RNA–Protein interactions for RNA: ENST00000311785.11

SEC31A-202, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC31A, Length 3,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-202ENST00000311785 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
SEC31A-202ENST00000311785 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
SEC31A-202ENST00000311785 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
SEC31A-202ENST00000311785 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
SEC31A-202ENST00000311785 PCGF6Q9BYE7 350 aa21.23■□□□□ 0.99
SEC31A-202ENST00000311785 PPARGC1BQ86YN6 1023 aaKnown RBP21.04■□□□□ 0.96
SEC31A-202ENST00000311785 HRCP23327 699 aa20.98■□□□□ 0.95
SEC31A-202ENST00000311785 EHMT2Q96KQ7 1210 aa20.7■□□□□ 0.9
SEC31A-202ENST00000311785 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
SEC31A-202ENST00000311785 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
SEC31A-202ENST00000311785 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
SEC31A-202ENST00000311785 FAM9AQ8IZU1 332 aaPredicted RBP20.37■□□□□ 0.85
SEC31A-202ENST00000311785 TRIM26Q12899 539 aaPredicted RBP20.15■□□□□ 0.82
SEC31A-202ENST00000311785 TTBK1Q5TCY1 1321 aaPredicted RBP20.06■□□□□ 0.8
SEC31A-202ENST00000311785 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
SEC31A-202ENST00000311785 PELP1Q8IZL8 1130 aaKnown RBP19.87■□□□□ 0.77
SEC31A-202ENST00000311785 ZEB1P37275 1124 aaPredicted RBP19.85■□□□□ 0.77
SEC31A-202ENST00000311785 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
SEC31A-202ENST00000311785 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.76
SEC31A-202ENST00000311785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.74■□□□□ 0.75
SEC31A-202ENST00000311785 YTHDC1Q96MU7 727 aaKnown RBP19.66■□□□□ 0.74
SEC31A-202ENST00000311785 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
SEC31A-202ENST00000311785 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
SEC31A-202ENST00000311785 GTF3C3Q9Y5Q9 886 aa19.54■□□□□ 0.72
SEC31A-202ENST00000311785 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
SEC31A-202ENST00000311785 CENPBP07199 599 aaPredicted RBP19.5■□□□□ 0.71
SEC31A-202ENST00000311785 DIEXFQ68CQ4 756 aaKnown RBP19.44■□□□□ 0.7
SEC31A-202ENST00000311785 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
SEC31A-202ENST00000311785 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
SEC31A-202ENST00000311785 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
SEC31A-202ENST00000311785 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
SEC31A-202ENST00000311785 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.66
SEC31A-202ENST00000311785 MYT1Q01538 1121 aa18.96■□□□□ 0.63
SEC31A-202ENST00000311785 ZNF316A6NFI3 1004 aaPredicted RBP18.95■□□□□ 0.62
SEC31A-202ENST00000311785 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
SEC31A-202ENST00000311785 MIER1Q8N108 512 aa18.91■□□□□ 0.62
SEC31A-202ENST00000311785 APLP2Q06481 763 aa18.9■□□□□ 0.62
SEC31A-202ENST00000311785 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
SEC31A-202ENST00000311785 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
SEC31A-202ENST00000311785 BCANQ96GW7 911 aa18.73■□□□□ 0.59
SEC31A-202ENST00000311785 ITGAEP38570 1179 aa18.71■□□□□ 0.59
SEC31A-202ENST00000311785 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
SEC31A-202ENST00000311785 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
SEC31A-202ENST00000311785 ABCC9O60706 1549 aa18.55■□□□□ 0.56
SEC31A-202ENST00000311785 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
SEC31A-202ENST00000311785 SOGA1O94964 1423 aa18.42■□□□□ 0.54
SEC31A-202ENST00000311785 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
SEC31A-202ENST00000311785 ATP1B4Q9UN42 357 aaPredicted RBP18.39■□□□□ 0.53
