RNA–Protein interactions for RNA: ENST00000465878.6

KIFC3-204, Transcript of kinesin family member C3, humanhuman

TSL 1 (best) BASIC

Gene KIFC3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-204ENST00000465878 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
KIFC3-204ENST00000465878 SHROOM4Q9ULL8 1493 aa25.56■■□□□ 1.68
KIFC3-204ENST00000465878 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
KIFC3-204ENST00000465878 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
KIFC3-204ENST00000465878 ZCCHC6Q5VYS8 1495 aaKnown RBP24.67■■□□□ 1.54
KIFC3-204ENST00000465878 CCDC180Q9P1Z9 1646 aa24.59■■□□□ 1.53
KIFC3-204ENST00000465878 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
KIFC3-204ENST00000465878 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
KIFC3-204ENST00000465878 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
KIFC3-204ENST00000465878 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
KIFC3-204ENST00000465878 LOC105371045A0A1W2PR82 267 aa23.62■■□□□ 1.37
KIFC3-204ENST00000465878 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
KIFC3-204ENST00000465878 ABCC9O60706 1549 aa23.38■■□□□ 1.33
KIFC3-204ENST00000465878 HRCP23327 699 aa23.37■■□□□ 1.33
KIFC3-204ENST00000465878 EHMT2Q96KQ7 1210 aa23.33■■□□□ 1.32
KIFC3-204ENST00000465878 FAM9AQ8IZU1 332 aaPredicted RBP23.31■■□□□ 1.32
KIFC3-204ENST00000465878 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
KIFC3-204ENST00000465878 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
KIFC3-204ENST00000465878 PPARGC1BQ86YN6 1023 aaKnown RBP23.14■■□□□ 1.29
KIFC3-204ENST00000465878 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
KIFC3-204ENST00000465878 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
KIFC3-204ENST00000465878 TRIM26Q12899 539 aaPredicted RBP22.96■■□□□ 1.27
KIFC3-204ENST00000465878 NACADO15069 1562 aa22.9■■□□□ 1.26
KIFC3-204ENST00000465878 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
KIFC3-204ENST00000465878 WIZO95785 1651 aa22.69■■□□□ 1.22
KIFC3-204ENST00000465878 PABPN1Q86U42 306 aaKnown RBP eCLIP22.57■■□□□ 1.2
KIFC3-204ENST00000465878 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
KIFC3-204ENST00000465878 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
KIFC3-204ENST00000465878 ZEB1P37275 1124 aaPredicted RBP22.39■■□□□ 1.18
KIFC3-204ENST00000465878 ABCC8Q09428 1581 aa22.32■■□□□ 1.16
KIFC3-204ENST00000465878 CCDC88BA6NC98 1476 aa22.29■■□□□ 1.16
KIFC3-204ENST00000465878 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.15
KIFC3-204ENST00000465878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.25■■□□□ 1.15
KIFC3-204ENST00000465878 SMARCA4P51532 1647 aa22.23■■□□□ 1.15
KIFC3-204ENST00000465878 TOP2AP11388 1531 aaKnown RBP22.23■■□□□ 1.15
KIFC3-204ENST00000465878 CCER1Q8TC90 406 aaPredicted RBP22.21■■□□□ 1.15
KIFC3-204ENST00000465878 SOGA1O94964 1423 aa22.16■■□□□ 1.14
KIFC3-204ENST00000465878 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
KIFC3-204ENST00000465878 CSRNP3Q8WYN3 585 aa22.11■■□□□ 1.13
KIFC3-204ENST00000465878 UNC13AQ9UPW8 1703 aa22.1■■□□□ 1.13
KIFC3-204ENST00000465878 RANGAP1P46060 587 aaPredicted RBP22.09■■□□□ 1.13
KIFC3-204ENST00000465878 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.13
KIFC3-204ENST00000465878 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
KIFC3-204ENST00000465878 CEP162Q5TB80 1403 aa22.02■■□□□ 1.12
KIFC3-204ENST00000465878 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
KIFC3-204ENST00000465878 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
KIFC3-204ENST00000465878 TNIKQ9UKE5 1360 aa21.9■■□□□ 1.1
KIFC3-204ENST00000465878 PELP1Q8IZL8 1130 aaKnown RBP21.87■■□□□ 1.09
KIFC3-204ENST00000465878 EEA1Q15075 1411 aa21.81■■□□□ 1.08
KIFC3-204ENST00000465878 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
KIFC3-204ENST00000465878 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
KIFC3-204ENST00000465878 GOLGA3Q08378 1498 aa21.78■■□□□ 1.08
KIFC3-204ENST00000465878 APLP2Q06481 763 aa21.78■■□□□ 1.08
KIFC3-204ENST00000465878 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
KIFC3-204ENST00000465878 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
KIFC3-204ENST00000465878 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
KIFC3-204ENST00000465878 CLIP1P30622 1438 aa21.65■■□□□ 1.06
KIFC3-204ENST00000465878 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
KIFC3-204ENST00000465878 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
KIFC3-204ENST00000465878 SCAF1Q9H7N4 1312 aaKnown RBP21.6■■□□□ 1.05
KIFC3-204ENST00000465878 RAPGEF2Q9Y4G8 1499 aa21.56■■□□□ 1.04
KIFC3-204ENST00000465878 VPS8Q8N3P4 1428 aa21.44■■□□□ 1.02
KIFC3-204ENST00000465878 NEUROD1Q13562 356 aa21.43■■□□□ 1.02
KIFC3-204ENST00000465878 ZNF316A6NFI3 1004 aaPredicted RBP21.42■■□□□ 1.02
KIFC3-204ENST00000465878 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
KIFC3-204ENST00000465878 KIF21BO75037 1637 aa21.42■■□□□ 1.02
KIFC3-204ENST00000465878 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
KIFC3-204ENST00000465878 CENPBP07199 599 aaPredicted RBP21.36■■□□□ 1.01
KIFC3-204ENST00000465878 ITGAEP38570 1179 aa21.35■■□□□ 1.01
KIFC3-204ENST00000465878 TOP2BQ02880 1626 aa21.32■■□□□ 1
KIFC3-204ENST00000465878 KANK4Q5T7N3 995 aaPredicted RBP21.31■■□□□ 1
KIFC3-204ENST00000465878 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
KIFC3-204ENST00000465878 NCAPD3P42695 1498 aa21.27■□□□□ 0.99
KIFC3-204ENST00000465878 KIF27Q86VH2 1401 aa21.25■□□□□ 0.99
KIFC3-204ENST00000465878 ATP1B4Q9UN42 357 aaPredicted RBP21.24■□□□□ 0.99
KIFC3-204ENST00000465878 CUX1P39880 1505 aa21.22■□□□□ 0.99
KIFC3-204ENST00000465878 MIER1Q8N108 512 aa21.19■□□□□ 0.98
KIFC3-204ENST00000465878 PRXQ9BXM0 1461 aa21.18■□□□□ 0.98
KIFC3-204ENST00000465878 P3H3Q8IVL6 736 aa21.16■□□□□ 0.98
KIFC3-204ENST00000465878 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
KIFC3-204ENST00000465878 BIVM-ERCC5R4GMW8 1640 aa21.14■□□□□ 0.97
KIFC3-204ENST00000465878 ARAP1Q96P48 1450 aa21.14■□□□□ 0.97
KIFC3-204ENST00000465878 CFTRP13569 1480 aa21.13■□□□□ 0.97
KIFC3-204ENST00000465878 CUX2O14529 1486 aa21.11■□□□□ 0.97
KIFC3-204ENST00000465878 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
KIFC3-204ENST00000465878 MYT1Q01538 1121 aa21.08■□□□□ 0.97
KIFC3-204ENST00000465878 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
KIFC3-204ENST00000465878 IGF1RP08069 1367 aa21.01■□□□□ 0.95
KIFC3-204ENST00000465878 FAM50AQ14320 339 aaKnown RBP21■□□□□ 0.95
KIFC3-204ENST00000465878 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
KIFC3-204ENST00000465878 CARMIL1Q5VZK9 1371 aa21■□□□□ 0.95
KIFC3-204ENST00000465878 ARHGAP35Q9NRY4 1499 aa20.99■□□□□ 0.95
KIFC3-204ENST00000465878 CCNB3Q8WWL7 1395 aa20.97■□□□□ 0.95
KIFC3-204ENST00000465878 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
KIFC3-204ENST00000465878 CLSPNQ9HAW4 1339 aa20.86■□□□□ 0.93
KIFC3-204ENST00000465878 RRBP1Q9P2E9 1410 aaKnown RBP20.85■□□□□ 0.93
KIFC3-204ENST00000465878 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.92
KIFC3-204ENST00000465878 RAD54L2Q9Y4B4 1467 aa20.83■□□□□ 0.92
KIFC3-204ENST00000465878 RAB3GAP2Q9H2M9 1393 aa20.8■□□□□ 0.92
KIFC3-204ENST00000465878 CC2D2AQ9P2K1 1620 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms