Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 DCUN1D2-202ENST00000375403 3164 ntTSL 213.28□□□□□ -0.282e-7■■■□□ 18.2
SND1Q7KZF4 VMP1-213ENST00000591877 791 ntTSL 310.67□□□□□ -0.71e-7■■■□□ 18.2
SND1Q7KZF4 RNASET2-205ENST00000467705 524 ntTSL 510.47□□□□□ -0.736e-9■■■□□ 18.2
SND1Q7KZF4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.01■□□□□ 0.793e-7■■■□□ 18.2
SND1Q7KZF4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.431e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-216ENST00000449311 681 ntTSL 517.68■□□□□ 0.421e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-211ENST00000421589 824 ntTSL 216.71■□□□□ 0.271e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.031e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-210ENST00000420216 668 ntTSL 514.83□□□□□ -0.041e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-208ENST00000414893 528 ntTSL 314.15□□□□□ -0.141e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-214ENST00000435719 817 ntTSL 313.55□□□□□ -0.241e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-209ENST00000417287 610 ntTSL 513.44□□□□□ -0.261e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-207ENST00000414281 772 ntTSL 411.6□□□□□ -0.551e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-202ENST00000372792 1496 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.571e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-204ENST00000372798 1563 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.591e-16■■■□□ 18.2
SND1Q7KZF4 DDX5-214ENST00000580026 1171 ntTSL 210.6□□□□□ -0.711e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-213ENST00000427843 739 ntTSL 510.53□□□□□ -0.721e-16■■■□□ 18.2
SND1Q7KZF4 DDX5-209ENST00000578758 667 ntTSL 210.45□□□□□ -0.741e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.031e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.121e-16■■■□□ 18.2
SND1Q7KZF4 DDX5-216ENST00000581237 592 ntTSL 57.65□□□□□ -1.181e-16■■■□□ 18.2
SND1Q7KZF4 CAP1-212ENST00000424977 702 ntTSL 57.24□□□□□ -1.251e-16■■■□□ 18.2
SND1Q7KZF4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.65e-7■■■□□ 18.1
SND1Q7KZF4 HM13-205ENST00000460225 443 ntTSL 514.26□□□□□ -0.132e-8■■■□□ 18.1
SND1Q7KZF4 HM13-209ENST00000464661 906 ntTSL 312.11□□□□□ -0.479e-9■■■□□ 18.1
SND1Q7KZF4 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.563e-7■■■□□ 18.1
SND1Q7KZF4 LAMB2-205ENST00000467506 689 ntTSL 213.96□□□□□ -0.174e-9■■■□□ 18.1
SND1Q7KZF4 PRCP-211ENST00000531801 936 ntTSL 58.21□□□□□ -1.13e-7■■■□□ 18.1
SND1Q7KZF4 SLC50A1-207ENST00000479579 475 ntTSL 38.62□□□□□ -1.037e-8■■■□□ 18.1
SND1Q7KZF4 PSMB4-206ENST00000495288 986 ntTSL 218.28■□□□□ 0.529e-11■■■□□ 18.1
SND1Q7KZF4 PSMB4-205ENST00000493673 1650 ntTSL 516.52■□□□□ 0.239e-11■■■□□ 18.1
SND1Q7KZF4 PSMB4-207ENST00000495805 811 ntTSL 214.04□□□□□ -0.169e-11■■■□□ 18.1
SND1Q7KZF4 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.219e-11■■■□□ 18.1
SND1Q7KZF4 PSMB4-204ENST00000476467 2067 ntTSL 213.74□□□□□ -0.219e-11■■■□□ 18.1
SND1Q7KZF4 PSMB4-203ENST00000474100 755 ntTSL 57.48□□□□□ -1.219e-11■■■□□ 18.1
SND1Q7KZF4 CTSB-206ENST00000524500 573 ntTSL 419.49■□□□□ 0.718e-34■■■□□ 18.1
SND1Q7KZF4 CTSB-205ENST00000505496 540 ntTSL 49.01□□□□□ -0.978e-34■■■□□ 18.1
SND1Q7KZF4 HLA-C-207ENST00000484378 862 nt29.22■■■□□ 2.273e-9■■■□□ 18.1
SND1Q7KZF4 TM4SF1-204ENST00000493348 976 ntTSL 28.52□□□□□ -1.057e-19■■■□□ 18.1
SND1Q7KZF4 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.077e-19■■■□□ 18.1
SND1Q7KZF4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.932e-9■■■□□ 18.1
SND1Q7KZF4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.6■□□□□ 0.892e-9■■■□□ 18.1
SND1Q7KZF4 TSPAN14-204ENST00000372157 855 ntTSL 520.6■□□□□ 0.892e-9■■■□□ 18.1
SND1Q7KZF4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.792e-9■■■□□ 18.1
SND1Q7KZF4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.35■□□□□ 0.692e-9■■■□□ 18.1
SND1Q7KZF4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.94■□□□□ 0.32e-9■■■□□ 18.1
SND1Q7KZF4 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC11.36□□□□□ -0.592e-9■■■□□ 18.1
SND1Q7KZF4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.232e-9■■■□□ 18.1
SND1Q7KZF4 CLU-217ENST00000560566 1039 ntTSL 414.02□□□□□ -0.177e-14■■■□□ 18.1
SND1Q7KZF4 SC5D-207ENST00000531140 767 ntTSL 1 (best)16.43■□□□□ 0.227e-7■■■□□ 18.1
SND1Q7KZF4 SYVN1-209ENST00000527765 516 ntTSL 313.37□□□□□ -0.272e-8■■■□□ 18.1
SND1Q7KZF4 CLIC2-201ENST00000321926 629 ntTSL 36.85□□□□□ -1.316e-6■■■□□ 18.1
SND1Q7KZF4 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8□□□□□ -1.132e-7■■■□□ 18.1
SND1Q7KZF4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.482e-7■■■□□ 18.1
SND1Q7KZF4 PCMT1-210ENST00000495487 548 ntTSL 315.69■□□□□ 0.11e-9■■■□□ 18.1
SND1Q7KZF4 FCGR2A-214ENST00000536731 571 ntTSL 417.76■□□□□ 0.436e-7■■■□□ 18.1
SND1Q7KZF4 FITM2-201ENST00000396825 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.342e-7■■■□□ 18.1
SND1Q7KZF4 DPAGT1-209ENST00000472016 568 ntTSL 214.1□□□□□ -0.155e-7■■■□□ 18.1
SND1Q7KZF4 CEPT1-205ENST00000476865 783 ntTSL 513.38□□□□□ -0.273e-10■■■□□ 18.1
SND1Q7KZF4 CEPT1-207ENST00000480324 2110 ntTSL 210.63□□□□□ -0.713e-10■■■□□ 18.1
SND1Q7KZF4 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.96□□□□□ -0.972e-6■■■□□ 18.1
SND1Q7KZF4 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -12e-6■■■□□ 18.1
SND1Q7KZF4 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.61□□□□□ -1.032e-6■■■□□ 18.1
SND1Q7KZF4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.89□□□□□ -1.152e-6■■■□□ 18.1
SND1Q7KZF4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.262e-6■■■□□ 18.1
SND1Q7KZF4 AP2B1-219ENST00000620039 3428 ntTSL 1 (best)6.45□□□□□ -1.382e-6■■■□□ 18.1
SND1Q7KZF4 PLOD1-208ENST00000485046 991 ntTSL 514.94□□□□□ -0.025e-10■■■□□ 18.1
SND1Q7KZF4 LAMC1-206ENST00000495918 672 ntTSL 27.97□□□□□ -1.134e-7■■■□□ 18.1
SND1Q7KZF4 PLD3-220ENST00000599353 332 ntTSL 317.31■□□□□ 0.368e-8■■■□□ 18
SND1Q7KZF4 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.123e-11■■■□□ 18
SND1Q7KZF4 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.383e-11■■■□□ 18
SND1Q7KZF4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.81□□□□□ -1.163e-11■■■□□ 18
SND1Q7KZF4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.247e-7■■■□□ 18
SND1Q7KZF4 COL9A2-207ENST00000482722 2887 ntTSL 1 (best)15.96■□□□□ 0.157e-7■■■□□ 18
SND1Q7KZF4 NOMO2-208ENST00000569051 901 ntTSL 58.29□□□□□ -1.085e-9■■■□□ 18
SND1Q7KZF4 MCAM-211ENST00000529295 757 ntTSL 419.66■□□□□ 0.748e-8■■■□□ 18
SND1Q7KZF4 MCAM-215ENST00000530706 541 ntTSL 415.65■□□□□ 0.18e-8■■■□□ 18
SND1Q7KZF4 MCAM-210ENST00000529257 563 ntTSL 514.75□□□□□ -0.058e-8■■■□□ 18
SND1Q7KZF4 HSD17B12-209ENST00000533802 511 ntTSL 36.27□□□□□ -1.414e-8■■■□□ 18
SND1Q7KZF4 PDCD6IP-217ENST00000498147 802 ntTSL 319.2■□□□□ 0.663e-8■■■□□ 18
SND1Q7KZF4 PDCD6IP-203ENST00000413073 566 ntTSL 419.15■□□□□ 0.663e-8■■■□□ 18
SND1Q7KZF4 PDCD6IP-204ENST00000430877 582 ntTSL 316.68■□□□□ 0.263e-8■■■□□ 18
SND1Q7KZF4 PDCD6IP-205ENST00000435909 587 ntTSL 516.51■□□□□ 0.233e-8■■■□□ 18
SND1Q7KZF4 PDCD6IP-210ENST00000477798 587 ntTSL 415.09■□□□□ 0.013e-8■■■□□ 18
SND1Q7KZF4 PDCD6IP-212ENST00000484478 596 ntTSL 46.51□□□□□ -1.373e-8■■■□□ 18
SND1Q7KZF4 NEU1-208ENST00000491768 1875 ntTSL 520.58■□□□□ 0.894e-7■■■□□ 18
SND1Q7KZF4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.694e-7■■■□□ 18
SND1Q7KZF4 NEU1-207ENST00000480384 2214 ntTSL 219.06■□□□□ 0.644e-7■■■□□ 18
SND1Q7KZF4 NEU1-209ENST00000495807 4616 ntTSL 214.6□□□□□ -0.074e-7■■■□□ 18
SND1Q7KZF4 CANX-211ENST00000506298 549 ntTSL 26.52□□□□□ -1.373e-24■■■□□ 18
SND1Q7KZF4 CLSTN3-208ENST00000538933 583 ntTSL 312.78□□□□□ -0.362e-8■■■□□ 18
SND1Q7KZF4 C4A-255ENST00000483974 465 ntTSL 221.36■■□□□ 1.011e-323■■■□□ 18
SND1Q7KZF4 C4A-258ENST00000496659 567 ntTSL 210.43□□□□□ -0.741e-323■■■□□ 18
SND1Q7KZF4 FCGR2A-205ENST00000467525 1642 ntTSL 510.4□□□□□ -0.746e-7■■■□□ 18
SND1Q7KZF4 G6PC-202ENST00000585489 1097 ntTSL 5 BASIC11.07□□□□□ -0.641e-6■■■□□ 18
SND1Q7KZF4 G6PC-204ENST00000592383 987 ntTSL 2 BASIC9.44□□□□□ -0.91e-6■■■□□ 18
SND1Q7KZF4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.171e-6■■■□□ 18
SND1Q7KZF4 PLOD1-204ENST00000449038 762 ntTSL 517.66■□□□□ 0.421e-10■■■□□ 18
SND1Q7KZF4 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.538e-7■■■□□ 18
SND1Q7KZF4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.982e-8■■■□□ 18
Retrieved 100 of 13,567 protein–RNA pairs in 131.2 ms