SEC31A-202ENST00000311785 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
SEC31A-202ENST00000311785 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.532e-7■■■■□ 22
SEC31A-202ENST00000311785 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
SEC31A-202ENST00000311785 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
SEC31A-202ENST00000311785 NEFLP07196 543 aa18.32■□□□□ 0.52
SEC31A-202ENST00000311785 FKBP8Q14318 412 aa18.32■□□□□ 0.52
SEC31A-202ENST00000311785 HIRIP3Q9BW71 556 aaPredicted RBP18.3■□□□□ 0.52
SEC31A-202ENST00000311785 KCNH8Q96L42 1107 aa18.28■□□□□ 0.52
SEC31A-202ENST00000311785 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
SEC31A-202ENST00000311785 WIZO95785 1651 aa18.26■□□□□ 0.51
SEC31A-202ENST00000311785 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
SEC31A-202ENST00000311785 TNIKQ9UKE5 1360 aa18.24■□□□□ 0.51
SEC31A-202ENST00000311785 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
SEC31A-202ENST00000311785 ERICH6Q7L0X2 663 aa18.23■□□□□ 0.51
SEC31A-202ENST00000311785 TSHZ2Q9NRE2 1034 aa18.22■□□□□ 0.51
SEC31A-202ENST00000311785 ANP32EQ9BTT0 268 aa18.19■□□□□ 0.5
SEC31A-202ENST00000311785 CLIP1P30622 1438 aa18.16■□□□□ 0.5
SEC31A-202ENST00000311785 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
SEC31A-202ENST00000311785 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
SEC31A-202ENST00000311785 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
SEC31A-202ENST00000311785 BCL11AQ9H165 835 aa18.09■□□□□ 0.49
SEC31A-202ENST00000311785 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
SEC31A-202ENST00000311785 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
SEC31A-202ENST00000311785 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
SEC31A-202ENST00000311785 P3H3Q8IVL6 736 aa18.01■□□□□ 0.47
SEC31A-202ENST00000311785 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
SEC31A-202ENST00000311785 ANP32CO43423 234 aa17.96■□□□□ 0.47
SEC31A-202ENST00000311785 CLSPNQ9HAW4 1339 aa17.95■□□□□ 0.46
SEC31A-202ENST00000311785 RBM19Q9Y4C8 960 aaKnown RBP17.94■□□□□ 0.46
SEC31A-202ENST00000311785 DHX57Q6P158 1386 aaKnown RBP17.9■□□□□ 0.46
SEC31A-202ENST00000311785 EEA1Q15075 1411 aa17.88■□□□□ 0.45
SEC31A-202ENST00000311785 HNRNPUQ00839 825 aaKnown RBP eCLIP17.88■□□□□ 0.45
SEC31A-202ENST00000311785 VPS8Q8N3P4 1428 aa17.87■□□□□ 0.45
SEC31A-202ENST00000311785 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
SEC31A-202ENST00000311785 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
SEC31A-202ENST00000311785 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
SEC31A-202ENST00000311785 POLR3GLQ9BT43 218 aa17.85■□□□□ 0.45
SEC31A-202ENST00000311785 CDK11AQ9UQ88 783 aaPredicted RBP17.84■□□□□ 0.45
SEC31A-202ENST00000311785 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
SEC31A-202ENST00000311785 NBR1Q14596 966 aa17.76■□□□□ 0.43
SEC31A-202ENST00000311785 NACADO15069 1562 aa17.75■□□□□ 0.43
SEC31A-202ENST00000311785 FAM9BQ8IZU0 186 aa17.73■□□□□ 0.43
SEC31A-202ENST00000311785 TOP2AP11388 1531 aaKnown RBP17.7■□□□□ 0.42
SEC31A-202ENST00000311785 CCNB3Q8WWL7 1395 aa17.69■□□□□ 0.42
SEC31A-202ENST00000311785 RAB3GAP2Q9H2M9 1393 aa17.68■□□□□ 0.42
SEC31A-202ENST00000311785 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
SEC31A-202ENST00000311785 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
SEC31A-202ENST00000311785 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
SEC31A-202ENST00000311785 ARID3CA6NKF2 412 aa17.63■□□□□ 0.41
SEC31A-202ENST00000311785 CHIC2Q9UKJ5 165 aa17.59■□□□□ 0.41
SEC31A-202ENST00000311785 MSH5O43196 834 aa17.58■□□□□ 0.41
SEC31A-202ENST00000311785 KIF21BO75037 1637 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms