00000541240 DNMBPQ6XZF7 1577 aa23.83■■□□□ 1.4
KIFC3-206ENST00000541240 DHX57Q6P158 1386 aaKnown RBP23.82■■□□□ 1.4
KIFC3-206ENST00000541240 ITGAEP38570 1179 aa23.81■■□□□ 1.4
KIFC3-206ENST00000541240 CCNB3Q8WWL7 1395 aa23.81■■□□□ 1.4
KIFC3-206ENST00000541240 NEUROD1Q13562 356 aa23.8■■□□□ 1.4
KIFC3-206ENST00000541240 ABCA10Q8WWZ4 1543 aa23.78■■□□□ 1.4
KIFC3-206ENST00000541240 ACIN1Q9UKV3 1341 aaKnown RBP23.77■■□□□ 1.4
KIFC3-206ENST00000541240 TIAM1Q13009 1591 aa23.73■■□□□ 1.39
KIFC3-206ENST00000541240 ATP1B4Q9UN42 357 aaPredicted RBP23.72■■□□□ 1.39
KIFC3-206ENST00000541240 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms